RNA–Protein interactions for RNA: ENST00000568507.5

CCNDBP1-213, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-213ENST00000568507 TRIM34Q9BYJ4 488 aa18.26■□□□□ 0.51
CCNDBP1-213ENST00000568507 HERC5Q9UII4 1024 aaKnown RBP18.26■□□□□ 0.51
CCNDBP1-213ENST00000568507 COG6Q9Y2V7 657 aa18.26■□□□□ 0.51
CCNDBP1-213ENST00000568507 COL2A1P02458 1487 aaPredicted RBP18.25■□□□□ 0.51
CCNDBP1-213ENST00000568507 HMMRO75330 724 aa18.25■□□□□ 0.51
CCNDBP1-213ENST00000568507 ADGRA1Q86SQ6 560 aa18.25■□□□□ 0.51
CCNDBP1-213ENST00000568507 CCDC84Q86UT8 332 aaPredicted RBP18.25■□□□□ 0.51
CCNDBP1-213ENST00000568507 RHPN1Q8TCX5 695 aa18.25■□□□□ 0.51
CCNDBP1-213ENST00000568507 TBC1D2Q9BYX2 928 aa18.25■□□□□ 0.51
CCNDBP1-213ENST00000568507 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.25■□□□□ 0.51
CCNDBP1-213ENST00000568507 RCAN3Q9UKA8 241 aa18.25■□□□□ 0.51
CCNDBP1-213ENST00000568507 SLC45A1Q9Y2W3 748 aa18.25■□□□□ 0.51
CCNDBP1-213ENST00000568507 CAP2P40123 477 aa18.24■□□□□ 0.51
CCNDBP1-213ENST00000568507 MAP3K12Q12852 859 aa18.24■□□□□ 0.51
CCNDBP1-213ENST00000568507 SLC4A8Q2Y0W8 1093 aa18.24■□□□□ 0.51
CCNDBP1-213ENST00000568507 CRACR2BQ8N4Y2 399 aaPredicted RBP18.24■□□□□ 0.51
CCNDBP1-213ENST00000568507 TRIM47Q96LD4 638 aa18.24■□□□□ 0.51
CCNDBP1-213ENST00000568507 IL1RAPL2Q9NP60 686 aa18.24■□□□□ 0.51
CCNDBP1-213ENST00000568507 SRRDQ9UH36 339 aa18.24■□□□□ 0.51
CCNDBP1-213ENST00000568507 ADGRA2Q96PE1 1338 aa18.24■□□□□ 0.51
CCNDBP1-213ENST00000568507 TNRC18O15417 2968 aaPredicted RBP18.24■□□□□ 0.51
CCNDBP1-213ENST00000568507 DOCK2Q92608 1830 aa18.24■□□□□ 0.51
CCNDBP1-213ENST00000568507 USP17L5A8MUK1 530 aa18.23■□□□□ 0.51
CCNDBP1-213ENST00000568507 APBB1O00213 710 aa18.23■□□□□ 0.51
CCNDBP1-213ENST00000568507 DYNLL1P63167 89 aaKnown RBP18.23■□□□□ 0.51
CCNDBP1-213ENST00000568507 SPP2Q13103 211 aa18.23■□□□□ 0.51
CCNDBP1-213ENST00000568507 CERS3Q8IU89 383 aa18.23■□□□□ 0.51
CCNDBP1-213ENST00000568507 FOXP4Q8IVH2 680 aaPredicted RBP18.23■□□□□ 0.51
CCNDBP1-213ENST00000568507 CLASRPQ8N2M8 674 aaKnown RBP18.23■□□□□ 0.51
CCNDBP1-213ENST00000568507 ZNF280CQ8ND82 737 aa18.23■□□□□ 0.51
CCNDBP1-213ENST00000568507 RAET1EQ8TD07 263 aa18.23■□□□□ 0.51
CCNDBP1-213ENST00000568507 SMCR8Q8TEV9 937 aaPredicted RBP18.23■□□□□ 0.51
CCNDBP1-213ENST00000568507 SH3TC2Q8TF17 1288 aa18.23■□□□□ 0.51
CCNDBP1-213ENST00000568507 KIF1BPQ96EK5 621 aa18.23■□□□□ 0.51
CCNDBP1-213ENST00000568507 BCL11AQ9H165 835 aa18.23■□□□□ 0.51
CCNDBP1-213ENST00000568507 AS3MTQ9HBK9 375 aa18.23■□□□□ 0.51
CCNDBP1-213ENST00000568507 FLT1P17948 1338 aa18.23■□□□□ 0.51
CCNDBP1-213ENST00000568507 MYCP01106 439 aaPredicted RBP18.22■□□□□ 0.51
CCNDBP1-213ENST00000568507 HLA-DOAP06340 250 aa18.22■□□□□ 0.51
CCNDBP1-213ENST00000568507 BCRP11274 1271 aa18.22■□□□□ 0.51
CCNDBP1-213ENST00000568507 EN2P19622 333 aaPredicted RBP18.22■□□□□ 0.51
CCNDBP1-213ENST00000568507 FCGRTP55899 365 aa18.22■□□□□ 0.51
CCNDBP1-213ENST00000568507 MAGEB6Q8N7X4 407 aa18.22■□□□□ 0.51
CCNDBP1-213ENST00000568507 ZBTB40Q9NUA8 1239 aa18.22■□□□□ 0.51
CCNDBP1-213ENST00000568507 SAP30BPQ9UHR5 308 aaKnown RBP18.22■□□□□ 0.51
CCNDBP1-213ENST00000568507 PNMA3Q9UL41 463 aa18.22■□□□□ 0.51
CCNDBP1-213ENST00000568507 PALD1Q9ULE6 856 aa18.22■□□□□ 0.51
CCNDBP1-213ENST00000568507 AGTPBP1Q9UPW5 1226 aa18.22■□□□□ 0.51
CCNDBP1-213ENST00000568507 NDUFB9Q9Y6M9 179 aa18.22■□□□□ 0.51
CCNDBP1-213ENST00000568507 IFIT2P09913 472 aaKnown RBP18.21■□□□□ 0.51
CCNDBP1-213ENST00000568507 OSBPP22059 807 aa18.21■□□□□ 0.51
CCNDBP1-213ENST00000568507 CTGFP29279 349 aa18.21■□□□□ 0.51
CCNDBP1-213ENST00000568507 USP5P45974 858 aa18.21■□□□□ 0.51
CCNDBP1-213ENST00000568507 PRPF38BQ5VTL8 546 aaKnown RBP18.21■□□□□ 0.51
CCNDBP1-213ENST00000568507 TMED8Q6PL24 325 aaPredicted RBP18.21■□□□□ 0.51
CCNDBP1-213ENST00000568507 MIGA1Q8NAN2 632 aa18.21■□□□□ 0.51
CCNDBP1-213ENST00000568507 PROCA1Q8NCQ7 364 aaPredicted RBP18.21■□□□□ 0.51
CCNDBP1-213ENST00000568507 MYPNQ86TC9 1320 aa18.21■□□□□ 0.51
CCNDBP1-213ENST00000568507 HTTP42858 3142 aa18.21■□□□□ 0.51
CCNDBP1-213ENST00000568507 RAB11FIP3O75154 756 aa18.2■□□□□ 0.5
CCNDBP1-213ENST00000568507 PABPC4Q13310 644 aaKnown RBP eCLIP18.2■□□□□ 0.53e-14■□□□□ 8.1
CCNDBP1-213ENST00000568507 RRP1BQ14684 758 aaKnown RBP18.2■□□□□ 0.5
CCNDBP1-213ENST00000568507 TTF1Q15361 905 aaPredicted RBP18.2■□□□□ 0.5
CCNDBP1-213ENST00000568507 ANTXR1Q9H6X2 564 aa18.2■□□□□ 0.5
CCNDBP1-213ENST00000568507 ASNSP08243 561 aa18.19■□□□□ 0.5
CCNDBP1-213ENST00000568507 HMGCS2P54868 508 aa18.19■□□□□ 0.5
CCNDBP1-213ENST00000568507 TREML2Q5T2D2 321 aa18.19■□□□□ 0.5
CCNDBP1-213ENST00000568507 GRK4P32298 578 aa18.18■□□□□ 0.5
CCNDBP1-213ENST00000568507 METTL16Q86W50 562 aaKnown RBP18.18■□□□□ 0.5
CCNDBP1-213ENST00000568507 SIRT2Q8IXJ6 389 aa18.18■□□□□ 0.5
CCNDBP1-213ENST00000568507 GINM1Q9NU53 330 aa18.18■□□□□ 0.5
CCNDBP1-213ENST00000568507 BIN2Q9UBW5 565 aaPredicted RBP18.18■□□□□ 0.5
CCNDBP1-213ENST00000568507 PRKCZQ05513 592 aa18.17■□□□□ 0.5
CCNDBP1-213ENST00000568507 ANKRD13CQ8N6S4 541 aa18.17■□□□□ 0.5
CCNDBP1-213ENST00000568507 DNAJC2Q99543 621 aaKnown RBP18.17■□□□□ 0.5
CCNDBP1-213ENST00000568507 WDR18Q9BV38 432 aa18.17■□□□□ 0.5
CCNDBP1-213ENST00000568507 TMOD4Q9NZQ9 345 aa18.17■□□□□ 0.5
CCNDBP1-213ENST00000568507 DOCK1Q14185 1865 aa18.17■□□□□ 0.5
CCNDBP1-213ENST00000568507 TNPO2O14787 897 aaKnown RBP18.17■□□□□ 0.5
CCNDBP1-213ENST00000568507 GDF11O95390 407 aa18.17■□□□□ 0.5
CCNDBP1-213ENST00000568507 PDE3AQ14432 1141 aa18.17■□□□□ 0.5
CCNDBP1-213ENST00000568507 SH3D19Q5HYK7 790 aa18.17■□□□□ 0.5
CCNDBP1-213ENST00000568507 SLC9C2Q5TAH2 1124 aa18.17■□□□□ 0.5
CCNDBP1-213ENST00000568507 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.17■□□□□ 0.5
CCNDBP1-213ENST00000568507 DNAJC18Q9H819 358 aa18.17■□□□□ 0.5
CCNDBP1-213ENST00000568507 CENPFP49454 3210 aa18.16■□□□□ 0.5
CCNDBP1-213ENST00000568507 GCLCP48506 637 aaPredicted RBP18.16■□□□□ 0.5
CCNDBP1-213ENST00000568507 BACE1P56817 501 aa18.16■□□□□ 0.5
CCNDBP1-213ENST00000568507 UBXN2AP68543 259 aa18.16■□□□□ 0.5
CCNDBP1-213ENST00000568507 TTC6Q86TZ1 520 aa18.16■□□□□ 0.5
CCNDBP1-213ENST00000568507 GABRQQ9UN88 632 aa18.16■□□□□ 0.5
CCNDBP1-213ENST00000568507 MAST2Q6P0Q8 1798 aa18.15■□□□□ 0.5
CCNDBP1-213ENST00000568507 MAGEB6P1A0A0J9YX57 407 aa18.15■□□□□ 0.5
CCNDBP1-213ENST00000568507 C19orf81C9J6K1 198 aa18.15■□□□□ 0.5
CCNDBP1-213ENST00000568507 USP17L10C9JJH3 530 aa18.15■□□□□ 0.5
CCNDBP1-213ENST00000568507 GOLIM4O00461 696 aa18.15■□□□□ 0.5
CCNDBP1-213ENST00000568507 MTMR2Q13614 643 aa18.15■□□□□ 0.5
CCNDBP1-213ENST00000568507 SLAIN1Q8ND83 568 aa18.15■□□□□ 0.5
CCNDBP1-213ENST00000568507 COA7Q96BR5 231 aa18.15■□□□□ 0.5
CCNDBP1-213ENST00000568507 ASCC2Q9H1I8 757 aaPredicted RBP18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms