RNA–Protein interactions for RNA: ENST00000568290.1

ATXN3-250, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 671 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-250ENST00000568290 IRS4O14654 1257 aaPredicted RBP8.76□□□□□ -1.01
ATXN3-250ENST00000568290 IFIT3O14879 490 aaKnown RBP8.76□□□□□ -1.01
ATXN3-250ENST00000568290 ARHGAP6O43182 974 aa8.76□□□□□ -1.01
ATXN3-250ENST00000568290 TOP1P11387 765 aaKnown RBP8.76□□□□□ -1.01
ATXN3-250ENST00000568290 IFNAR1P17181 557 aa8.76□□□□□ -1.01
ATXN3-250ENST00000568290 CDK11BP21127 795 aaKnown RBP8.76□□□□□ -1.01
ATXN3-250ENST00000568290 ITGA6P23229 1130 aa8.76□□□□□ -1.01
ATXN3-250ENST00000568290 ERCC5P28715 1186 aaPredicted RBP8.76□□□□□ -1.01
ATXN3-250ENST00000568290 HOXA7P31268 230 aaPredicted RBP8.76□□□□□ -1.01
ATXN3-250ENST00000568290 ZAP70P43403 619 aa8.76□□□□□ -1.01
ATXN3-250ENST00000568290 UBASH3AP57075 661 aa8.76□□□□□ -1.01
ATXN3-250ENST00000568290 GPS2Q13227 327 aa8.76□□□□□ -1.01
ATXN3-250ENST00000568290 LRRC24Q50LG9 513 aa8.76□□□□□ -1.01
ATXN3-250ENST00000568290 TMEM67Q5HYA8 995 aa8.76□□□□□ -1.01
ATXN3-250ENST00000568290 TYW1BQ6NUM6 668 aa8.76□□□□□ -1.01
ATXN3-250ENST00000568290 NYAP1Q6ZVC0 841 aa8.76□□□□□ -1.01
ATXN3-250ENST00000568290 NUTM2AQ8IVF1 878 aaPredicted RBP8.76□□□□□ -1.01
ATXN3-250ENST00000568290 DHX40Q8IX18 779 aaKnown RBP8.76□□□□□ -1.01
ATXN3-250ENST00000568290 KRT222Q8N1A0 295 aa8.76□□□□□ -1.01
ATXN3-250ENST00000568290 MNS1Q8NEH6 495 aa8.76□□□□□ -1.01
ATXN3-250ENST00000568290 SMARCE1Q969G3 411 aa8.76□□□□□ -1.01
ATXN3-250ENST00000568290 RBM33Q96EV2 1170 aaKnown RBP8.76□□□□□ -1.01
ATXN3-250ENST00000568290 LRRC2Q9BYS8 371 aa8.76□□□□□ -1.01
ATXN3-250ENST00000568290 ZMYND15Q9H091 742 aa8.76□□□□□ -1.01
ATXN3-250ENST00000568290 TRMT112Q9UI30 125 aaKnown RBP8.76□□□□□ -1.01
ATXN3-250ENST00000568290 ZNF652Q9Y2D9 606 aa8.76□□□□□ -1.01
ATXN3-250ENST00000568290 RIPOR2Q9Y4F9 1068 aa8.76□□□□□ -1.01
ATXN3-250ENST00000568290 SOS2Q07890 1332 aaPredicted RBP8.76□□□□□ -1.01
ATXN3-250ENST00000568290 PNPLA7Q6ZV29 1317 aa8.76□□□□□ -1.01
ATXN3-250ENST00000568290 UBR2Q8IWV8 1755 aa8.76□□□□□ -1.01
ATXN3-250ENST00000568290 KCPQ6ZWJ8 1503 aa8.75□□□□□ -1.01
ATXN3-250ENST00000568290 GRXCR2A6NFK2 248 aa8.75□□□□□ -1.01
ATXN3-250ENST00000568290 GPR37O15354 613 aa8.75□□□□□ -1.01
ATXN3-250ENST00000568290 IDH1O75874 414 aaKnown RBP8.75□□□□□ -1.01
ATXN3-250ENST00000568290 FMNL1O95466 1100 aaPredicted RBP8.75□□□□□ -1.01
ATXN3-250ENST00000568290 A1BGP04217 495 aa8.75□□□□□ -1.01
ATXN3-250ENST00000568290 PFKFB1P16118 471 aa8.75□□□□□ -1.01
ATXN3-250ENST00000568290 NDUFA8P51970 172 aa8.75□□□□□ -1.01
ATXN3-250ENST00000568290 EMP3P54852 163 aa8.75□□□□□ -1.01
ATXN3-250ENST00000568290 FANCCQ00597 558 aa8.75□□□□□ -1.01
ATXN3-250ENST00000568290 EN1Q05925 392 aaPredicted RBP8.75□□□□□ -1.01
ATXN3-250ENST00000568290 SPAG1Q07617 926 aa8.75□□□□□ -1.01
ATXN3-250ENST00000568290 TRIM14Q14142 442 aa8.75□□□□□ -1.01
ATXN3-250ENST00000568290 WTAPQ15007 396 aa8.75□□□□□ -1.01
ATXN3-250ENST00000568290 CHRNA2Q15822 529 aa8.75□□□□□ -1.01
ATXN3-250ENST00000568290 CFAP100Q494V2 611 aa8.75□□□□□ -1.01
ATXN3-250ENST00000568290 CCDC152Q4G0S7 254 aa8.75□□□□□ -1.01
ATXN3-250ENST00000568290 AKNAD1Q5T1N1 836 aa8.75□□□□□ -1.01
ATXN3-250ENST00000568290 RESP18Q5W5W9 173 aa8.75□□□□□ -1.01
ATXN3-250ENST00000568290 KRT40Q6A162 431 aa8.75□□□□□ -1.01
ATXN3-250ENST00000568290 APOA5Q6Q788 366 aa8.75□□□□□ -1.01
ATXN3-250ENST00000568290 POTEEQ6S8J3 1075 aa8.75□□□□□ -1.01
ATXN3-250ENST00000568290 C11orf57Q6ZUT1 292 aaPredicted RBP8.75□□□□□ -1.01
ATXN3-250ENST00000568290 TMC6Q7Z403 805 aa8.75□□□□□ -1.01
ATXN3-250ENST00000568290 VPS37DQ86XT2 251 aa8.75□□□□□ -1.01
ATXN3-250ENST00000568290 NOSTRINQ8IVI9 506 aa8.75□□□□□ -1.01
ATXN3-250ENST00000568290 ZNF454Q8N9F8 522 aa8.75□□□□□ -1.01
ATXN3-250ENST00000568290 ZNF592Q92610 1267 aa8.75□□□□□ -1.01
ATXN3-250ENST00000568290 ESR2Q92731 530 aa8.75□□□□□ -1.01
ATXN3-250ENST00000568290 FERMT2Q96AC1 680 aa8.75□□□□□ -1.01
ATXN3-250ENST00000568290 UBAC1Q9BSL1 405 aa8.75□□□□□ -1.01
ATXN3-250ENST00000568290 NCOA5Q9HCD5 579 aaKnown RBP8.75□□□□□ -1.01
ATXN3-250ENST00000568290 PAPPAQ13219 1627 aa8.75□□□□□ -1.01
ATXN3-250ENST00000568290 NUP188Q5SRE5 1749 aa8.74□□□□□ -1.01
ATXN3-250ENST00000568290 RGPD5Q99666 1765 aa8.74□□□□□ -1.01
ATXN3-250ENST00000568290 A0A1B0GVL5 298 aa8.74□□□□□ -1.01
ATXN3-250ENST00000568290 AP5Z1O43299 807 aa8.74□□□□□ -1.01
ATXN3-250ENST00000568290 STX10O60499 249 aa8.74□□□□□ -1.01
ATXN3-250ENST00000568290 POLR3DP05423 398 aaPredicted RBP8.74□□□□□ -1.01
ATXN3-250ENST00000568290 FDPSP14324 419 aaKnown RBP8.74□□□□□ -1.01
ATXN3-250ENST00000568290 TXLNAP40222 546 aa8.74□□□□□ -1.01
ATXN3-250ENST00000568290 PPP1R2P41236 205 aa8.74□□□□□ -1.01
ATXN3-250ENST00000568290 TDO2P48775 406 aa8.74□□□□□ -1.01
ATXN3-250ENST00000568290 DMTNQ08495 405 aa8.74□□□□□ -1.01
ATXN3-250ENST00000568290 RTN1Q16799 776 aa8.74□□□□□ -1.01
ATXN3-250ENST00000568290 KRBA2Q6ZNG9 492 aa8.74□□□□□ -1.01
ATXN3-250ENST00000568290 NLRP10Q86W26 655 aa8.74□□□□□ -1.01
ATXN3-250ENST00000568290 IQCA1Q86XH1 822 aa8.74□□□□□ -1.01
ATXN3-250ENST00000568290 CERS3Q8IU89 383 aa8.74□□□□□ -1.01
ATXN3-250ENST00000568290 TTLL11Q8NHH1 800 aa8.74□□□□□ -1.01
ATXN3-250ENST00000568290 ENOX1Q8TC92 643 aaKnown RBP8.74□□□□□ -1.01
ATXN3-250ENST00000568290 STAG1Q8WVM7 1258 aa8.74□□□□□ -1.01
ATXN3-250ENST00000568290 UBXN4Q92575 508 aa8.74□□□□□ -1.01
ATXN3-250ENST00000568290 FBXW7Q969H0 707 aa8.74□□□□□ -1.01
ATXN3-250ENST00000568290 ZDHHC16Q969W1 377 aa8.74□□□□□ -1.01
ATXN3-250ENST00000568290 CCDC51Q96ER9 411 aa8.74□□□□□ -1.01
ATXN3-250ENST00000568290 RNF26Q9BY78 433 aaPredicted RBP8.74□□□□□ -1.01
ATXN3-250ENST00000568290 ADAM33Q9BZ11 813 aa8.74□□□□□ -1.01
ATXN3-250ENST00000568290 GOLPH3LQ9H4A5 285 aa8.74□□□□□ -1.01
ATXN3-250ENST00000568290 RMND1Q9NWS8 449 aa8.74□□□□□ -1.01
ATXN3-250ENST00000568290 IFNKQ9P0W0 207 aa8.74□□□□□ -1.01
ATXN3-250ENST00000568290 KCNH3Q9ULD8 1083 aa8.74□□□□□ -1.01
ATXN3-250ENST00000568290 HPSEQ9Y251 543 aa8.74□□□□□ -1.01
ATXN3-250ENST00000568290 COL5A2P05997 1499 aaPredicted RBP8.74□□□□□ -1.01
ATXN3-250ENST00000568290 EXOC5O00471 708 aa8.73□□□□□ -1.01
ATXN3-250ENST00000568290 PDE6AP16499 860 aa8.73□□□□□ -1.01
ATXN3-250ENST00000568290 HMGB2P26583 209 aaKnown RBP8.73□□□□□ -1.01
ATXN3-250ENST00000568290 TRAPPC10P48553 1259 aa8.73□□□□□ -1.01
ATXN3-250ENST00000568290 ETF1P62495 437 aaKnown RBP8.73□□□□□ -1.01
ATXN3-250ENST00000568290 GUCY1B3Q02153 619 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms