RNA–Protein interactions for RNA: ENST00000567654.1

SF3B3-210, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 334 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-210ENST00000567654 ALDH16A1Q8IZ83 802 aa7.12□□□□□ -1.27
SF3B3-210ENST00000567654 ACSBG1Q96GR2 724 aa7.12□□□□□ -1.27
SF3B3-210ENST00000567654 MYD88Q99836 296 aa7.12□□□□□ -1.27
SF3B3-210ENST00000567654 EXOC6BQ9Y2D4 811 aa7.12□□□□□ -1.27
SF3B3-210ENST00000567654 THRAP3Q9Y2W1 955 aaKnown RBP7.12□□□□□ -1.27
SF3B3-210ENST00000567654 CHMP3Q9Y3E7 222 aa7.12□□□□□ -1.27
SF3B3-210ENST00000567654 CCDC9Q9Y3X0 531 aaKnown RBP7.12□□□□□ -1.27
SF3B3-210ENST00000567654 MYH7P12883 1935 aa7.11□□□□□ -1.27
SF3B3-210ENST00000567654 IBTKQ9P2D0 1353 aaPredicted RBP7.11□□□□□ -1.27
SF3B3-210ENST00000567654 UTYO14607 1347 aa7.11□□□□□ -1.27
SF3B3-210ENST00000567654 ERBB4Q15303 1308 aa7.11□□□□□ -1.27
SF3B3-210ENST00000567654 SPATA31A6Q5VVP1 1343 aa7.11□□□□□ -1.27
SF3B3-210ENST00000567654 SALL3Q9BXA9 1300 aa7.11□□□□□ -1.27
SF3B3-210ENST00000567654 NEURL1BA8MQ27 555 aa7.11□□□□□ -1.27
SF3B3-210ENST00000567654 GPR25O00155 361 aa7.11□□□□□ -1.27
SF3B3-210ENST00000567654 ALDH1L1O75891 902 aa7.11□□□□□ -1.27
SF3B3-210ENST00000567654 GSPT1P15170 499 aaKnown RBP7.11□□□□□ -1.27
SF3B3-210ENST00000567654 VPS72Q15906 364 aa7.11□□□□□ -1.27
SF3B3-210ENST00000567654 BICDL1Q6ZP65 573 aa7.11□□□□□ -1.27
SF3B3-210ENST00000567654 PPP1R42Q7Z4L9 355 aa7.11□□□□□ -1.27
SF3B3-210ENST00000567654 GPR161Q8N6U8 529 aaKnown RBP7.11□□□□□ -1.27
SF3B3-210ENST00000567654 JARID2Q92833 1246 aaPredicted RBP7.11□□□□□ -1.27
SF3B3-210ENST00000567654 ZNF837Q96EG3 531 aaPredicted RBP7.11□□□□□ -1.27
SF3B3-210ENST00000567654 SUCLG2Q96I99 432 aa7.11□□□□□ -1.27
SF3B3-210ENST00000567654 HSH2DQ96JZ2 352 aa7.11□□□□□ -1.27
SF3B3-210ENST00000567654 METTL22Q9BUU2 404 aaPredicted RBP7.11□□□□□ -1.27
SF3B3-210ENST00000567654 SEPT3Q9UH03 358 aa7.11□□□□□ -1.27
SF3B3-210ENST00000567654 USTQ9Y2C2 406 aa7.11□□□□□ -1.27
SF3B3-210ENST00000567654 UBR3Q6ZT12 1888 aa7.11□□□□□ -1.27
SF3B3-210ENST00000567654 ATRNO75882 1429 aa7.1□□□□□ -1.27
SF3B3-210ENST00000567654 A0A1W2PNR3 127 aa7.1□□□□□ -1.27
SF3B3-210ENST00000567654 H3BM21 787 aa7.1□□□□□ -1.27
SF3B3-210ENST00000567654 KCNQ2O43526 872 aa7.1□□□□□ -1.27
SF3B3-210ENST00000567654 DDX58O95786 925 aaKnown RBP7.1□□□□□ -1.27
SF3B3-210ENST00000567654 EPHA10Q5JZY3 1008 aa7.1□□□□□ -1.27
SF3B3-210ENST00000567654 PTF1AQ7RTS3 328 aa7.1□□□□□ -1.27
SF3B3-210ENST00000567654 LINS1Q8NG48 757 aa7.1□□□□□ -1.27
SF3B3-210ENST00000567654 RHPN1Q8TCX5 695 aa7.1□□□□□ -1.27
SF3B3-210ENST00000567654 SSH3Q8TE77 659 aa7.1□□□□□ -1.27
SF3B3-210ENST00000567654 C7orf43Q8WVR3 580 aa7.1□□□□□ -1.27
SF3B3-210ENST00000567654 VTI1AQ96AJ9 217 aa7.1□□□□□ -1.27
SF3B3-210ENST00000567654 SYTL4Q96C24 671 aaPredicted RBP7.1□□□□□ -1.27
SF3B3-210ENST00000567654 ZIC5Q96T25 663 aa7.1□□□□□ -1.27
SF3B3-210ENST00000567654 SAP130Q9H0E3 1048 aa7.1□□□□□ -1.27
SF3B3-210ENST00000567654 BCL11AQ9H165 835 aa7.1□□□□□ -1.27
SF3B3-210ENST00000567654 QTRT2Q9H974 415 aaKnown RBP7.1□□□□□ -1.27
SF3B3-210ENST00000567654 USP21Q9UK80 565 aa7.1□□□□□ -1.27
SF3B3-210ENST00000567654 COL24A1Q17RW2 1714 aa7.1□□□□□ -1.27
SF3B3-210ENST00000567654 COL4A1P02462 1669 aa7.09□□□□□ -1.27
SF3B3-210ENST00000567654 AFF2P51816 1311 aa7.09□□□□□ -1.27
SF3B3-210ENST00000567654 GRM8O00222 908 aa7.09□□□□□ -1.27
SF3B3-210ENST00000567654 SSFA2P28290 1259 aa7.09□□□□□ -1.27
SF3B3-210ENST00000567654 CASP7P55210 303 aa7.09□□□□□ -1.27
SF3B3-210ENST00000567654 NFX1Q12986 1120 aaKnown RBP7.09□□□□□ -1.27
SF3B3-210ENST00000567654 GCKRQ14397 625 aa7.09□□□□□ -1.27
SF3B3-210ENST00000567654 POTEAQ6S8J7 498 aa7.09□□□□□ -1.27
SF3B3-210ENST00000567654 LRRC69Q6ZNQ3 347 aa7.09□□□□□ -1.27
SF3B3-210ENST00000567654 STAG2Q8N3U4 1231 aa7.09□□□□□ -1.27
SF3B3-210ENST00000567654 ZNF280CQ8ND82 737 aa7.09□□□□□ -1.27
SF3B3-210ENST00000567654 GTPBP3Q969Y2 492 aaKnown RBP7.09□□□□□ -1.27
SF3B3-210ENST00000567654 CHMP4AQ9BY43 222 aa7.09□□□□□ -1.27
SF3B3-210ENST00000567654 NUCKS1Q9H1E3 243 aaKnown RBP7.09□□□□□ -1.27
SF3B3-210ENST00000567654 BICC1Q9H694 974 aaKnown RBP7.09□□□□□ -1.27
SF3B3-210ENST00000567654 ZDHHC3Q9NYG2 299 aa7.09□□□□□ -1.27
SF3B3-210ENST00000567654 KLK14Q9P0G3 267 aa7.09□□□□□ -1.27
SF3B3-210ENST00000567654 PA2G4Q9UQ80 394 aaKnown RBP7.09□□□□□ -1.27
SF3B3-210ENST00000567654 ZBTB1Q9Y2K1 713 aa7.09□□□□□ -1.27
SF3B3-210ENST00000567654 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.09□□□□□ -1.27
SF3B3-210ENST00000567654 ARAP2Q8WZ64 1704 aa7.09□□□□□ -1.27
SF3B3-210ENST00000567654 EP400Q96L91 3159 aa7.08□□□□□ -1.28
SF3B3-210ENST00000567654 AKAP11Q9UKA4 1901 aa7.08□□□□□ -1.28
SF3B3-210ENST00000567654 SRGAP3O43295 1099 aa7.08□□□□□ -1.28
SF3B3-210ENST00000567654 HMMRO75330 724 aa7.08□□□□□ -1.28
SF3B3-210ENST00000567654 CYP19A1P11511 503 aaPredicted RBP7.08□□□□□ -1.28
SF3B3-210ENST00000567654 HIRAP54198 1017 aaPredicted RBP7.08□□□□□ -1.28
SF3B3-210ENST00000567654 MTX1Q13505 466 aa7.08□□□□□ -1.28
SF3B3-210ENST00000567654 ITPK1Q13572 414 aa7.08□□□□□ -1.28
SF3B3-210ENST00000567654 FAM182BQ5T319 152 aa7.08□□□□□ -1.28
SF3B3-210ENST00000567654 TSHZ3Q63HK5 1081 aa7.08□□□□□ -1.28
SF3B3-210ENST00000567654 TRIM22Q8IYM9 498 aa7.08□□□□□ -1.28
SF3B3-210ENST00000567654 PGBD3Q8N328 593 aa7.08□□□□□ -1.28
SF3B3-210ENST00000567654 PLBD2Q8NHP8 589 aa7.08□□□□□ -1.28
SF3B3-210ENST00000567654 C9orf78Q9NZ63 289 aaPredicted RBP7.08□□□□□ -1.28
SF3B3-210ENST00000567654 LRFN2Q9ULH4 789 aa7.08□□□□□ -1.28
SF3B3-210ENST00000567654 TNS1Q9HBL0 1735 aaKnown RBP7.07□□□□□ -1.28
SF3B3-210ENST00000567654 LAMA4Q16363 1823 aa7.07□□□□□ -1.28
SF3B3-210ENST00000567654 DGKZQ13574 1117 aa7.07□□□□□ -1.28
SF3B3-210ENST00000567654 HLFQ16534 295 aa7.07□□□□□ -1.28
SF3B3-210ENST00000567654 BMP2KLQ5H9B9 411 aa7.07□□□□□ -1.28
SF3B3-210ENST00000567654 COX20Q5RI15 118 aa7.07□□□□□ -1.28
SF3B3-210ENST00000567654 TTC22Q5TAA0 569 aa7.07□□□□□ -1.28
SF3B3-210ENST00000567654 KLHDC4Q8TBB5 520 aa7.07□□□□□ -1.28
SF3B3-210ENST00000567654 CRISPLD1Q9H336 500 aa7.07□□□□□ -1.28
SF3B3-210ENST00000567654 IL1RAPL2Q9NP60 686 aa7.07□□□□□ -1.28
SF3B3-210ENST00000567654 MYH13Q9UKX3 1938 aa7.07□□□□□ -1.28
SF3B3-210ENST00000567654 COL15A1P39059 1388 aa7.07□□□□□ -1.28
SF3B3-210ENST00000567654 PALLDQ8WX93 1383 aa7.07□□□□□ -1.28
SF3B3-210ENST00000567654 LRP5O75197 1615 aa7.06□□□□□ -1.28
SF3B3-210ENST00000567654 DCDC2BA2VCK2 349 aa7.06□□□□□ -1.28
SF3B3-210ENST00000567654 SURF6O75683 361 aaKnown RBP7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms