RNA–Protein interactions for RNA: ENST00000567250.5

SF3B3-208, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-208ENST00000567250 TBC1D12O60347 775 aa14.57□□□□□ -0.08
SF3B3-208ENST00000567250 POLR3DP05423 398 aaPredicted RBP14.57□□□□□ -0.08
SF3B3-208ENST00000567250 TDO2P48775 406 aa14.57□□□□□ -0.08
SF3B3-208ENST00000567250 DEFB115Q30KQ5 88 aa14.57□□□□□ -0.08
SF3B3-208ENST00000567250 SH3BP5LQ7L8J4 393 aa14.57□□□□□ -0.08
SF3B3-208ENST00000567250 KLRG1Q96E93 195 aa14.57□□□□□ -0.08
SF3B3-208ENST00000567250 FAM227BQ96M60 508 aa14.57□□□□□ -0.08
SF3B3-208ENST00000567250 WRNIP1Q96S55 665 aa14.57□□□□□ -0.08
SF3B3-208ENST00000567250 MKRN1Q9UHC7 482 aaKnown RBP14.57□□□□□ -0.08
SF3B3-208ENST00000567250 SAP30BPQ9UHR5 308 aaKnown RBP14.57□□□□□ -0.08
SF3B3-208ENST00000567250 PALD1Q9ULE6 856 aa14.57□□□□□ -0.08
SF3B3-208ENST00000567250 USP2O75604 605 aaPredicted RBP14.56□□□□□ -0.08
SF3B3-208ENST00000567250 APPP05067 770 aa14.56□□□□□ -0.08
SF3B3-208ENST00000567250 RGMBQ6NW40 437 aa14.56□□□□□ -0.08
SF3B3-208ENST00000567250 CASC1Q6TDU7 716 aa14.56□□□□□ -0.08
SF3B3-208ENST00000567250 CWC27Q6UX04 472 aaKnown RBP14.56□□□□□ -0.08
SF3B3-208ENST00000567250 MIGA2Q7L4E1 593 aa14.56□□□□□ -0.08
SF3B3-208ENST00000567250 FOXP4Q8IVH2 680 aaPredicted RBP14.56□□□□□ -0.08
SF3B3-208ENST00000567250 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.56□□□□□ -0.08
SF3B3-208ENST00000567250 CCDC102AQ96A19 550 aa14.56□□□□□ -0.08
SF3B3-208ENST00000567250 SEC62Q99442 399 aaKnown RBP14.56□□□□□ -0.08
SF3B3-208ENST00000567250 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.56□□□□□ -0.08
SF3B3-208ENST00000567250 SERPINB13Q9UIV8 391 aa14.56□□□□□ -0.08
SF3B3-208ENST00000567250 PATL2C9JE40 543 aaKnown RBP14.55□□□□□ -0.08
SF3B3-208ENST00000567250 PRKAB2O43741 272 aa14.55□□□□□ -0.08
SF3B3-208ENST00000567250 MAP3K9P80192 1104 aa14.55□□□□□ -0.08
SF3B3-208ENST00000567250 LDLRAD1Q5T700 205 aa14.55□□□□□ -0.08
SF3B3-208ENST00000567250 NAPBQ9H115 298 aa14.55□□□□□ -0.08
SF3B3-208ENST00000567250 ZMYM6O95789 1325 aa14.55□□□□□ -0.08
SF3B3-208ENST00000567250 GSG1L2A8MUP6 293 aa14.54□□□□□ -0.08
SF3B3-208ENST00000567250 UBE2Q2LH0YL09 131 aa14.54□□□□□ -0.08
SF3B3-208ENST00000567250 ZNF157P51786 506 aaPredicted RBP14.54□□□□□ -0.08
SF3B3-208ENST00000567250 HTRA3P83110 453 aa14.54□□□□□ -0.08
SF3B3-208ENST00000567250 MAP3K10Q02779 954 aa14.54□□□□□ -0.08
SF3B3-208ENST00000567250 SLC4A8Q2Y0W8 1093 aa14.54□□□□□ -0.08
SF3B3-208ENST00000567250 CCDC129Q6ZRS4 1044 aa14.54□□□□□ -0.08
SF3B3-208ENST00000567250 MOB2Q70IA6 237 aa14.54□□□□□ -0.08
SF3B3-208ENST00000567250 SKAP1Q86WV1 359 aa14.54□□□□□ -0.08
SF3B3-208ENST00000567250 SWAP70Q9UH65 585 aa14.54□□□□□ -0.08
SF3B3-208ENST00000567250 FZD1Q9UP38 647 aa14.54□□□□□ -0.08
SF3B3-208ENST00000567250 ROBO3Q96MS0 1386 aa14.54□□□□□ -0.08
SF3B3-208ENST00000567250 CEP350Q5VT06 3117 aa14.53□□□□□ -0.08
SF3B3-208ENST00000567250 SLC10A3P09131 477 aa14.53□□□□□ -0.08
SF3B3-208ENST00000567250 CHMLP26374 656 aa14.53□□□□□ -0.08
SF3B3-208ENST00000567250 NOGQ13253 232 aa14.53□□□□□ -0.08
SF3B3-208ENST00000567250 VGLL4Q14135 290 aa14.53□□□□□ -0.08
SF3B3-208ENST00000567250 SBK1Q52WX2 424 aa14.53□□□□□ -0.08
SF3B3-208ENST00000567250 NOL9Q5SY16 702 aaKnown RBP14.53□□□□□ -0.08
SF3B3-208ENST00000567250 ZNF589Q86UQ0 364 aaPredicted RBP14.53□□□□□ -0.08
SF3B3-208ENST00000567250 METTL16Q86W50 562 aaKnown RBP14.53□□□□□ -0.08
SF3B3-208ENST00000567250 IFNL3Q8IZI9 196 aa14.53□□□□□ -0.08
SF3B3-208ENST00000567250 CAPNS2Q96L46 248 aa14.53□□□□□ -0.08
SF3B3-208ENST00000567250 ZNF287Q9HBT7 754 aa14.53□□□□□ -0.08
SF3B3-208ENST00000567250 EPB41L4AQ9HCS5 686 aaPredicted RBP14.53□□□□□ -0.08
SF3B3-208ENST00000567250 ZNF112Q9UJU3 913 aa14.53□□□□□ -0.08
SF3B3-208ENST00000567250 PHIPQ8WWQ0 1821 aa14.52□□□□□ -0.08
SF3B3-208ENST00000567250 USP17L12C9JPN9 530 aa14.52□□□□□ -0.09
SF3B3-208ENST00000567250 USP17L21D6R901 530 aa14.52□□□□□ -0.09
SF3B3-208ENST00000567250 CTNND1O60716 968 aaKnown RBP14.52□□□□□ -0.09
SF3B3-208ENST00000567250 CDC45O75419 566 aa14.52□□□□□ -0.09
SF3B3-208ENST00000567250 SLC3A2P08195 630 aaKnown RBP14.52□□□□□ -0.09
SF3B3-208ENST00000567250 ZBTB48P10074 688 aaPredicted RBP14.52□□□□□ -0.09
SF3B3-208ENST00000567250 GRM1Q13255 1194 aa14.52□□□□□ -0.09
SF3B3-208ENST00000567250 C12orf60Q5U649 245 aa14.52□□□□□ -0.09
SF3B3-208ENST00000567250 CYP4F22Q6NT55 531 aa14.52□□□□□ -0.09
SF3B3-208ENST00000567250 CTR9Q6PD62 1173 aa14.52□□□□□ -0.09
SF3B3-208ENST00000567250 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.52□□□□□ -0.09
SF3B3-208ENST00000567250 RASAL3Q86YV0 1011 aa14.52□□□□□ -0.09
SF3B3-208ENST00000567250 SCYL3Q8IZE3 742 aa14.52□□□□□ -0.09
SF3B3-208ENST00000567250 SLC10A4Q96EP9 437 aa14.52□□□□□ -0.09
SF3B3-208ENST00000567250 PICK1Q9NRD5 415 aa14.52□□□□□ -0.09
SF3B3-208ENST00000567250 GINM1Q9NU53 330 aa14.52□□□□□ -0.09
SF3B3-208ENST00000567250 PTPRFP10586 1907 aa14.51□□□□□ -0.09
SF3B3-208ENST00000567250 WDR33Q9C0J8 1336 aaKnown RBP14.51□□□□□ -0.09
SF3B3-208ENST00000567250 SPDYE5A6NIY4 337 aa14.51□□□□□ -0.09
SF3B3-208ENST00000567250 FAM196BA6NMK8 535 aa14.51□□□□□ -0.09
SF3B3-208ENST00000567250 HSPD1P10809 573 aaKnown RBP14.51□□□□□ -0.09
SF3B3-208ENST00000567250 INPP5BP32019 993 aa14.51□□□□□ -0.09
SF3B3-208ENST00000567250 PLCD1P51178 756 aa14.51□□□□□ -0.09
SF3B3-208ENST00000567250 ERO1BQ86YB8 467 aa14.51□□□□□ -0.09
SF3B3-208ENST00000567250 DSCC1Q9BVC3 393 aa14.51□□□□□ -0.09
SF3B3-208ENST00000567250 TBC1D2Q9BYX2 928 aa14.51□□□□□ -0.09
SF3B3-208ENST00000567250 ELP3Q9H9T3 547 aa14.51□□□□□ -0.09
SF3B3-208ENST00000567250 SNCAIPQ9Y6H5 919 aa14.51□□□□□ -0.09
SF3B3-208ENST00000567250 PHF20L1A8MW92 1017 aa14.5□□□□□ -0.09
SF3B3-208ENST00000567250 MINDY4BA8MYZ0 360 aa14.5□□□□□ -0.09
SF3B3-208ENST00000567250 ASNSP08243 561 aa14.5□□□□□ -0.09
SF3B3-208ENST00000567250 CAP2P40123 477 aa14.5□□□□□ -0.09
SF3B3-208ENST00000567250 GABPAQ06546 454 aa14.5□□□□□ -0.09
SF3B3-208ENST00000567250 ALX1Q15699 326 aa14.5□□□□□ -0.09
SF3B3-208ENST00000567250 VPS53Q5VIR6 699 aa14.5□□□□□ -0.09
SF3B3-208ENST00000567250 C16orf86Q6ZW13 317 aa14.5□□□□□ -0.09
SF3B3-208ENST00000567250 REM2Q8IYK8 340 aaPredicted RBP14.5□□□□□ -0.09
SF3B3-208ENST00000567250 ZKSCAN4Q969J2 545 aaPredicted RBP14.5□□□□□ -0.09
SF3B3-208ENST00000567250 WNK4Q96J92 1243 aa14.5□□□□□ -0.09
SF3B3-208ENST00000567250 CLMNQ96JQ2 1002 aa14.5□□□□□ -0.09
SF3B3-208ENST00000567250 DNAJC18Q9H819 358 aa14.5□□□□□ -0.09
SF3B3-208ENST00000567250 GREB1LQ9C091 1923 aaPredicted RBP14.5□□□□□ -0.09
SF3B3-208ENST00000567250 SGSM2O43147 1006 aa14.49□□□□□ -0.09
SF3B3-208ENST00000567250 CYP2D6P10635 497 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 132.4 ms