RNA–Protein interactions for RNA: ENST00000567109.5

CDH13-209, Transcript of cadherin 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDH13, Length 8,042 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-209ENST00000567109 HOOK2Q96ED9 719 aa6.98□□□□□ -1.29
CDH13-209ENST00000567109 TRIM7Q9C029 511 aa6.98□□□□□ -1.29
CDH13-209ENST00000567109 ECHDC1Q9NTX5 307 aa6.98□□□□□ -1.29
CDH13-209ENST00000567109 EXOC6BQ9Y2D4 811 aa6.98□□□□□ -1.29
CDH13-209ENST00000567109 CDC42BPBQ9Y5S2 1711 aa6.98□□□□□ -1.29
CDH13-209ENST00000567109 PLCG2P16885 1265 aa6.98□□□□□ -1.29
CDH13-209ENST00000567109 CYP7A1P22680 504 aa6.98□□□□□ -1.29
CDH13-209ENST00000567109 UBE3BQ7Z3V4 1068 aa6.98□□□□□ -1.29
CDH13-209ENST00000567109 VPS52Q8N1B4 723 aa6.98□□□□□ -1.29
CDH13-209ENST00000567109 CNKSR1Q969H4 720 aa6.98□□□□□ -1.29
CDH13-209ENST00000567109 RRP36Q96EU6 259 aaKnown RBP6.98□□□□□ -1.29
CDH13-209ENST00000567109 KRT23Q9C075 422 aa6.98□□□□□ -1.29
CDH13-209ENST00000567109 CCDC8Q9H0W5 538 aaPredicted RBP6.98□□□□□ -1.29
CDH13-209ENST00000567109 ANKFY1Q9P2R3 1169 aa6.98□□□□□ -1.29
CDH13-209ENST00000567109 DPY19L2Q6NUT2 758 aa6.98□□□□□ -1.29
CDH13-209ENST00000567109 NCAPGQ9BPX3 1015 aa6.98□□□□□ -1.29
CDH13-209ENST00000567109 ARHGEF10LQ9HCE6 1279 aa6.98□□□□□ -1.29
CDH13-209ENST00000567109 FRMD4BQ9Y2L6 1034 aa6.98□□□□□ -1.29
CDH13-209ENST00000567109 AFG3L2Q9Y4W6 797 aa6.98□□□□□ -1.29
CDH13-209ENST00000567109 EYA2O00167 538 aa6.98□□□□□ -1.29
CDH13-209ENST00000567109 GRM8O00222 908 aa6.98□□□□□ -1.29
CDH13-209ENST00000567109 HARSP12081 509 aaKnown RBP6.98□□□□□ -1.29
CDH13-209ENST00000567109 FNBP4Q8N3X1 1017 aaPredicted RBP6.98□□□□□ -1.29
CDH13-209ENST00000567109 SMC6Q96SB8 1091 aa6.98□□□□□ -1.29
CDH13-209ENST00000567109 RASSF4Q9H2L5 321 aa6.98□□□□□ -1.29
CDH13-209ENST00000567109 RBM27Q9P2N5 1060 aaKnown RBP6.98□□□□□ -1.29
CDH13-209ENST00000567109 STX10O60499 249 aa6.98□□□□□ -1.29
CDH13-209ENST00000567109 ABL1P00519 1130 aa6.98□□□□□ -1.29
CDH13-209ENST00000567109 NAA16Q6N069 864 aaPredicted RBP6.98□□□□□ -1.29
CDH13-209ENST00000567109 HMG20BQ9P0W2 317 aa6.98□□□□□ -1.29
CDH13-209ENST00000567109 IGSF3O75054 1194 aa6.97□□□□□ -1.29
CDH13-209ENST00000567109 ATXN8OSP0DMR3 200 aa6.97□□□□□ -1.29
CDH13-209ENST00000567109 CRKLP46109 303 aaKnown RBP6.97□□□□□ -1.29
CDH13-209ENST00000567109 ISM2Q6H9L7 571 aa6.97□□□□□ -1.29
CDH13-209ENST00000567109 CROCCP2Q86T23 111 aa6.97□□□□□ -1.29
CDH13-209ENST00000567109 POTEDQ86YR6 584 aa6.97□□□□□ -1.29
CDH13-209ENST00000567109 SH2D4AQ9H788 454 aa6.97□□□□□ -1.29
CDH13-209ENST00000567109 SPDYE16A6NNV3 312 aaPredicted RBP6.97□□□□□ -1.29
CDH13-209ENST00000567109 KRT9P35527 623 aa6.97□□□□□ -1.29
CDH13-209ENST00000567109 NOLC1Q14978 699 aaKnown RBP eCLIP6.97□□□□□ -1.29
CDH13-209ENST00000567109 SPDYE2Q495Y8 402 aa6.97□□□□□ -1.29
CDH13-209ENST00000567109 FAM47CQ5HY64 1035 aa6.97□□□□□ -1.29
CDH13-209ENST00000567109 FNBP1Q96RU3 617 aa6.97□□□□□ -1.29
CDH13-209ENST00000567109 ATP5J2-PTCD1G3V325 749 aa6.97□□□□□ -1.29
CDH13-209ENST00000567109 IARSP41252 1262 aaKnown RBP6.97□□□□□ -1.29
CDH13-209ENST00000567109 ERO1AQ96HE7 468 aa6.97□□□□□ -1.29
CDH13-209ENST00000567109 NSRP1Q9H0G5 558 aaKnown RBP6.97□□□□□ -1.29
CDH13-209ENST00000567109 TTLL3Q9Y4R7 772 aa6.97□□□□□ -1.29
CDH13-209ENST00000567109 MAP3K15Q6ZN16 1313 aa6.97□□□□□ -1.29
CDH13-209ENST00000567109 A0A1B0GUA9 196 aa6.97□□□□□ -1.29
CDH13-209ENST00000567109 URI1O94763 535 aaPredicted RBP6.97□□□□□ -1.29
CDH13-209ENST00000567109 CALML3P27482 149 aa6.97□□□□□ -1.29
CDH13-209ENST00000567109 CCT6AP40227 531 aaKnown RBP6.97□□□□□ -1.29
CDH13-209ENST00000567109 GCKRQ14397 625 aa6.97□□□□□ -1.29
CDH13-209ENST00000567109 WDR44Q5JSH3 913 aa6.97□□□□□ -1.29
CDH13-209ENST00000567109 MSL1Q68DK7 614 aa6.97□□□□□ -1.29
CDH13-209ENST00000567109 TRMT2AQ8IZ69 625 aaKnown RBP6.97□□□□□ -1.29
CDH13-209ENST00000567109 CSPG5O95196 566 aa6.97□□□□□ -1.29
CDH13-209ENST00000567109 ANXA1P04083 346 aa6.97□□□□□ -1.29
CDH13-209ENST00000567109 OATP04181 439 aa6.97□□□□□ -1.29
CDH13-209ENST00000567109 GNAQP50148 359 aa6.97□□□□□ -1.29
CDH13-209ENST00000567109 RAB11FIP4Q86YS3 637 aa6.97□□□□□ -1.29
CDH13-209ENST00000567109 RHPN1Q8TCX5 695 aa6.97□□□□□ -1.29
CDH13-209ENST00000567109 CD163L1Q9NR16 1453 aa6.97□□□□□ -1.29
CDH13-209ENST00000567109 TACC3Q9Y6A5 838 aa6.97□□□□□ -1.29
CDH13-209ENST00000567109 SSFA2P28290 1259 aa6.97□□□□□ -1.29
CDH13-209ENST00000567109 SARNPP82979 210 aaKnown RBP6.97□□□□□ -1.29
CDH13-209ENST00000567109 RBM10P98175 930 aaKnown RBP6.97□□□□□ -1.29
CDH13-209ENST00000567109 STRN3Q13033 797 aa6.97□□□□□ -1.29
CDH13-209ENST00000567109 STX1AQ16623 288 aa6.97□□□□□ -1.29
CDH13-209ENST00000567109 USPL1Q5W0Q7 1092 aa6.97□□□□□ -1.29
CDH13-209ENST00000567109 B4GALNT4Q76KP1 1039 aa6.97□□□□□ -1.29
CDH13-209ENST00000567109 RPUSD2Q8IZ73 545 aaKnown RBP6.97□□□□□ -1.29
CDH13-209ENST00000567109 AFAP1L2Q8N4X5 818 aa6.97□□□□□ -1.29
CDH13-209ENST00000567109 MARCH10Q8NA82 808 aaPredicted RBP6.97□□□□□ -1.29
CDH13-209ENST00000567109 IFT74Q96LB3 600 aa6.97□□□□□ -1.29
CDH13-209ENST00000567109 MAGEB6P1A0A0J9YX57 407 aa6.97□□□□□ -1.29
CDH13-209ENST00000567109 SETSIPP0DME0 302 aa6.97□□□□□ -1.29
CDH13-209ENST00000567109 HAND2P61296 217 aa6.97□□□□□ -1.29
CDH13-209ENST00000567109 ERCC6LQ2NKX8 1250 aa6.97□□□□□ -1.29
CDH13-209ENST00000567109 PRPF40BQ6NWY9 871 aaKnown RBP6.97□□□□□ -1.29
CDH13-209ENST00000567109 FMNL3Q8IVF7 1028 aa6.97□□□□□ -1.29
CDH13-209ENST00000567109 KIFAP3Q92845 792 aa6.97□□□□□ -1.29
CDH13-209ENST00000567109 C4orf50Q6ZRC1 276 aa6.96□□□□□ -1.29
CDH13-209ENST00000567109 ANKS4BQ8N8V4 417 aa6.96□□□□□ -1.29
CDH13-209ENST00000567109 RPGRIP1Q96KN7 1286 aa6.96□□□□□ -1.29
CDH13-209ENST00000567109 SPAG5Q96R06 1193 aa6.96□□□□□ -1.29
CDH13-209ENST00000567109 STMN4Q9H169 189 aaPredicted RBP6.96□□□□□ -1.29
CDH13-209ENST00000567109 ZBTB1Q9Y2K1 713 aa6.96□□□□□ -1.29
CDH13-209ENST00000567109 TRPC3Q13507 836 aa6.96□□□□□ -1.29
CDH13-209ENST00000567109 NCOA7Q8NI08 942 aa6.96□□□□□ -1.29
CDH13-209ENST00000567109 MAST3O60307 1309 aa6.96□□□□□ -1.3
CDH13-209ENST00000567109 H0YIN7 160 aa6.96□□□□□ -1.3
CDH13-209ENST00000567109 SMTNP53814 917 aa6.96□□□□□ -1.3
CDH13-209ENST00000567109 SEPT6Q14141 434 aa6.96□□□□□ -1.3
CDH13-209ENST00000567109 SRGAP1Q7Z6B7 1085 aa6.96□□□□□ -1.3
CDH13-209ENST00000567109 FAM193BQ96PV7 902 aaPredicted RBP6.96□□□□□ -1.3
CDH13-209ENST00000567109 SLC4A4Q9Y6R1 1079 aa6.96□□□□□ -1.3
CDH13-209ENST00000567109 RAD50Q92878 1312 aa6.96□□□□□ -1.3
CDH13-209ENST00000567109 BMP15O95972 392 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms