RNA–Protein interactions for RNA: ENST00000566347.5

CLN6-207, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best) BASIC

Gene CLN6, Length 981 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-207ENST00000566347 HMMRO75330 724 aa24.63■■□□□ 1.53
CLN6-207ENST00000566347 GADL1Q6ZQY3 521 aa24.63■■□□□ 1.53
CLN6-207ENST00000566347 AACSQ86V21 672 aa24.63■■□□□ 1.53
CLN6-207ENST00000566347 TBC1D2Q9BYX2 928 aa24.63■■□□□ 1.53
CLN6-207ENST00000566347 RCAN3Q9UKA8 241 aa24.63■■□□□ 1.53
CLN6-207ENST00000566347 KIAA0100Q14667 2235 aaKnown RBP24.62■■□□□ 1.53
CLN6-207ENST00000566347 TRIM75PA6NK02 468 aa24.62■■□□□ 1.53
CLN6-207ENST00000566347 TMED8Q6PL24 325 aaPredicted RBP24.62■■□□□ 1.53
CLN6-207ENST00000566347 ADGRA1Q86SQ6 560 aa24.62■■□□□ 1.53
CLN6-207ENST00000566347 CERS3Q8IU89 383 aa24.62■■□□□ 1.53
CLN6-207ENST00000566347 ZNF333Q96JL9 665 aa24.62■■□□□ 1.53
CLN6-207ENST00000566347 COG6Q9Y2V7 657 aa24.62■■□□□ 1.53
CLN6-207ENST00000566347 FOCADQ5VW36 1801 aa24.62■■□□□ 1.53
CLN6-207ENST00000566347 ZSWIM8A7E2V4 1837 aa24.61■■□□□ 1.53
CLN6-207ENST00000566347 IDH1O75874 414 aaKnown RBP24.61■■□□□ 1.53
CLN6-207ENST00000566347 RHPN1Q8TCX5 695 aa24.61■■□□□ 1.53
CLN6-207ENST00000566347 TGFBRAP1Q8WUH2 860 aa24.61■■□□□ 1.53
CLN6-207ENST00000566347 ZBTB40Q9NUA8 1239 aa24.61■■□□□ 1.53
CLN6-207ENST00000566347 CDK5RAP2Q96SN8 1893 aa24.61■■□□□ 1.53
CLN6-207ENST00000566347 FLT1P17948 1338 aa24.61■■□□□ 1.53
CLN6-207ENST00000566347 CYP2C8P10632 490 aa24.6■■□□□ 1.53
CLN6-207ENST00000566347 CYP7A1P22680 504 aa24.6■■□□□ 1.53
CLN6-207ENST00000566347 HOXD10P28358 340 aa24.6■■□□□ 1.53
CLN6-207ENST00000566347 CAP2P40123 477 aa24.6■■□□□ 1.53
CLN6-207ENST00000566347 PSMC4P43686 418 aa24.6■■□□□ 1.53
CLN6-207ENST00000566347 MAPKAPK5Q8IW41 473 aa24.6■■□□□ 1.53
CLN6-207ENST00000566347 ATAD5Q96QE3 1844 aa24.6■■□□□ 1.53
CLN6-207ENST00000566347 POTEFA5A3E0 1075 aa24.59■■□□□ 1.53
CLN6-207ENST00000566347 BCRP11274 1271 aa24.59■■□□□ 1.53
CLN6-207ENST00000566347 KIF1BPQ96EK5 621 aa24.59■■□□□ 1.53
CLN6-207ENST00000566347 TRIM47Q96LD4 638 aa24.59■■□□□ 1.53
CLN6-207ENST00000566347 TMEM106CQ9BVX2 250 aa24.59■■□□□ 1.53
CLN6-207ENST00000566347 IL1RAPL2Q9NP60 686 aa24.59■■□□□ 1.53
CLN6-207ENST00000566347 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.59■■□□□ 1.53
CLN6-207ENST00000566347 FMNL1O95466 1100 aaPredicted RBP24.58■■□□□ 1.53
CLN6-207ENST00000566347 MAP3K12Q12852 859 aa24.58■■□□□ 1.53
CLN6-207ENST00000566347 CCDC84Q86UT8 332 aaPredicted RBP24.58■■□□□ 1.53
CLN6-207ENST00000566347 FOXP4Q8IVH2 680 aaPredicted RBP24.58■■□□□ 1.53
CLN6-207ENST00000566347 CLASRPQ8N2M8 674 aaKnown RBP24.58■■□□□ 1.53
CLN6-207ENST00000566347 ZNF280CQ8ND82 737 aa24.58■■□□□ 1.53
CLN6-207ENST00000566347 TRIM34Q9BYJ4 488 aa24.58■■□□□ 1.53
CLN6-207ENST00000566347 SRRDQ9UH36 339 aa24.58■■□□□ 1.53
CLN6-207ENST00000566347 AGTPBP1Q9UPW5 1226 aa24.58■■□□□ 1.53
CLN6-207ENST00000566347 SIPA1L1O43166 1804 aa24.57■■□□□ 1.52
CLN6-207ENST00000566347 USP17L5A8MUK1 530 aa24.57■■□□□ 1.52
CLN6-207ENST00000566347 MAGEB6Q8N7X4 407 aa24.57■■□□□ 1.52
CLN6-207ENST00000566347 PROCA1Q8NCQ7 364 aaPredicted RBP24.57■■□□□ 1.52
CLN6-207ENST00000566347 AS3MTQ9HBK9 375 aa24.57■■□□□ 1.52
CLN6-207ENST00000566347 PNMA3Q9UL41 463 aa24.57■■□□□ 1.52
CLN6-207ENST00000566347 HLA-DOAP06340 250 aa24.56■■□□□ 1.52
CLN6-207ENST00000566347 CTGFP29279 349 aa24.56■■□□□ 1.52
CLN6-207ENST00000566347 FCGRTP55899 365 aa24.56■■□□□ 1.52
CLN6-207ENST00000566347 DYNLL1P63167 89 aaKnown RBP24.56■■□□□ 1.52
CLN6-207ENST00000566347 SPP2Q13103 211 aa24.56■■□□□ 1.52
CLN6-207ENST00000566347 TTF1Q15361 905 aaPredicted RBP24.56■■□□□ 1.52
CLN6-207ENST00000566347 METTL16Q86W50 562 aaKnown RBP24.56■■□□□ 1.52
CLN6-207ENST00000566347 CRACR2BQ8N4Y2 399 aaPredicted RBP24.56■■□□□ 1.52
CLN6-207ENST00000566347 SMCR8Q8TEV9 937 aaPredicted RBP24.56■■□□□ 1.52
CLN6-207ENST00000566347 NDUFB9Q9Y6M9 179 aa24.56■■□□□ 1.52
CLN6-207ENST00000566347 RAB11FIP3O75154 756 aa24.55■■□□□ 1.52
CLN6-207ENST00000566347 ECM2O94769 699 aaPredicted RBP24.55■■□□□ 1.52
CLN6-207ENST00000566347 ASNSP08243 561 aa24.55■■□□□ 1.52
CLN6-207ENST00000566347 OSBPP22059 807 aa24.55■■□□□ 1.52
CLN6-207ENST00000566347 RRP1BQ14684 758 aaKnown RBP24.55■■□□□ 1.52
CLN6-207ENST00000566347 PRPF38BQ5VTL8 546 aaKnown RBP24.55■■□□□ 1.52
CLN6-207ENST00000566347 SIRT2Q8IXJ6 389 aa24.55■■□□□ 1.52
CLN6-207ENST00000566347 ANTXR1Q9H6X2 564 aa24.55■■□□□ 1.52
CLN6-207ENST00000566347 GINM1Q9NU53 330 aa24.55■■□□□ 1.52
CLN6-207ENST00000566347 PALD1Q9ULE6 856 aa24.55■■□□□ 1.52
CLN6-207ENST00000566347 APBB1O00213 710 aa24.54■■□□□ 1.52
CLN6-207ENST00000566347 IFIT2P09913 472 aaKnown RBP24.54■■□□□ 1.52
CLN6-207ENST00000566347 PABPC4Q13310 644 aaKnown RBP eCLIP24.54■■□□□ 1.522e-12■□□□□ 10.6
CLN6-207ENST00000566347 MIGA1Q8NAN2 632 aa24.54■■□□□ 1.52
CLN6-207ENST00000566347 RAET1EQ8TD07 263 aa24.54■■□□□ 1.52
CLN6-207ENST00000566347 SH3TC2Q8TF17 1288 aa24.54■■□□□ 1.52
CLN6-207ENST00000566347 MYPNQ86TC9 1320 aa24.54■■□□□ 1.52
CLN6-207ENST00000566347 LOC285556D6RIA3 1793 aa24.54■■□□□ 1.52
CLN6-207ENST00000566347 MGAMO43451 1857 aa24.53■■□□□ 1.52
CLN6-207ENST00000566347 USP5P45974 858 aa24.53■■□□□ 1.52
CLN6-207ENST00000566347 PDE3AQ14432 1141 aa24.53■■□□□ 1.52
CLN6-207ENST00000566347 SLC4A8Q2Y0W8 1093 aa24.53■■□□□ 1.52
CLN6-207ENST00000566347 TREML2Q5T2D2 321 aa24.53■■□□□ 1.52
CLN6-207ENST00000566347 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.53■■□□□ 1.52
CLN6-207ENST00000566347 WDR18Q9BV38 432 aa24.53■■□□□ 1.52
CLN6-207ENST00000566347 SAP30BPQ9UHR5 308 aaKnown RBP24.53■■□□□ 1.52
CLN6-207ENST00000566347 EN2P19622 333 aaPredicted RBP24.52■■□□□ 1.52
CLN6-207ENST00000566347 HMGCS2P54868 508 aa24.52■■□□□ 1.52
CLN6-207ENST00000566347 DNAJC18Q9H819 358 aa24.52■■□□□ 1.52
CLN6-207ENST00000566347 MYH1P12882 1939 aa24.52■■□□□ 1.52
CLN6-207ENST00000566347 BRCA2P51587 3418 aa24.51■■□□□ 1.51
CLN6-207ENST00000566347 SH3D19Q5HYK7 790 aa24.51■■□□□ 1.51
CLN6-207ENST00000566347 GRK4P32298 578 aa24.5■■□□□ 1.51
CLN6-207ENST00000566347 MKI67P46013 3256 aaKnown RBP24.49■■□□□ 1.51
CLN6-207ENST00000566347 GCLCP48506 637 aaPredicted RBP24.49■■□□□ 1.51
CLN6-207ENST00000566347 BACE1P56817 501 aa24.49■■□□□ 1.51
CLN6-207ENST00000566347 PRKCZQ05513 592 aa24.49■■□□□ 1.51
CLN6-207ENST00000566347 MYCP01106 439 aaPredicted RBP24.48■■□□□ 1.51
CLN6-207ENST00000566347 MTMR2Q13614 643 aa24.48■■□□□ 1.51
CLN6-207ENST00000566347 FAM110CQ1W6H9 321 aa24.48■■□□□ 1.51
CLN6-207ENST00000566347 SLC9C2Q5TAH2 1124 aa24.48■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms