RNA–Protein interactions for RNA: ENST00000566247.1

TRADD-205, Transcript of TNFRSF1A associated via death domain, humanhuman

TSL 2

Gene TRADD, Length 450 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-205ENST00000566247 PCNTO95613 3336 aa21.83■■□□□ 1.09
TRADD-205ENST00000566247 PHF20L1A8MW92 1017 aa21.83■■□□□ 1.09
TRADD-205ENST00000566247 PDE1AP54750 535 aa21.83■■□□□ 1.09
TRADD-205ENST00000566247 SCYL3Q8IZE3 742 aa21.83■■□□□ 1.09
TRADD-205ENST00000566247 FSD1Q9BTV5 496 aa21.83■■□□□ 1.09
TRADD-205ENST00000566247 STAP2Q9UGK3 403 aa21.83■■□□□ 1.09
TRADD-205ENST00000566247 CHGBP05060 677 aa21.82■■□□□ 1.08
TRADD-205ENST00000566247 ZFYP08048 801 aaPredicted RBP21.82■■□□□ 1.08
TRADD-205ENST00000566247 GTF2A2P52657 109 aa21.82■■□□□ 1.08
TRADD-205ENST00000566247 PPATQ06203 517 aa21.82■■□□□ 1.08
TRADD-205ENST00000566247 PPIL2Q13356 520 aa21.82■■□□□ 1.08
TRADD-205ENST00000566247 PRDM10Q9NQV6 1147 aa21.82■■□□□ 1.08
TRADD-205ENST00000566247 FOCADQ5VW36 1801 aa21.81■■□□□ 1.08
TRADD-205ENST00000566247 RNF113AO15541 343 aaKnown RBP21.81■■□□□ 1.08
TRADD-205ENST00000566247 CTNND1O60716 968 aaKnown RBP21.81■■□□□ 1.08
TRADD-205ENST00000566247 OTUD7BQ6GQQ9 843 aa21.81■■□□□ 1.08
TRADD-205ENST00000566247 TTC6Q86TZ1 520 aa21.81■■□□□ 1.08
TRADD-205ENST00000566247 FOXP4Q8IVH2 680 aaPredicted RBP21.81■■□□□ 1.08
TRADD-205ENST00000566247 CDK5RAP2Q96SN8 1893 aa21.8■■□□□ 1.08
TRADD-205ENST00000566247 CCL15-CCL14A0A0B4J2E2 113 aa21.8■■□□□ 1.08
TRADD-205ENST00000566247 IRF6O14896 467 aa21.8■■□□□ 1.08
TRADD-205ENST00000566247 ALDH1A1P00352 501 aa21.8■■□□□ 1.08
TRADD-205ENST00000566247 POLR3DP05423 398 aaPredicted RBP21.8■■□□□ 1.08
TRADD-205ENST00000566247 SNAPC2Q13487 334 aa21.8■■□□□ 1.08
TRADD-205ENST00000566247 CCL15Q16663 113 aa21.8■■□□□ 1.08
TRADD-205ENST00000566247 IFNL1Q8IU54 200 aa21.8■■□□□ 1.08
TRADD-205ENST00000566247 SDR42E1Q8WUS8 393 aa21.8■■□□□ 1.08
TRADD-205ENST00000566247 APPBP2Q92624 585 aa21.8■■□□□ 1.08
TRADD-205ENST00000566247 DDRGK1Q96HY6 314 aa21.8■■□□□ 1.08
TRADD-205ENST00000566247 PUS7LQ9H0K6 701 aaKnown RBP21.8■■□□□ 1.08
TRADD-205ENST00000566247 MCM9Q9NXL9 1143 aa21.8■■□□□ 1.08
TRADD-205ENST00000566247 MYH7P12883 1935 aa21.78■■□□□ 1.08
TRADD-205ENST00000566247 IGF2BP3O00425 579 aaKnown RBP eCLIP21.78■■□□□ 1.08
TRADD-205ENST00000566247 PRKAB2O43741 272 aa21.78■■□□□ 1.08
TRADD-205ENST00000566247 CETPP11597 493 aa21.78■■□□□ 1.08
TRADD-205ENST00000566247 PTPRAP18433 802 aa21.78■■□□□ 1.08
TRADD-205ENST00000566247 COL13A1Q5TAT6 717 aaPredicted RBP21.78■■□□□ 1.08
TRADD-205ENST00000566247 EVI5LQ96CN4 794 aa21.78■■□□□ 1.08
TRADD-205ENST00000566247 MS4A4AQ96JQ5 239 aa21.78■■□□□ 1.08
TRADD-205ENST00000566247 SLC4A4Q9Y6R1 1079 aa21.78■■□□□ 1.08
TRADD-205ENST00000566247 TESPA1A2RU30 521 aaPredicted RBP21.77■■□□□ 1.08
TRADD-205ENST00000566247 TBC1D8O95759 1140 aa21.77■■□□□ 1.08
TRADD-205ENST00000566247 AMOTL1Q8IY63 956 aa21.77■■□□□ 1.08
TRADD-205ENST00000566247 BRI3BPQ8WY22 251 aa21.77■■□□□ 1.08
TRADD-205ENST00000566247 DCP1AQ9NPI6 582 aaPredicted RBP21.77■■□□□ 1.08
TRADD-205ENST00000566247 ATP8A2Q9NTI2 1148 aa21.77■■□□□ 1.08
TRADD-205ENST00000566247 SERPINB13Q9UIV8 391 aa21.77■■□□□ 1.08
TRADD-205ENST00000566247 ZHX2Q9Y6X8 837 aa21.77■■□□□ 1.08
TRADD-205ENST00000566247 TRIM6-TRIM34B2RNG4 842 aa21.76■■□□□ 1.07
TRADD-205ENST00000566247 CAP2P40123 477 aa21.76■■□□□ 1.07
TRADD-205ENST00000566247 METTL16Q86W50 562 aaKnown RBP21.76■■□□□ 1.07
TRADD-205ENST00000566247 NAV1Q8NEY1 1877 aa21.76■■□□□ 1.07
TRADD-205ENST00000566247 OSBP2Q969R2 916 aa21.76■■□□□ 1.07
TRADD-205ENST00000566247 EHD4Q9H223 541 aa21.76■■□□□ 1.07
TRADD-205ENST00000566247 DNAJC18Q9H819 358 aa21.76■■□□□ 1.07
TRADD-205ENST00000566247 MYH1P12882 1939 aa21.75■■□□□ 1.07
TRADD-205ENST00000566247 PLEKHM2Q8IWE5 1019 aa21.75■■□□□ 1.07
TRADD-205ENST00000566247 PTPN18Q99952 460 aa21.75■■□□□ 1.07
TRADD-205ENST00000566247 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.75■■□□□ 1.07
TRADD-205ENST00000566247 KCNH4Q9UQ05 1017 aa21.75■■□□□ 1.07
TRADD-205ENST00000566247 DOCK1Q14185 1865 aa21.75■■□□□ 1.07
TRADD-205ENST00000566247 SIPA1L1O43166 1804 aa21.74■■□□□ 1.07
TRADD-205ENST00000566247 GDF11O95390 407 aa21.74■■□□□ 1.07
TRADD-205ENST00000566247 PLCD1P51178 756 aa21.74■■□□□ 1.07
TRADD-205ENST00000566247 CCDC84Q86UT8 332 aaPredicted RBP21.74■■□□□ 1.07
TRADD-205ENST00000566247 STRBPQ96SI9 672 aaKnown RBP21.74■■□□□ 1.07
TRADD-205ENST00000566247 LAMB1P07942 1786 aa21.74■■□□□ 1.07
TRADD-205ENST00000566247 M0R2C6 588 aa21.73■■□□□ 1.07
TRADD-205ENST00000566247 CXCL11O14625 94 aa21.73■■□□□ 1.07
TRADD-205ENST00000566247 GPAA1O43292 621 aa21.73■■□□□ 1.07
TRADD-205ENST00000566247 RRP1BQ14684 758 aaKnown RBP21.73■■□□□ 1.07
TRADD-205ENST00000566247 RILPL2Q969X0 211 aa21.73■■□□□ 1.07
TRADD-205ENST00000566247 DDX60LQ5H9U9 1706 aaKnown RBP21.72■■□□□ 1.07
TRADD-205ENST00000566247 TRIM75PA6NK02 468 aa21.72■■□□□ 1.07
TRADD-205ENST00000566247 USP17L5A8MUK1 530 aa21.72■■□□□ 1.07
TRADD-205ENST00000566247 ASNSP08243 561 aa21.72■■□□□ 1.07
TRADD-205ENST00000566247 CYP2D6P10635 497 aa21.72■■□□□ 1.07
TRADD-205ENST00000566247 GNAT2P19087 354 aa21.72■■□□□ 1.07
TRADD-205ENST00000566247 ZMYM1Q5SVZ6 1142 aa21.72■■□□□ 1.07
TRADD-205ENST00000566247 FAM43AQ8N2R8 423 aa21.72■■□□□ 1.07
TRADD-205ENST00000566247 CFHR5Q9BXR6 569 aa21.72■■□□□ 1.07
TRADD-205ENST00000566247 TBC1D2Q9BYX2 928 aa21.72■■□□□ 1.07
TRADD-205ENST00000566247 OSBPL3Q9H4L5 887 aa21.72■■□□□ 1.07
TRADD-205ENST00000566247 AS3MTQ9HBK9 375 aa21.72■■□□□ 1.07
TRADD-205ENST00000566247 AFG3L2Q9Y4W6 797 aa21.72■■□□□ 1.07
TRADD-205ENST00000566247 BTBD19C9JJ37 291 aa21.71■■□□□ 1.07
TRADD-205ENST00000566247 APPP05067 770 aa21.71■■□□□ 1.07
TRADD-205ENST00000566247 NEFLP07196 543 aa21.71■■□□□ 1.07
TRADD-205ENST00000566247 TAF1CQ15572 869 aaPredicted RBP21.71■■□□□ 1.07
TRADD-205ENST00000566247 GINM1Q9NU53 330 aa21.71■■□□□ 1.07
TRADD-205ENST00000566247 USP17L12C9JPN9 530 aa21.7■■□□□ 1.06
TRADD-205ENST00000566247 USP17L21D6R901 530 aa21.7■■□□□ 1.06
TRADD-205ENST00000566247 GPR25O00155 361 aa21.7■■□□□ 1.06
TRADD-205ENST00000566247 CENPBP07199 599 aaPredicted RBP21.7■■□□□ 1.06
TRADD-205ENST00000566247 CRHR2Q13324 411 aa21.7■■□□□ 1.06
TRADD-205ENST00000566247 CERKLQ49MI3 558 aaPredicted RBP21.7■■□□□ 1.06
TRADD-205ENST00000566247 TATDN1Q6P1N9 297 aa21.7■■□□□ 1.06
TRADD-205ENST00000566247 GADL1Q6ZQY3 521 aa21.7■■□□□ 1.06
TRADD-205ENST00000566247 TNS4Q8IZW8 715 aa21.7■■□□□ 1.06
TRADD-205ENST00000566247 ZNF280CQ8ND82 737 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms