RNA–Protein interactions for RNA: ENST00000566136.1

UBFD1-205, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 2,485 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-205ENST00000566136 PTCH2Q9Y6C5 1203 aa12.71□□□□□ -0.37
UBFD1-205ENST00000566136 ARHGEF10O15013 1369 aa12.71□□□□□ -0.37
UBFD1-205ENST00000566136 STAT3P40763 770 aa12.71□□□□□ -0.37
UBFD1-205ENST00000566136 MLC1Q15049 377 aa12.71□□□□□ -0.37
UBFD1-205ENST00000566136 TPH2Q8IWU9 490 aa12.71□□□□□ -0.37
UBFD1-205ENST00000566136 HOOK2Q96ED9 719 aa12.71□□□□□ -0.37
UBFD1-205ENST00000566136 SPON2Q9BUD6 331 aa12.71□□□□□ -0.37
UBFD1-205ENST00000566136 EP400Q96L91 3159 aa12.7□□□□□ -0.38
UBFD1-205ENST00000566136 TUBB8Q3ZCM7 444 aa12.7□□□□□ -0.38
UBFD1-205ENST00000566136 ZSCAN30Q86W11 494 aa12.7□□□□□ -0.38
UBFD1-205ENST00000566136 RELTQ969Z4 430 aa12.7□□□□□ -0.38
UBFD1-205ENST00000566136 NUDT16Q96DE0 195 aaKnown RBP12.7□□□□□ -0.38
UBFD1-205ENST00000566136 TRIM8Q9BZR9 551 aa12.7□□□□□ -0.38
UBFD1-205ENST00000566136 TRIM35Q9UPQ4 493 aa12.7□□□□□ -0.38
UBFD1-205ENST00000566136 CLGNO14967 610 aa12.7□□□□□ -0.38
UBFD1-205ENST00000566136 ZRANB1Q9UGI0 708 aa12.7□□□□□ -0.38
UBFD1-205ENST00000566136 TRPM3Q9HCF6 1732 aaPredicted RBP12.69□□□□□ -0.38
UBFD1-205ENST00000566136 SLC10A3P09131 477 aa12.69□□□□□ -0.38
UBFD1-205ENST00000566136 CTHP32929 405 aa12.69□□□□□ -0.38
UBFD1-205ENST00000566136 ATP1A2P50993 1020 aa12.69□□□□□ -0.38
UBFD1-205ENST00000566136 NEK2P51955 445 aa12.69□□□□□ -0.38
UBFD1-205ENST00000566136 NEXNQ0ZGT2 675 aa12.69□□□□□ -0.38
UBFD1-205ENST00000566136 FUT2Q10981 343 aa12.69□□□□□ -0.38
UBFD1-205ENST00000566136 CT47A1Q5JQC4 288 aaPredicted RBP12.69□□□□□ -0.38
UBFD1-205ENST00000566136 CPXCR1Q8N123 301 aa12.69□□□□□ -0.38
UBFD1-205ENST00000566136 RASGRP4Q8TDF6 673 aa12.69□□□□□ -0.38
UBFD1-205ENST00000566136 TMEM134Q9H6X4 195 aa12.69□□□□□ -0.38
UBFD1-205ENST00000566136 CNNM2Q9H8M5 875 aa12.69□□□□□ -0.38
UBFD1-205ENST00000566136 MRGBPQ9NV56 204 aa12.69□□□□□ -0.38
UBFD1-205ENST00000566136 FAM83GA6ND36 823 aa12.69□□□□□ -0.38
UBFD1-205ENST00000566136 SMAD7O15105 426 aaKnown RBP12.69□□□□□ -0.38
UBFD1-205ENST00000566136 PDE8AO60658 829 aa12.69□□□□□ -0.38
UBFD1-205ENST00000566136 RASGRP1O95267 797 aa12.69□□□□□ -0.38
UBFD1-205ENST00000566136 KRT26Q7Z3Y9 468 aa12.69□□□□□ -0.38
UBFD1-205ENST00000566136 DMRTB1Q96MA1 342 aa12.69□□□□□ -0.38
UBFD1-205ENST00000566136 YIPF4Q9BSR8 244 aa12.69□□□□□ -0.38
UBFD1-205ENST00000566136 SEZ6LQ9BYH1 1024 aa12.69□□□□□ -0.38
UBFD1-205ENST00000566136 IP6K2Q9UHH9 426 aa12.69□□□□□ -0.38
UBFD1-205ENST00000566136 FKBPLQ9UIM3 349 aa12.69□□□□□ -0.38
UBFD1-205ENST00000566136 ABCA3Q99758 1704 aa12.69□□□□□ -0.38
UBFD1-205ENST00000566136 hCG_1642624A0A1W2PR95 340 aa12.68□□□□□ -0.38
UBFD1-205ENST00000566136 RIPK4P57078 832 aa12.68□□□□□ -0.38
UBFD1-205ENST00000566136 EXOSC9Q06265 439 aaKnown RBP12.68□□□□□ -0.38
UBFD1-205ENST00000566136 C1QBPQ07021 282 aaKnown RBP12.68□□□□□ -0.38
UBFD1-205ENST00000566136 CCDC70Q6NSX1 233 aa12.68□□□□□ -0.38
UBFD1-205ENST00000566136 LVRNQ6Q4G3 990 aa12.68□□□□□ -0.38
UBFD1-205ENST00000566136 NME9Q86XW9 330 aa12.68□□□□□ -0.38
UBFD1-205ENST00000566136 MYCBPQ99417 103 aaPredicted RBP12.68□□□□□ -0.38
UBFD1-205ENST00000566136 KMT5AQ9NQR1 393 aa12.68□□□□□ -0.38
UBFD1-205ENST00000566136 POLKQ9UBT6 870 aa12.68□□□□□ -0.38
UBFD1-205ENST00000566136 MORC2Q9Y6X9 1032 aaPredicted RBP12.68□□□□□ -0.38
UBFD1-205ENST00000566136 ATP7BP35670 1465 aa12.68□□□□□ -0.38
UBFD1-205ENST00000566136 PPIP5K1Q6PFW1 1433 aa12.68□□□□□ -0.38
UBFD1-205ENST00000566136 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.68□□□□□ -0.38
UBFD1-205ENST00000566136 A0A087X0B3 334 aa12.68□□□□□ -0.38
UBFD1-205ENST00000566136 MINDY4BA8MYZ0 360 aa12.68□□□□□ -0.38
UBFD1-205ENST00000566136 GCGRP47871 477 aa12.68□□□□□ -0.38
UBFD1-205ENST00000566136 C8orf34Q49A92 452 aa12.68□□□□□ -0.38
UBFD1-205ENST00000566136 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.68□□□□□ -0.38
UBFD1-205ENST00000566136 KIAA1958Q8N8K9 716 aa12.68□□□□□ -0.38
UBFD1-205ENST00000566136 TSKSQ9UJT2 592 aa12.68□□□□□ -0.38
UBFD1-205ENST00000566136 PPT2Q9UMR5 302 aa12.68□□□□□ -0.38
UBFD1-205ENST00000566136 MSRB2Q9Y3D2 182 aa12.68□□□□□ -0.38
UBFD1-205ENST00000566136 PCDHGA11Q9Y5H2 935 aa12.68□□□□□ -0.38
UBFD1-205ENST00000566136 GLI3P10071 1580 aa12.68□□□□□ -0.38
UBFD1-205ENST00000566136 TNFRSF21O75509 655 aa12.67□□□□□ -0.38
UBFD1-205ENST00000566136 SPECC1Q5M775 1068 aa12.67□□□□□ -0.38
UBFD1-205ENST00000566136 CDH19Q9H159 772 aa12.67□□□□□ -0.38
UBFD1-205ENST00000566136 FNIP2Q9P278 1114 aa12.67□□□□□ -0.38
UBFD1-205ENST00000566136 POLIQ9UNA4 740 aa12.67□□□□□ -0.38
UBFD1-205ENST00000566136 HCN4Q9Y3Q4 1203 aa12.67□□□□□ -0.38
UBFD1-205ENST00000566136 ALS2Q96Q42 1657 aa12.67□□□□□ -0.38
UBFD1-205ENST00000566136 RASSF10A6NK89 507 aa12.67□□□□□ -0.38
UBFD1-205ENST00000566136 GOLIM4O00461 696 aa12.67□□□□□ -0.38
UBFD1-205ENST00000566136 FIBPO43427 364 aa12.67□□□□□ -0.38
UBFD1-205ENST00000566136 USPL1Q5W0Q7 1092 aa12.67□□□□□ -0.38
UBFD1-205ENST00000566136 MAATS1Q7Z4T9 603 aa12.67□□□□□ -0.38
UBFD1-205ENST00000566136 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.67□□□□□ -0.38
UBFD1-205ENST00000566136 SKA1Q96BD8 255 aa12.67□□□□□ -0.38
UBFD1-205ENST00000566136 INMTO95050 263 aa12.66□□□□□ -0.38
UBFD1-205ENST00000566136 HMOX1P09601 288 aa12.66□□□□□ -0.38
UBFD1-205ENST00000566136 TYW1BQ6NUM6 668 aa12.66□□□□□ -0.38
UBFD1-205ENST00000566136 PLCH1Q4KWH8 1693 aa12.66□□□□□ -0.38
UBFD1-205ENST00000566136 SNX2O60749 519 aa12.66□□□□□ -0.38
UBFD1-205ENST00000566136 PRKAR2BP31323 418 aa12.66□□□□□ -0.38
UBFD1-205ENST00000566136 PIN1Q13526 163 aaPredicted RBP12.66□□□□□ -0.38
UBFD1-205ENST00000566136 CCDC92Q53HC0 331 aaPredicted RBP12.66□□□□□ -0.38
UBFD1-205ENST00000566136 EAF1Q96JC9 268 aaPredicted RBP12.66□□□□□ -0.38
UBFD1-205ENST00000566136 CD248Q9HCU0 757 aa12.66□□□□□ -0.38
UBFD1-205ENST00000566136 MAPK8IP1Q9UQF2 711 aa12.66□□□□□ -0.38
UBFD1-205ENST00000566136 MAP2P11137 1827 aaKnown RBP12.65□□□□□ -0.38
UBFD1-205ENST00000566136 XRRA1Q6P2D8 792 aa12.65□□□□□ -0.38
UBFD1-205ENST00000566136 ERMP1Q7Z2K6 904 aa12.65□□□□□ -0.38
UBFD1-205ENST00000566136 RELL1Q8IUW5 271 aa12.65□□□□□ -0.38
UBFD1-205ENST00000566136 AASDHPPTQ9NRN7 309 aa12.65□□□□□ -0.38
UBFD1-205ENST00000566136 SMC4Q9NTJ3 1288 aa12.65□□□□□ -0.38
UBFD1-205ENST00000566136 ITKQ08881 620 aa12.65□□□□□ -0.38
UBFD1-205ENST00000566136 NUTM2GQ5VZR2 741 aa12.65□□□□□ -0.38
UBFD1-205ENST00000566136 TDO2P48775 406 aa12.64□□□□□ -0.39
UBFD1-205ENST00000566136 SARSP49591 514 aaKnown RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms