RNA–Protein interactions for RNA: ENST00000566016.5

SHCBP1-205, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 1 (best)

Gene SHCBP1, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-205ENST00000566016 MYH8P13535 1937 aa25.31■■□□□ 1.64
SHCBP1-205ENST00000566016 GPAA1O43292 621 aa25.31■■□□□ 1.64
SHCBP1-205ENST00000566016 TTC6Q86TZ1 520 aa25.31■■□□□ 1.64
SHCBP1-205ENST00000566016 RILPL2Q969X0 211 aa25.31■■□□□ 1.64
SHCBP1-205ENST00000566016 SAP30BPQ9UHR5 308 aaKnown RBP25.31■■□□□ 1.64
SHCBP1-205ENST00000566016 SPRYD7Q5W111 196 aa25.3■■□□□ 1.64
SHCBP1-205ENST00000566016 GIMAP6Q6P9H5 292 aa25.3■■□□□ 1.64
SHCBP1-205ENST00000566016 DDRGK1Q96HY6 314 aa25.3■■□□□ 1.64
SHCBP1-205ENST00000566016 XPO5Q9HAV4 1204 aaKnown RBP eCLIP25.3■■□□□ 1.64
SHCBP1-205ENST00000566016 PPP4R2Q9NY27 417 aa25.3■■□□□ 1.64
SHCBP1-205ENST00000566016 SNCAIPQ9Y6H5 919 aa25.3■■□□□ 1.64
SHCBP1-205ENST00000566016 SLC4A4Q9Y6R1 1079 aa25.3■■□□□ 1.64
SHCBP1-205ENST00000566016 M0R2C6 588 aa25.29■■□□□ 1.64
SHCBP1-205ENST00000566016 AOC2O75106 756 aa25.29■■□□□ 1.64
SHCBP1-205ENST00000566016 GSPT1P15170 499 aaKnown RBP25.29■■□□□ 1.64
SHCBP1-205ENST00000566016 INPP5BP32019 993 aa25.29■■□□□ 1.64
SHCBP1-205ENST00000566016 REM2Q8IYK8 340 aaPredicted RBP25.29■■□□□ 1.64
SHCBP1-205ENST00000566016 ZKSCAN4Q969J2 545 aaPredicted RBP25.29■■□□□ 1.64
SHCBP1-205ENST00000566016 WNK4Q96J92 1243 aa25.29■■□□□ 1.64
SHCBP1-205ENST00000566016 HELLSQ9NRZ9 838 aa25.29■■□□□ 1.64
SHCBP1-205ENST00000566016 MCM9Q9NXL9 1143 aa25.29■■□□□ 1.64
SHCBP1-205ENST00000566016 PHIPQ8WWQ0 1821 aa25.29■■□□□ 1.64
SHCBP1-205ENST00000566016 SPDYE5A6NIY4 337 aa25.28■■□□□ 1.64
SHCBP1-205ENST00000566016 PRKAB2O43741 272 aa25.28■■□□□ 1.64
SHCBP1-205ENST00000566016 CTNND1O60716 968 aaKnown RBP25.28■■□□□ 1.64
SHCBP1-205ENST00000566016 ELP3Q9H9T3 547 aa25.28■■□□□ 1.64
SHCBP1-205ENST00000566016 SERPINB13Q9UIV8 391 aa25.28■■□□□ 1.64
SHCBP1-205ENST00000566016 HIP1O00291 1037 aa25.28■■□□□ 1.64
SHCBP1-205ENST00000566016 MAP2K1Q02750 393 aaPredicted RBP25.28■■□□□ 1.64
SHCBP1-205ENST00000566016 ERO1BQ86YB8 467 aa25.28■■□□□ 1.64
SHCBP1-205ENST00000566016 DNAJC18Q9H819 358 aa25.28■■□□□ 1.64
SHCBP1-205ENST00000566016 SCYL3Q8IZE3 742 aa25.27■■□□□ 1.64
SHCBP1-205ENST00000566016 CRACR2BQ8N4Y2 399 aaPredicted RBP25.27■■□□□ 1.64
SHCBP1-205ENST00000566016 OPTNQ96CV9 577 aa25.27■■□□□ 1.64
SHCBP1-205ENST00000566016 SEC62Q99442 399 aaKnown RBP25.27■■□□□ 1.64
SHCBP1-205ENST00000566016 PTPRFP10586 1907 aa25.26■■□□□ 1.63
SHCBP1-205ENST00000566016 FAM196BA6NMK8 535 aa25.26■■□□□ 1.63
SHCBP1-205ENST00000566016 GSG1L2A8MUP6 293 aa25.26■■□□□ 1.63
SHCBP1-205ENST00000566016 POLR3DP05423 398 aaPredicted RBP25.26■■□□□ 1.63
SHCBP1-205ENST00000566016 SDSP20132 328 aa25.26■■□□□ 1.63
SHCBP1-205ENST00000566016 TRIM34Q9BYJ4 488 aa25.26■■□□□ 1.63
SHCBP1-205ENST00000566016 SLURP2P0DP57 97 aa25.25■■□□□ 1.63
SHCBP1-205ENST00000566016 PLCD1P51178 756 aa25.25■■□□□ 1.63
SHCBP1-205ENST00000566016 KIF23Q02241 960 aaPredicted RBP25.25■■□□□ 1.63
SHCBP1-205ENST00000566016 GABPAQ06546 454 aa25.25■■□□□ 1.63
SHCBP1-205ENST00000566016 AMOTL1Q8IY63 956 aa25.25■■□□□ 1.63
SHCBP1-205ENST00000566016 ZIC5Q96T25 663 aa25.25■■□□□ 1.63
SHCBP1-205ENST00000566016 ARPP21Q9UBL0 812 aaPredicted RBP25.25■■□□□ 1.63
SHCBP1-205ENST00000566016 A0A0D9SFI3 127 aa25.24■■□□□ 1.63
SHCBP1-205ENST00000566016 GJA5P36382 358 aa25.24■■□□□ 1.63
SHCBP1-205ENST00000566016 PPATQ06203 517 aa25.24■■□□□ 1.63
SHCBP1-205ENST00000566016 MCMDC2Q4G0Z9 681 aa25.24■■□□□ 1.63
SHCBP1-205ENST00000566016 FAM227BQ96M60 508 aa25.24■■□□□ 1.63
SHCBP1-205ENST00000566016 WBP1LQ9NX94 342 aa25.24■■□□□ 1.63
SHCBP1-205ENST00000566016 PATL2C9JE40 543 aaKnown RBP25.23■■□□□ 1.63
SHCBP1-205ENST00000566016 CAP2P40123 477 aa25.23■■□□□ 1.63
SHCBP1-205ENST00000566016 NMIQ13287 307 aaPredicted RBP25.23■■□□□ 1.63
SHCBP1-205ENST00000566016 PPIL2Q13356 520 aa25.23■■□□□ 1.63
SHCBP1-205ENST00000566016 SBK1Q52WX2 424 aa25.23■■□□□ 1.63
SHCBP1-205ENST00000566016 C12orf60Q5U649 245 aa25.23■■□□□ 1.63
SHCBP1-205ENST00000566016 TATDN1Q6P1N9 297 aa25.23■■□□□ 1.63
SHCBP1-205ENST00000566016 PICK1Q9NRD5 415 aa25.23■■□□□ 1.63
SHCBP1-205ENST00000566016 GINM1Q9NU53 330 aa25.23■■□□□ 1.63
SHCBP1-205ENST00000566016 MANSC4A6NHS7 340 aaPredicted RBP25.22■■□□□ 1.63
SHCBP1-205ENST00000566016 USP17L12C9JPN9 530 aa25.22■■□□□ 1.63
SHCBP1-205ENST00000566016 USP17L21D6R901 530 aa25.22■■□□□ 1.63
SHCBP1-205ENST00000566016 INHBEP58166 350 aa25.22■■□□□ 1.63
SHCBP1-205ENST00000566016 SREBF2Q12772 1141 aa25.22■■□□□ 1.63
SHCBP1-205ENST00000566016 SLC4A8Q2Y0W8 1093 aa25.22■■□□□ 1.63
SHCBP1-205ENST00000566016 OTUD5Q96G74 571 aa25.22■■□□□ 1.63
SHCBP1-205ENST00000566016 NACAP1Q9BZK3 213 aa25.22■■□□□ 1.63
SHCBP1-205ENST00000566016 EPB41L4AQ9HCS5 686 aaPredicted RBP25.22■■□□□ 1.63
SHCBP1-205ENST00000566016 DIAPH3Q9NSV4 1193 aa25.22■■□□□ 1.63
SHCBP1-205ENST00000566016 CTR9Q6PD62 1173 aa25.21■■□□□ 1.63
SHCBP1-205ENST00000566016 CNKSR2Q8WXI2 1034 aa25.21■■□□□ 1.63
SHCBP1-205ENST00000566016 ROBO3Q96MS0 1386 aa25.21■■□□□ 1.63
SHCBP1-205ENST00000566016 PTPRAP18433 802 aa25.21■■□□□ 1.63
SHCBP1-205ENST00000566016 TM4SF4P48230 202 aa25.21■■□□□ 1.63
SHCBP1-205ENST00000566016 MFAP1P55081 439 aaKnown RBP25.21■■□□□ 1.63
SHCBP1-205ENST00000566016 SWAP70Q9UH65 585 aa25.21■■□□□ 1.63
SHCBP1-205ENST00000566016 FOXP2O15409 715 aa25.2■■□□□ 1.62
SHCBP1-205ENST00000566016 CA12O43570 354 aa25.2■■□□□ 1.62
SHCBP1-205ENST00000566016 ASNSP08243 561 aa25.2■■□□□ 1.62
SHCBP1-205ENST00000566016 MKRN3Q13064 507 aaKnown RBP25.2■■□□□ 1.62
SHCBP1-205ENST00000566016 RRP1BQ14684 758 aaKnown RBP25.2■■□□□ 1.62
SHCBP1-205ENST00000566016 CCDC129Q6ZRS4 1044 aa25.2■■□□□ 1.62
SHCBP1-205ENST00000566016 IFNL3Q8IZI9 196 aa25.2■■□□□ 1.62
SHCBP1-205ENST00000566016 TBC1D2Q9BYX2 928 aa25.2■■□□□ 1.62
SHCBP1-205ENST00000566016 CCDC171Q6TFL3 1326 aa25.19■■□□□ 1.62
SHCBP1-205ENST00000566016 TESPA1A2RU30 521 aaPredicted RBP25.19■■□□□ 1.62
SHCBP1-205ENST00000566016 IRF6O14896 467 aa25.19■■□□□ 1.62
SHCBP1-205ENST00000566016 APPP05067 770 aa25.19■■□□□ 1.62
SHCBP1-205ENST00000566016 CYP2D6P10635 497 aa25.19■■□□□ 1.62
SHCBP1-205ENST00000566016 SHMT1P34896 483 aa25.19■■□□□ 1.62
SHCBP1-205ENST00000566016 TDO2P48775 406 aa25.19■■□□□ 1.62
SHCBP1-205ENST00000566016 GTF2A2P52657 109 aa25.19■■□□□ 1.62
SHCBP1-205ENST00000566016 BMP2KLQ5H9B9 411 aa25.19■■□□□ 1.62
SHCBP1-205ENST00000566016 MS4A4AQ96JQ5 239 aa25.19■■□□□ 1.62
SHCBP1-205ENST00000566016 KCNH4Q9UQ05 1017 aa25.19■■□□□ 1.62
SHCBP1-205ENST00000566016 ZNF589Q86UQ0 364 aaPredicted RBP25.18■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms