RNA–Protein interactions for RNA: ENST00000565908.6

TCF4-230, Transcript of transcription factor 4, humanhuman

TSL 3

Gene TCF4, Length 805 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-230ENST00000565908 FAM196BA6NMK8 535 aa29.15■■■□□ 2.26
TCF4-230ENST00000565908 USP5P45974 858 aa29.15■■■□□ 2.26
TCF4-230ENST00000565908 FOXP4Q8IVH2 680 aaPredicted RBP29.14■■■□□ 2.26
TCF4-230ENST00000565908 EDC3Q96F86 508 aaKnown RBP29.14■■■□□ 2.26
TCF4-230ENST00000565908 MAGEB6P1A0A0J9YX57 407 aa29.13■■■□□ 2.25
TCF4-230ENST00000565908 HLA-DOAP06340 250 aa29.13■■■□□ 2.25
TCF4-230ENST00000565908 ANKRD23Q86SG2 305 aa29.13■■■□□ 2.25
TCF4-230ENST00000565908 GPATCH3Q96I76 525 aa29.13■■■□□ 2.25
TCF4-230ENST00000565908 RIOK1Q9BRS2 568 aaKnown RBP29.13■■■□□ 2.25
TCF4-230ENST00000565908 ECHDC1Q9NTX5 307 aa29.13■■■□□ 2.25
TCF4-230ENST00000565908 PALD1Q9ULE6 856 aa29.13■■■□□ 2.25
TCF4-230ENST00000565908 ZNF532Q9HCE3 1301 aa29.13■■■□□ 2.25
TCF4-230ENST00000565908 METTL16Q86W50 562 aaKnown RBP29.12■■■□□ 2.25
TCF4-230ENST00000565908 ERO1AQ96HE7 468 aa29.12■■■□□ 2.25
TCF4-230ENST00000565908 TRIM34Q9BYJ4 488 aa29.12■■■□□ 2.25
TCF4-230ENST00000565908 DDX24Q9GZR7 859 aaKnown RBP eCLIP29.12■■■□□ 2.251e-6■■■■□ 20.9
TCF4-230ENST00000565908 SAP30BPQ9UHR5 308 aaKnown RBP29.12■■■□□ 2.25
TCF4-230ENST00000565908 AFG3L2Q9Y4W6 797 aa29.12■■■□□ 2.25
TCF4-230ENST00000565908 CCDC85CA6NKD9 419 aa29.11■■■□□ 2.25
TCF4-230ENST00000565908 CAP2P40123 477 aa29.11■■■□□ 2.25
TCF4-230ENST00000565908 SP3Q02447 781 aa29.11■■■□□ 2.25
TCF4-230ENST00000565908 CRACR2BQ8N4Y2 399 aaPredicted RBP29.11■■■□□ 2.25
TCF4-230ENST00000565908 A0A0G2JLL6 359 aaPredicted RBP29.1■■■□□ 2.25
TCF4-230ENST00000565908 TCRBV5S4A2TA0A5A2 114 aa29.1■■■□□ 2.25
TCF4-230ENST00000565908 MOGSQ13724 837 aa29.1■■■□□ 2.25
TCF4-230ENST00000565908 PRRT2Q7Z6L0 340 aaPredicted RBP29.1■■■□□ 2.25
TCF4-230ENST00000565908 TBC1D2Q9BYX2 928 aa29.1■■■□□ 2.25
TCF4-230ENST00000565908 TLR2O60603 784 aa29.09■■■□□ 2.25
TCF4-230ENST00000565908 AAMPQ13685 434 aa29.09■■■□□ 2.25
TCF4-230ENST00000565908 FASTKD5Q7L8L6 764 aaKnown RBP29.09■■■□□ 2.25
TCF4-230ENST00000565908 CRNKL1Q9BZJ0 848 aaKnown RBP29.09■■■□□ 2.25
TCF4-230ENST00000565908 PDHXO00330 501 aa29.08■■■□□ 2.25
TCF4-230ENST00000565908 ADD2P35612 726 aa29.08■■■□□ 2.25
TCF4-230ENST00000565908 DOCK1Q14185 1865 aa29.08■■■□□ 2.25
TCF4-230ENST00000565908 RRP1BQ14684 758 aaKnown RBP29.07■■■□□ 2.24
TCF4-230ENST00000565908 FOCADQ5VW36 1801 aa29.07■■■□□ 2.24
TCF4-230ENST00000565908 FBXO46Q6PJ61 603 aaPredicted RBP29.07■■■□□ 2.24
TCF4-230ENST00000565908 CD99L2Q8TCZ2 262 aa29.07■■■□□ 2.24
TCF4-230ENST00000565908 DNAJC18Q9H819 358 aa29.07■■■□□ 2.24
TCF4-230ENST00000565908 FRMD4AQ9P2Q2 1039 aaPredicted RBP29.07■■■□□ 2.24
TCF4-230ENST00000565908 TRIM75PA6NK02 468 aa29.06■■■□□ 2.24
TCF4-230ENST00000565908 ZSCAN25Q6NSZ9 544 aa29.06■■■□□ 2.24
TCF4-230ENST00000565908 TTC6Q86TZ1 520 aa29.06■■■□□ 2.24
TCF4-230ENST00000565908 TRIM17Q9Y577 477 aa29.06■■■□□ 2.24
TCF4-230ENST00000565908 CDK5RAP2Q96SN8 1893 aa29.06■■■□□ 2.24
TCF4-230ENST00000565908 USP17L5A8MUK1 530 aa29.05■■■□□ 2.24
TCF4-230ENST00000565908 UBE3CQ15386 1083 aa29.05■■■□□ 2.24
TCF4-230ENST00000565908 SLC4A8Q2Y0W8 1093 aa29.05■■■□□ 2.24
TCF4-230ENST00000565908 GPAT2Q6NUI2 795 aa29.05■■■□□ 2.24
TCF4-230ENST00000565908 CCDC84Q86UT8 332 aaPredicted RBP29.05■■■□□ 2.24
TCF4-230ENST00000565908 EHD4Q9H223 541 aa29.05■■■□□ 2.24
TCF4-230ENST00000565908 GINM1Q9NU53 330 aa29.05■■■□□ 2.24
TCF4-230ENST00000565908 ASNSP08243 561 aa29.04■■■□□ 2.24
TCF4-230ENST00000565908 HDAC1Q13547 482 aaPredicted RBP29.04■■■□□ 2.24
TCF4-230ENST00000565908 ARHGEF6Q15052 776 aa29.04■■■□□ 2.24
TCF4-230ENST00000565908 GADL1Q6ZQY3 521 aa29.04■■■□□ 2.24
TCF4-230ENST00000565908 OTOP1Q7RTM1 612 aa29.04■■■□□ 2.24
TCF4-230ENST00000565908 LCORLQ8N3X6 602 aa29.04■■■□□ 2.24
TCF4-230ENST00000565908 ZNF280CQ8ND82 737 aa29.04■■■□□ 2.24
TCF4-230ENST00000565908 PARK7Q99497 189 aaKnown RBP29.04■■■□□ 2.24
TCF4-230ENST00000565908 AS3MTQ9HBK9 375 aa29.04■■■□□ 2.24
TCF4-230ENST00000565908 SERPINB13Q9UIV8 391 aa29.04■■■□□ 2.24
TCF4-230ENST00000565908 HPS5Q9UPZ3 1129 aa29.04■■■□□ 2.24
TCF4-230ENST00000565908 EFCC1Q9HA90 598 aa29.03■■■□□ 2.24
TCF4-230ENST00000565908 ZBTB47Q9UFB7 747 aaPredicted RBP29.03■■■□□ 2.24
TCF4-230ENST00000565908 SIPA1L1O43166 1804 aa29.03■■■□□ 2.24
TCF4-230ENST00000565908 TTC41PQ6P2S7 1318 aa29.02■■■□□ 2.24
TCF4-230ENST00000565908 SPP2Q13103 211 aa29.02■■■□□ 2.24
TCF4-230ENST00000565908 GCC1Q96CN9 775 aa29.02■■■□□ 2.24
TCF4-230ENST00000565908 ARMT1Q9H993 441 aa29.02■■■□□ 2.24
TCF4-230ENST00000565908 SLC45A1Q9Y2W3 748 aa29.02■■■□□ 2.24
TCF4-230ENST00000565908 POLR3DP05423 398 aaPredicted RBP29.01■■■□□ 2.23
TCF4-230ENST00000565908 TSHZ3Q63HK5 1081 aa29.01■■■□□ 2.23
TCF4-230ENST00000565908 ERC2O15083 957 aa29■■■□□ 2.23
TCF4-230ENST00000565908 MBD4O95243 580 aa29■■■□□ 2.23
TCF4-230ENST00000565908 KIF22Q14807 665 aa29■■■□□ 2.23
TCF4-230ENST00000565908 SLFNL1Q499Z3 407 aa29■■■□□ 2.23
TCF4-230ENST00000565908 C17orf99Q6UX52 265 aa29■■■□□ 2.23
TCF4-230ENST00000565908 KBTBD3Q8NAB2 608 aa29■■■□□ 2.23
TCF4-230ENST00000565908 SDR42E1Q8WUS8 393 aa29■■■□□ 2.23
TCF4-230ENST00000565908 MCM9Q9NXL9 1143 aa29■■■□□ 2.23
TCF4-230ENST00000565908 GDF11O95390 407 aa28.99■■■□□ 2.23
TCF4-230ENST00000565908 TATDN1Q6P1N9 297 aa28.99■■■□□ 2.23
TCF4-230ENST00000565908 PROCA1Q8NCQ7 364 aaPredicted RBP28.99■■■□□ 2.23
TCF4-230ENST00000565908 WDR18Q9BV38 432 aa28.99■■■□□ 2.23
TCF4-230ENST00000565908 DCP1AQ9NPI6 582 aaPredicted RBP28.99■■■□□ 2.23
TCF4-230ENST00000565908 CPA4Q9UI42 421 aa28.99■■■□□ 2.23
TCF4-230ENST00000565908 ZBTB21Q9ULJ3 1066 aa28.99■■■□□ 2.23
TCF4-230ENST00000565908 AGTPBP1Q9UPW5 1226 aa28.99■■■□□ 2.23
TCF4-230ENST00000565908 ADGRA2Q96PE1 1338 aa28.98■■■□□ 2.23
TCF4-230ENST00000565908 PLCD1P51178 756 aa28.98■■■□□ 2.23
TCF4-230ENST00000565908 ANKRD45Q5TZF3 282 aa28.98■■■□□ 2.23
TCF4-230ENST00000565908 ATP8A2Q9NTI2 1148 aa28.98■■■□□ 2.23
TCF4-230ENST00000565908 PHIPQ8WWQ0 1821 aa28.98■■■□□ 2.23
TCF4-230ENST00000565908 GLRX3O76003 335 aaKnown RBP28.97■■■□□ 2.23
TCF4-230ENST00000565908 CYP2C8P10632 490 aa28.97■■■□□ 2.23
TCF4-230ENST00000565908 JAG1P78504 1218 aa28.97■■■□□ 2.23
TCF4-230ENST00000565908 LACTBP83111 547 aaPredicted RBP28.97■■■□□ 2.23
TCF4-230ENST00000565908 PTPN22Q9Y2R2 807 aa28.97■■■□□ 2.23
TCF4-230ENST00000565908 MYH1P12882 1939 aa28.96■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms