RNA–Protein interactions for RNA: ENST00000564747.1

GTF3C1-205, Transcript of general transcription factor IIIC subunit 1, humanhuman

Gene GTF3C1, Length 2,798 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-205ENST00000564747 MROH5Q6ZUA9 1318 aa17.77■□□□□ 0.44
GTF3C1-205ENST00000564747 POLR2DO15514 142 aaKnown RBP17.77■□□□□ 0.44
GTF3C1-205ENST00000564747 NR5A1Q13285 461 aa17.77■□□□□ 0.44
GTF3C1-205ENST00000564747 TRIM65Q6PJ69 517 aa17.77■□□□□ 0.44
GTF3C1-205ENST00000564747 LCORLQ8N3X6 602 aa17.77■□□□□ 0.44
GTF3C1-205ENST00000564747 CNNM2Q9H8M5 875 aa17.77■□□□□ 0.44
GTF3C1-205ENST00000564747 SAFBQ15424 915 aaKnown RBP eCLIP17.77■□□□□ 0.43
GTF3C1-205ENST00000564747 KRT23Q9C075 422 aa17.77■□□□□ 0.43
GTF3C1-205ENST00000564747 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.77■□□□□ 0.43
GTF3C1-205ENST00000564747 FANCGO15287 622 aa17.76■□□□□ 0.43
GTF3C1-205ENST00000564747 PRR29P0C7W0 189 aa17.76■□□□□ 0.43
GTF3C1-205ENST00000564747 SLC5A1P13866 664 aa17.76■□□□□ 0.43
GTF3C1-205ENST00000564747 TDO2P48775 406 aa17.76■□□□□ 0.43
GTF3C1-205ENST00000564747 RTN1Q16799 776 aa17.76■□□□□ 0.43
GTF3C1-205ENST00000564747 ZNF827Q17R98 1081 aa17.76■□□□□ 0.43
GTF3C1-205ENST00000564747 GRAMD1CQ8IYS0 662 aa17.76■□□□□ 0.43
GTF3C1-205ENST00000564747 WASF1Q92558 559 aa17.76■□□□□ 0.43
GTF3C1-205ENST00000564747 SEC31BQ9NQW1 1179 aa17.76■□□□□ 0.43
GTF3C1-205ENST00000564747 ZNF446Q9NWS9 450 aa17.76■□□□□ 0.43
GTF3C1-205ENST00000564747 SERTAD1Q9UHV2 236 aa17.76■□□□□ 0.43
GTF3C1-205ENST00000564747 FBXO2Q9UK22 296 aaPredicted RBP17.76■□□□□ 0.43
GTF3C1-205ENST00000564747 MAN1B1Q9UKM7 699 aa17.76■□□□□ 0.43
GTF3C1-205ENST00000564747 PCDHB6Q9Y5E3 794 aa17.76■□□□□ 0.43
GTF3C1-205ENST00000564747 ATP2B1P20020 1258 aa17.76■□□□□ 0.43
GTF3C1-205ENST00000564747 BCAMP50895 628 aa17.76■□□□□ 0.43
GTF3C1-205ENST00000564747 WTAPQ15007 396 aa17.76■□□□□ 0.43
GTF3C1-205ENST00000564747 REXO1L1PQ8IX06 675 aa17.76■□□□□ 0.43
GTF3C1-205ENST00000564747 SLC4A4Q9Y6R1 1079 aa17.76■□□□□ 0.43
GTF3C1-205ENST00000564747 PTPREP23469 700 aa17.75■□□□□ 0.43
GTF3C1-205ENST00000564747 FMR1Q06787 632 aaKnown RBP eCLIP17.75■□□□□ 0.43
GTF3C1-205ENST00000564747 POSTNQ15063 836 aa17.75■□□□□ 0.43
GTF3C1-205ENST00000564747 TRIM22Q8IYM9 498 aa17.75■□□□□ 0.43
GTF3C1-205ENST00000564747 ZNF34Q8IZ26 560 aa17.75■□□□□ 0.43
GTF3C1-205ENST00000564747 PDILTQ8N807 584 aa17.75■□□□□ 0.43
GTF3C1-205ENST00000564747 MIGA1Q8NAN2 632 aa17.75■□□□□ 0.43
GTF3C1-205ENST00000564747 LRP6O75581 1613 aa17.75■□□□□ 0.43
GTF3C1-205ENST00000564747 TUBB4AP04350 444 aa17.75■□□□□ 0.43
GTF3C1-205ENST00000564747 OXER1Q8TDS5 423 aa17.75■□□□□ 0.43
GTF3C1-205ENST00000564747 MPHOSPH8Q99549 860 aa17.75■□□□□ 0.43
GTF3C1-205ENST00000564747 CCP110O43303 1012 aa17.74■□□□□ 0.43
GTF3C1-205ENST00000564747 USP49Q70CQ1 688 aa17.74■□□□□ 0.43
GTF3C1-205ENST00000564747 TMEM139Q8IV31 216 aa17.74■□□□□ 0.43
GTF3C1-205ENST00000564747 KRT222Q8N1A0 295 aa17.74■□□□□ 0.43
GTF3C1-205ENST00000564747 CRACR2BQ8N4Y2 399 aaPredicted RBP17.74■□□□□ 0.43
GTF3C1-205ENST00000564747 NUP133Q8WUM0 1156 aa17.74■□□□□ 0.43
GTF3C1-205ENST00000564747 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.74■□□□□ 0.43
GTF3C1-205ENST00000564747 ERVV-1B6SEH8 477 aa17.74■□□□□ 0.43
GTF3C1-205ENST00000564747 TRMT44Q8IYL2 757 aaKnown RBP17.74■□□□□ 0.43
GTF3C1-205ENST00000564747 STAG1Q8WVM7 1258 aa17.74■□□□□ 0.43
GTF3C1-205ENST00000564747 FOXP1Q9H334 677 aaPredicted RBP17.74■□□□□ 0.43
GTF3C1-205ENST00000564747 BTG4Q9NY30 223 aa17.74■□□□□ 0.43
GTF3C1-205ENST00000564747 FAM53CQ9NYF3 392 aa17.74■□□□□ 0.43
GTF3C1-205ENST00000564747 NFE2L3Q9Y4A8 694 aa17.74■□□□□ 0.43
GTF3C1-205ENST00000564747 NUP98P52948 1817 aa17.74■□□□□ 0.43
GTF3C1-205ENST00000564747 XIRP1Q702N8 1843 aaKnown RBP17.74■□□□□ 0.43
GTF3C1-205ENST00000564747 H2AFXP16104 143 aaPredicted RBP17.74■□□□□ 0.43
GTF3C1-205ENST00000564747 SART3Q15020 963 aaKnown RBP17.74■□□□□ 0.43
GTF3C1-205ENST00000564747 RILPL1Q5EBL4 403 aa17.74■□□□□ 0.43
GTF3C1-205ENST00000564747 SUSD4Q5VX71 490 aa17.74■□□□□ 0.43
GTF3C1-205ENST00000564747 FAM177A1Q8N128 213 aaPredicted RBP17.74■□□□□ 0.43
GTF3C1-205ENST00000564747 NACAP1Q9BZK3 213 aa17.74■□□□□ 0.43
GTF3C1-205ENST00000564747 HOOK1Q9UJC3 728 aaKnown RBP17.74■□□□□ 0.43
GTF3C1-205ENST00000564747 PHLPP2Q6ZVD8 1323 aa17.73■□□□□ 0.43
GTF3C1-205ENST00000564747 ITGB4P16144 1822 aa17.73■□□□□ 0.43
GTF3C1-205ENST00000564747 MYO1BO43795 1136 aa17.73■□□□□ 0.43
GTF3C1-205ENST00000564747 CDK11BP21127 795 aaKnown RBP17.73■□□□□ 0.43
GTF3C1-205ENST00000564747 ELOA2Q8IYF1 753 aaPredicted RBP17.73■□□□□ 0.43
GTF3C1-205ENST00000564747 BCL9O00512 1426 aa17.73■□□□□ 0.43
GTF3C1-205ENST00000564747 DEXIO95424 95 aa17.73■□□□□ 0.43
GTF3C1-205ENST00000564747 SARSP49591 514 aaKnown RBP17.73■□□□□ 0.43
GTF3C1-205ENST00000564747 FANCBQ8NB91 859 aa17.73■□□□□ 0.43
GTF3C1-205ENST00000564747 MED15Q96RN5 788 aa17.73■□□□□ 0.43
GTF3C1-205ENST00000564747 CABP5Q9NP86 173 aa17.73■□□□□ 0.43
GTF3C1-205ENST00000564747 ERICH2A1L162 156 aa17.72■□□□□ 0.43
GTF3C1-205ENST00000564747 SMIM22K7EJ46 135 aa17.72■□□□□ 0.43
GTF3C1-205ENST00000564747 URI1O94763 535 aaPredicted RBP17.72■□□□□ 0.43
GTF3C1-205ENST00000564747 ADKP55263 362 aaKnown RBP17.72■□□□□ 0.43
GTF3C1-205ENST00000564747 TBX2Q13207 712 aaPredicted RBP17.72■□□□□ 0.43
GTF3C1-205ENST00000564747 ARHGAP29Q52LW3 1261 aa17.72■□□□□ 0.43
GTF3C1-205ENST00000564747 NT5DC1Q5TFE4 455 aa17.72■□□□□ 0.43
GTF3C1-205ENST00000564747 TAF3Q5VWG9 929 aa17.72■□□□□ 0.43
GTF3C1-205ENST00000564747 SMARCE1Q969G3 411 aa17.72■□□□□ 0.43
GTF3C1-205ENST00000564747 PPP2R2CQ9Y2T4 447 aa17.72■□□□□ 0.43
GTF3C1-205ENST00000564747 SLIT2O94813 1529 aa17.72■□□□□ 0.43
GTF3C1-205ENST00000564747 CHD4Q14839 1912 aa17.72■□□□□ 0.43
GTF3C1-205ENST00000564747 VWA3AA6NCI4 1184 aa17.72■□□□□ 0.43
GTF3C1-205ENST00000564747 SLFN14P0C7P3 912 aa17.72■□□□□ 0.43
GTF3C1-205ENST00000564747 ZNF18P17022 549 aa17.72■□□□□ 0.43
GTF3C1-205ENST00000564747 IL6STP40189 918 aaPredicted RBP17.72■□□□□ 0.43
GTF3C1-205ENST00000564747 IQSEC3Q9UPP2 1182 aaPredicted RBP17.72■□□□□ 0.43
GTF3C1-205ENST00000564747 NID2Q14112 1375 aa17.71■□□□□ 0.43
GTF3C1-205ENST00000564747 ANKRD36CQ5JPF3 1778 aa17.71■□□□□ 0.43
GTF3C1-205ENST00000564747 ARHGAP6O43182 974 aa17.71■□□□□ 0.43
GTF3C1-205ENST00000564747 MORC3Q14149 939 aa17.71■□□□□ 0.43
GTF3C1-205ENST00000564747 ZNF654Q8IZM8 581 aa17.71■□□□□ 0.43
GTF3C1-205ENST00000564747 MLKLQ8NB16 471 aa17.71■□□□□ 0.43
GTF3C1-205ENST00000564747 CSRNP2Q9H175 543 aa17.71■□□□□ 0.43
GTF3C1-205ENST00000564747 SAMSN1Q9NSI8 373 aaKnown RBP17.71■□□□□ 0.43
GTF3C1-205ENST00000564747 LRP2BPQ9P2M1 347 aa17.71■□□□□ 0.43
GTF3C1-205ENST00000564747 SRPRBQ9Y5M8 271 aaKnown RBP17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms