RNA–Protein interactions for RNA: ENST00000564255.5

CHD9-209, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 2,896 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-209ENST00000564255 KLHDC7BQ96G42 594 aa3.73□□□□□ -1.81
CHD9-209ENST00000564255 LTBP3Q9NS15 1303 aa3.73□□□□□ -1.81
CHD9-209ENST00000564255 HNRNPUQ00839 825 aaKnown RBP eCLIP3.73□□□□□ -1.81
CHD9-209ENST00000564255 MLECQ14165 292 aa3.73□□□□□ -1.81
CHD9-209ENST00000564255 NCAPHQ15003 741 aa3.73□□□□□ -1.81
CHD9-209ENST00000564255 SETDB1Q15047 1291 aa3.73□□□□□ -1.81
CHD9-209ENST00000564255 C6orf15Q6UXA7 325 aaPredicted RBP3.73□□□□□ -1.81
CHD9-209ENST00000564255 C8orf86Q6ZUL3 223 aa3.73□□□□□ -1.81
CHD9-209ENST00000564255 C16orf86Q6ZW13 317 aa3.73□□□□□ -1.81
CHD9-209ENST00000564255 GALNT11Q8NCW6 608 aa3.73□□□□□ -1.81
CHD9-209ENST00000564255 ZCRB1Q8TBF4 217 aaKnown RBP3.73□□□□□ -1.81
CHD9-209ENST00000564255 KLHL6Q8WZ60 621 aa3.73□□□□□ -1.81
CHD9-209ENST00000564255 ACSBG1Q96GR2 724 aa3.73□□□□□ -1.81
CHD9-209ENST00000564255 WDR18Q9BV38 432 aa3.73□□□□□ -1.81
CHD9-209ENST00000564255 CARD10Q9BWT7 1032 aa3.73□□□□□ -1.81
CHD9-209ENST00000564255 COL25A1Q9BXS0 654 aaPredicted RBP3.73□□□□□ -1.81
CHD9-209ENST00000564255 WNT10AQ9GZT5 417 aa3.73□□□□□ -1.81
CHD9-209ENST00000564255 IFT57Q9NWB7 429 aa3.73□□□□□ -1.81
CHD9-209ENST00000564255 LEMD3Q9Y2U8 911 aa3.73□□□□□ -1.81
CHD9-209ENST00000564255 KDM2BQ8NHM5 1336 aa3.73□□□□□ -1.81
CHD9-209ENST00000564255 CCDC85CA6NKD9 419 aa3.73□□□□□ -1.81
CHD9-209ENST00000564255 DIAPH1O60610 1272 aaKnown RBP3.73□□□□□ -1.81
CHD9-209ENST00000564255 PPP2R5EQ16537 467 aa3.73□□□□□ -1.81
CHD9-209ENST00000564255 HP1BP3Q5SSJ5 553 aaPredicted RBP3.73□□□□□ -1.81
CHD9-209ENST00000564255 CHSY3Q70JA7 882 aa3.73□□□□□ -1.81
CHD9-209ENST00000564255 NLRC3Q7RTR2 1065 aa3.73□□□□□ -1.81
CHD9-209ENST00000564255 ELMO3Q96BJ8 720 aa3.73□□□□□ -1.81
CHD9-209ENST00000564255 BTBD6Q96KE9 485 aa3.73□□□□□ -1.81
CHD9-209ENST00000564255 NOP58Q9Y2X3 529 aaKnown RBP3.73□□□□□ -1.81
CHD9-209ENST00000564255 DCDC2CA8MYV0 355 aa3.72□□□□□ -1.81
CHD9-209ENST00000564255 LILRB5O75023 590 aa3.72□□□□□ -1.81
CHD9-209ENST00000564255 DNAJC6O75061 913 aa3.72□□□□□ -1.81
CHD9-209ENST00000564255 AOC2O75106 756 aa3.72□□□□□ -1.81
CHD9-209ENST00000564255 NID1P14543 1247 aa3.72□□□□□ -1.81
CHD9-209ENST00000564255 PLCG1P19174 1290 aa3.72□□□□□ -1.81
CHD9-209ENST00000564255 CDC25BP30305 580 aa3.72□□□□□ -1.81
CHD9-209ENST00000564255 IGBP1P78318 339 aa3.72□□□□□ -1.81
CHD9-209ENST00000564255 PDE4BQ07343 736 aa3.72□□□□□ -1.81
CHD9-209ENST00000564255 ZYXQ15942 572 aaKnown RBP3.72□□□□□ -1.81
CHD9-209ENST00000564255 MTERF2Q49AM1 385 aa3.72□□□□□ -1.81
CHD9-209ENST00000564255 FILIP1Q7Z7B0 1213 aa3.72□□□□□ -1.81
CHD9-209ENST00000564255 SLC9A7Q96T83 725 aa3.72□□□□□ -1.81
CHD9-209ENST00000564255 EPN3Q9H201 632 aa3.72□□□□□ -1.81
CHD9-209ENST00000564255 PHAXQ9H814 394 aaKnown RBP3.72□□□□□ -1.81
CHD9-209ENST00000564255 SPC25Q9HBM1 224 aa3.72□□□□□ -1.81
CHD9-209ENST00000564255 LRRC4BQ9NT99 713 aa3.72□□□□□ -1.81
CHD9-209ENST00000564255 COL4A3BPQ9Y5P4 624 aa3.72□□□□□ -1.81
CHD9-209ENST00000564255 PTCH2Q9Y6C5 1203 aa3.72□□□□□ -1.81
CHD9-209ENST00000564255 LOC100289279A0A1B0GTE1 492 aa3.72□□□□□ -1.81
CHD9-209ENST00000564255 M0R082 166 aa3.72□□□□□ -1.81
CHD9-209ENST00000564255 ADAM11O75078 769 aa3.72□□□□□ -1.81
CHD9-209ENST00000564255 DDAH1O94760 285 aa3.72□□□□□ -1.81
CHD9-209ENST00000564255 GRK4P32298 578 aa3.72□□□□□ -1.81
CHD9-209ENST00000564255 ERVK-24P63145 666 aa3.72□□□□□ -1.81
CHD9-209ENST00000564255 KRT76Q01546 638 aa3.72□□□□□ -1.81
CHD9-209ENST00000564255 PDE3AQ14432 1141 aa3.72□□□□□ -1.81
CHD9-209ENST00000564255 LONRF2Q1L5Z9 754 aa3.72□□□□□ -1.81
CHD9-209ENST00000564255 SPATC1Q76KD6 591 aa3.72□□□□□ -1.81
CHD9-209ENST00000564255 SYNPOQ8N3V7 929 aa3.72□□□□□ -1.81
CHD9-209ENST00000564255 ZNF417Q8TAU3 575 aa3.72□□□□□ -1.81
CHD9-209ENST00000564255 EDARADDQ8WWZ3 215 aa3.72□□□□□ -1.81
CHD9-209ENST00000564255 ACSF2Q96CM8 615 aaPredicted RBP3.72□□□□□ -1.81
CHD9-209ENST00000564255 ZNF587Q96SQ5 575 aaPredicted RBP3.72□□□□□ -1.81
CHD9-209ENST00000564255 ZNF214Q9UL59 606 aaPredicted RBP3.72□□□□□ -1.81
CHD9-209ENST00000564255 HIF3AQ9Y2N7 669 aa3.72□□□□□ -1.81
CHD9-209ENST00000564255 hCG_2014768A0A024R1R8 64 aa3.71□□□□□ -1.82
CHD9-209ENST00000564255 CHURC1-FNTBB4DL54 471 aa3.71□□□□□ -1.82
CHD9-209ENST00000564255 PPP1R12AO14974 1030 aaPredicted RBP3.71□□□□□ -1.82
CHD9-209ENST00000564255 TMPRSS2O15393 492 aa3.71□□□□□ -1.82
CHD9-209ENST00000564255 DLGAP3O95886 979 aa3.71□□□□□ -1.82
CHD9-209ENST00000564255 GYS2P54840 703 aa3.71□□□□□ -1.82
CHD9-209ENST00000564255 FOXD4L6Q3SYB3 417 aaPredicted RBP3.71□□□□□ -1.82
CHD9-209ENST00000564255 VHLLQ6RSH7 139 aa3.71□□□□□ -1.82
CHD9-209ENST00000564255 FOXD4L3Q6VB84 417 aaPredicted RBP3.71□□□□□ -1.82
CHD9-209ENST00000564255 EEPD1Q7L9B9 569 aa3.71□□□□□ -1.82
CHD9-209ENST00000564255 DTWD1Q8N5C7 304 aa3.71□□□□□ -1.82
CHD9-209ENST00000564255 SPATA9Q9BWV2 254 aa3.71□□□□□ -1.82
CHD9-209ENST00000564255 SLKQ9H2G2 1235 aaPredicted RBP3.71□□□□□ -1.82
CHD9-209ENST00000564255 PCDH12Q9NPG4 1184 aa3.71□□□□□ -1.82
CHD9-209ENST00000564255 SUSD5O60279 629 aa3.71□□□□□ -1.82
CHD9-209ENST00000564255 CCNFP41002 786 aa3.71□□□□□ -1.82
CHD9-209ENST00000564255 ZC3H12BQ5HYM0 836 aaKnown RBP3.71□□□□□ -1.82
CHD9-209ENST00000564255 ZBTB37Q5TC79 503 aa3.71□□□□□ -1.82
CHD9-209ENST00000564255 ZNF787Q6DD87 383 aa3.71□□□□□ -1.82
CHD9-209ENST00000564255 FEZ1Q99689 392 aa3.71□□□□□ -1.82
CHD9-209ENST00000564255 KCNK4Q9NYG8 393 aa3.71□□□□□ -1.82
CHD9-209ENST00000564255 TJP2Q9UDY2 1190 aa3.71□□□□□ -1.82
CHD9-209ENST00000564255 MEGF11A6BM72 1044 aa3.7□□□□□ -1.82
CHD9-209ENST00000564255 OIP5O43482 229 aa3.7□□□□□ -1.82
CHD9-209ENST00000564255 PGRP06401 933 aa3.7□□□□□ -1.82
CHD9-209ENST00000564255 FAM153BP0C7A2 387 aa3.7□□□□□ -1.82
CHD9-209ENST00000564255 SLFN14P0C7P3 912 aa3.7□□□□□ -1.82
CHD9-209ENST00000564255 SLURP2P0DP57 97 aa3.7□□□□□ -1.82
CHD9-209ENST00000564255 IBSPP21815 317 aaPredicted RBP3.7□□□□□ -1.82
CHD9-209ENST00000564255 CAP2P40123 477 aa3.7□□□□□ -1.82
CHD9-209ENST00000564255 ZNF143P52747 638 aaPredicted RBP3.7□□□□□ -1.82
CHD9-209ENST00000564255 ID3Q02535 119 aa3.7□□□□□ -1.82
CHD9-209ENST00000564255 TKFCQ3LXA3 575 aa3.7□□□□□ -1.82
CHD9-209ENST00000564255 EXOSC6Q5RKV6 272 aaKnown RBP3.7□□□□□ -1.82
CHD9-209ENST00000564255 SLC6A19Q695T7 634 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 171.2 ms