RNA–Protein interactions for RNA: ENST00000564054.1

SH3GL3-206, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

TSL 2

Gene SH3GL3, Length 758 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-206ENST00000564054 NEFLP07196 543 aa7.48□□□□□ -1.21
SH3GL3-206ENST00000564054 PDIA4P13667 645 aaKnown RBP7.48□□□□□ -1.21
SH3GL3-206ENST00000564054 SSFA2P28290 1259 aa7.48□□□□□ -1.21
SH3GL3-206ENST00000564054 FKBP4Q02790 459 aaKnown RBP eCLIP7.48□□□□□ -1.21
SH3GL3-206ENST00000564054 TCF12Q99081 682 aa7.48□□□□□ -1.21
SH3GL3-206ENST00000564054 TRIM56Q9BRZ2 755 aaKnown RBP7.48□□□□□ -1.21
SH3GL3-206ENST00000564054 WDR18Q9BV38 432 aa7.48□□□□□ -1.21
SH3GL3-206ENST00000564054 MYO5CQ9NQX4 1742 aa7.48□□□□□ -1.21
SH3GL3-206ENST00000564054 CCDC87Q9NVE4 849 aa7.48□□□□□ -1.21
SH3GL3-206ENST00000564054 CDC42BPBQ9Y5S2 1711 aa7.48□□□□□ -1.21
SH3GL3-206ENST00000564054 ABL1P00519 1130 aa7.47□□□□□ -1.21
SH3GL3-206ENST00000564054 FAM87AP0C7U9 286 aa7.47□□□□□ -1.21
SH3GL3-206ENST00000564054 FUT4P22083 530 aa7.47□□□□□ -1.21
SH3GL3-206ENST00000564054 AP3B2Q13367 1082 aa7.47□□□□□ -1.21
SH3GL3-206ENST00000564054 PLD6Q8N2A8 252 aaKnown RBP7.47□□□□□ -1.21
SH3GL3-206ENST00000564054 PI4K2BQ8TCG2 481 aa7.47□□□□□ -1.21
SH3GL3-206ENST00000564054 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.47□□□□□ -1.21
SH3GL3-206ENST00000564054 KDM6BO15054 1643 aa7.47□□□□□ -1.21
SH3GL3-206ENST00000564054 PREX2Q70Z35 1606 aa7.47□□□□□ -1.21
SH3GL3-206ENST00000564054 SYNGAP1Q96PV0 1343 aa7.47□□□□□ -1.21
SH3GL3-206ENST00000564054 SLFN14P0C7P3 912 aa7.46□□□□□ -1.22
SH3GL3-206ENST00000564054 CD8BP10966 210 aa7.46□□□□□ -1.22
SH3GL3-206ENST00000564054 KRTAP4-9Q9BYQ8 210 aa7.46□□□□□ -1.22
SH3GL3-206ENST00000564054 EHD4Q9H223 541 aa7.46□□□□□ -1.22
SH3GL3-206ENST00000564054 ATXN3LQ9H3M9 355 aa7.46□□□□□ -1.22
SH3GL3-206ENST00000564054 ZNF576Q9H609 170 aa7.46□□□□□ -1.22
SH3GL3-206ENST00000564054 VAV3Q9UKW4 847 aa7.46□□□□□ -1.22
SH3GL3-206ENST00000564054 PPP1R9AQ9ULJ8 1098 aa7.46□□□□□ -1.22
SH3GL3-206ENST00000564054 ABCC10Q5T3U5 1492 aa7.46□□□□□ -1.22
SH3GL3-206ENST00000564054 ARHGEF5Q12774 1597 aa7.46□□□□□ -1.22
SH3GL3-206ENST00000564054 ANKRD30AQ9BXX3 1397 aa7.46□□□□□ -1.22
SH3GL3-206ENST00000564054 ADGRL2O95490 1459 aa7.45□□□□□ -1.22
SH3GL3-206ENST00000564054 SHANK2Q9UPX8 1470 aa7.45□□□□□ -1.22
SH3GL3-206ENST00000564054 TMEM88BA6NKF7 163 aa7.45□□□□□ -1.22
SH3GL3-206ENST00000564054 CDK5R2Q13319 367 aa7.45□□□□□ -1.22
SH3GL3-206ENST00000564054 B4GALNT3Q6L9W6 998 aa7.45□□□□□ -1.22
SH3GL3-206ENST00000564054 WFDC3Q8IUB2 231 aa7.45□□□□□ -1.22
SH3GL3-206ENST00000564054 FAM181AQ8N9Y4 354 aa7.45□□□□□ -1.22
SH3GL3-206ENST00000564054 GLIS3Q8NEA6 775 aa7.45□□□□□ -1.22
SH3GL3-206ENST00000564054 TMEM40Q8WWA1 233 aa7.45□□□□□ -1.22
SH3GL3-206ENST00000564054 MPHOSPH9Q99550 1183 aa7.45□□□□□ -1.22
SH3GL3-206ENST00000564054 CLASP1Q7Z460 1538 aa7.45□□□□□ -1.22
SH3GL3-206ENST00000564054 ABCC2Q92887 1545 aa7.45□□□□□ -1.22
SH3GL3-206ENST00000564054 ZNF644Q9H582 1327 aaPredicted RBP7.45□□□□□ -1.22
SH3GL3-206ENST00000564054 RNASE1P07998 156 aaKnown RBP7.44□□□□□ -1.22
SH3GL3-206ENST00000564054 TSPY4P0CV99 314 aa7.44□□□□□ -1.22
SH3GL3-206ENST00000564054 TSPY10P0CW01 314 aa7.44□□□□□ -1.22
SH3GL3-206ENST00000564054 PRKCQQ04759 706 aa7.44□□□□□ -1.22
SH3GL3-206ENST00000564054 IFI16Q16666 785 aaKnown RBP7.44□□□□□ -1.22
SH3GL3-206ENST00000564054 FBLN7Q53RD9 439 aa7.44□□□□□ -1.22
SH3GL3-206ENST00000564054 KIAA0319Q5VV43 1072 aa7.44□□□□□ -1.22
SH3GL3-206ENST00000564054 NCOA1Q15788 1441 aa7.44□□□□□ -1.22
SH3GL3-206ENST00000564054 TMPRSS2O15393 492 aa7.43□□□□□ -1.22
SH3GL3-206ENST00000564054 LIG1P18858 919 aa7.43□□□□□ -1.22
SH3GL3-206ENST00000564054 AOC3Q16853 763 aa7.43□□□□□ -1.22
SH3GL3-206ENST00000564054 SMYD4Q8IYR2 804 aaPredicted RBP7.43□□□□□ -1.22
SH3GL3-206ENST00000564054 HRASLS5Q96KN8 279 aa7.43□□□□□ -1.22
SH3GL3-206ENST00000564054 ANO2Q9NQ90 1003 aa7.43□□□□□ -1.22
SH3GL3-206ENST00000564054 ZCCHC11Q5TAX3 1644 aaKnown RBP7.42□□□□□ -1.22
SH3GL3-206ENST00000564054 CARNS1A5YM72 827 aa7.42□□□□□ -1.22
SH3GL3-206ENST00000564054 RNGTTO60942 597 aaKnown RBP7.42□□□□□ -1.22
SH3GL3-206ENST00000564054 ITPKAP23677 461 aa7.42□□□□□ -1.22
SH3GL3-206ENST00000564054 ID3Q02535 119 aa7.42□□□□□ -1.22
SH3GL3-206ENST00000564054 ZNF211Q13398 564 aaPredicted RBP7.42□□□□□ -1.22
SH3GL3-206ENST00000564054 FANCD2OSQ96PS1 177 aa7.42□□□□□ -1.22
SH3GL3-206ENST00000564054 MKNK2Q9HBH9 465 aa7.42□□□□□ -1.22
SH3GL3-206ENST00000564054 MBNL3Q9NUK0 354 aaKnown RBP7.42□□□□□ -1.22
SH3GL3-206ENST00000564054 CRIM1Q9NZV1 1036 aa7.42□□□□□ -1.22
SH3GL3-206ENST00000564054 BRPF3Q9ULD4 1205 aa7.42□□□□□ -1.22
SH3GL3-206ENST00000564054 UHRF1BP1LA0JNW5 1464 aa7.42□□□□□ -1.22
SH3GL3-206ENST00000564054 PLEKHH2Q8IVE3 1493 aa7.42□□□□□ -1.22
SH3GL3-206ENST00000564054 PTPN12Q05209 780 aaKnown RBP7.41□□□□□ -1.22
SH3GL3-206ENST00000564054 ANGEL2Q5VTE6 544 aaKnown RBP7.41□□□□□ -1.22
SH3GL3-206ENST00000564054 LRRN4CLQ8ND94 238 aa7.41□□□□□ -1.22
SH3GL3-206ENST00000564054 ZC3H12CQ9C0D7 883 aaKnown RBP7.41□□□□□ -1.22
SH3GL3-206ENST00000564054 ADAMTS6Q9UKP5 1117 aa7.41□□□□□ -1.22
SH3GL3-206ENST00000564054 C9orf84Q5VXU9 1444 aa7.41□□□□□ -1.22
SH3GL3-206ENST00000564054 SAMD9LQ8IVG5 1584 aa7.41□□□□□ -1.22
SH3GL3-206ENST00000564054 POLR1AO95602 1720 aaPredicted RBP7.41□□□□□ -1.22
SH3GL3-206ENST00000564054 TMEM265A0A087WTH1 108 aa7.4□□□□□ -1.22
SH3GL3-206ENST00000564054 CD96P40200 585 aa7.4□□□□□ -1.22
SH3GL3-206ENST00000564054 USPL1Q5W0Q7 1092 aa7.4□□□□□ -1.22
SH3GL3-206ENST00000564054 FAM84AQ96KN4 292 aa7.4□□□□□ -1.22
SH3GL3-206ENST00000564054 TRAIPQ9BWF2 469 aa7.4□□□□□ -1.22
SH3GL3-206ENST00000564054 SSU72Q9NP77 194 aaKnown RBP7.4□□□□□ -1.22
SH3GL3-206ENST00000564054 NPHS2Q9NP85 383 aa7.4□□□□□ -1.22
SH3GL3-206ENST00000564054 CCDC141Q6ZP82 1450 aa7.4□□□□□ -1.22
SH3GL3-206ENST00000564054 ARHGAP5Q13017 1502 aa7.4□□□□□ -1.22
SH3GL3-206ENST00000564054 ERCC6L2Q5T890 1561 aa7.4□□□□□ -1.22
SH3GL3-206ENST00000564054 MAST1Q9Y2H9 1570 aa7.4□□□□□ -1.22
SH3GL3-206ENST00000564054 TTC37Q6PGP7 1564 aa7.39□□□□□ -1.23
SH3GL3-206ENST00000564054 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.39□□□□□ -1.23
SH3GL3-206ENST00000564054 RPRD2Q5VT52 1461 aaKnown RBP7.39□□□□□ -1.23
SH3GL3-206ENST00000564054 ANKRD50Q9ULJ7 1429 aa7.39□□□□□ -1.23
SH3GL3-206ENST00000564054 ANKRD30BQ9BXX2 1392 aa7.39□□□□□ -1.23
SH3GL3-206ENST00000564054 LRRC10BA6NIK2 292 aa7.39□□□□□ -1.23
SH3GL3-206ENST00000564054 CPNE3O75131 537 aaKnown RBP7.39□□□□□ -1.23
SH3GL3-206ENST00000564054 CEACAM5P06731 702 aa7.39□□□□□ -1.23
SH3GL3-206ENST00000564054 RPS26P11Q5JNZ5 115 aaPredicted RBP7.39□□□□□ -1.23
SH3GL3-206ENST00000564054 SPOCD1Q6ZMY3 1216 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms