RNA–Protein interactions for RNA: ENST00000563917.2

CLN6-203, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-203ENST00000563917 AGTPBP1Q9UPW5 1226 aa11.68□□□□□ -0.54
CLN6-203ENST00000563917 KIAA0100Q14667 2235 aaKnown RBP11.68□□□□□ -0.54
CLN6-203ENST00000563917 COL2A1P02458 1487 aaPredicted RBP11.68□□□□□ -0.54
CLN6-203ENST00000563917 USP17L5A8MUK1 530 aa11.67□□□□□ -0.54
CLN6-203ENST00000563917 TNPO2O14787 897 aaKnown RBP11.67□□□□□ -0.54
CLN6-203ENST00000563917 MOGSQ13724 837 aa11.67□□□□□ -0.54
CLN6-203ENST00000563917 PROCA1Q8NCQ7 364 aaPredicted RBP11.67□□□□□ -0.54
CLN6-203ENST00000563917 ZNF280CQ8ND82 737 aa11.67□□□□□ -0.54
CLN6-203ENST00000563917 SLAIN1Q8ND83 568 aa11.67□□□□□ -0.54
CLN6-203ENST00000563917 SH3RF3Q8TEJ3 882 aaPredicted RBP11.67□□□□□ -0.54
CLN6-203ENST00000563917 COA7Q96BR5 231 aa11.67□□□□□ -0.54
CLN6-203ENST00000563917 CHMP4BQ9H444 224 aaKnown RBP11.67□□□□□ -0.54
CLN6-203ENST00000563917 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.67□□□□□ -0.54
CLN6-203ENST00000563917 RBBP6Q7Z6E9 1792 aaKnown RBP11.67□□□□□ -0.54
CLN6-203ENST00000563917 ADGRA2Q96PE1 1338 aa11.66□□□□□ -0.54
CLN6-203ENST00000563917 DOCK1Q14185 1865 aa11.66□□□□□ -0.54
CLN6-203ENST00000563917 FAM196BA6NMK8 535 aa11.66□□□□□ -0.54
CLN6-203ENST00000563917 ZBTB7BO15156 539 aaPredicted RBP11.66□□□□□ -0.54
CLN6-203ENST00000563917 IDH1O75874 414 aaKnown RBP11.66□□□□□ -0.54
CLN6-203ENST00000563917 ASNSP08243 561 aa11.66□□□□□ -0.54
CLN6-203ENST00000563917 BCRP11274 1271 aa11.66□□□□□ -0.54
CLN6-203ENST00000563917 CAP2P40123 477 aa11.66□□□□□ -0.54
CLN6-203ENST00000563917 PPP4CP60510 307 aa11.66□□□□□ -0.54
CLN6-203ENST00000563917 SPP2Q13103 211 aa11.66□□□□□ -0.54
CLN6-203ENST00000563917 FOXP4Q8IVH2 680 aaPredicted RBP11.66□□□□□ -0.54
CLN6-203ENST00000563917 ZNF384Q8TF68 577 aa11.66□□□□□ -0.54
CLN6-203ENST00000563917 TGFBRAP1Q8WUH2 860 aa11.66□□□□□ -0.54
CLN6-203ENST00000563917 ZNF512BQ96KM6 892 aaPredicted RBP11.66□□□□□ -0.54
CLN6-203ENST00000563917 CCDC8Q9H0W5 538 aaPredicted RBP11.66□□□□□ -0.54
CLN6-203ENST00000563917 GINM1Q9NU53 330 aa11.66□□□□□ -0.54
CLN6-203ENST00000563917 TMOD4Q9NZQ9 345 aa11.66□□□□□ -0.54
CLN6-203ENST00000563917 TAOK2Q9UL54 1235 aa11.66□□□□□ -0.54
CLN6-203ENST00000563917 NOP58Q9Y2X3 529 aaKnown RBP11.66□□□□□ -0.54
CLN6-203ENST00000563917 TNRC18O15417 2968 aaPredicted RBP11.66□□□□□ -0.54
CLN6-203ENST00000563917 ZBED9Q6R2W3 1325 aa11.65□□□□□ -0.54
CLN6-203ENST00000563917 CYP2E1P05181 493 aaPredicted RBP11.65□□□□□ -0.54
CLN6-203ENST00000563917 CYP7A1P22680 504 aa11.65□□□□□ -0.54
CLN6-203ENST00000563917 ZAP70P43403 619 aa11.65□□□□□ -0.54
CLN6-203ENST00000563917 GCLCP48506 637 aaPredicted RBP11.65□□□□□ -0.54
CLN6-203ENST00000563917 PRKCZQ05513 592 aa11.65□□□□□ -0.54
CLN6-203ENST00000563917 MAP3K12Q12852 859 aa11.65□□□□□ -0.54
CLN6-203ENST00000563917 TMED8Q6PL24 325 aaPredicted RBP11.65□□□□□ -0.54
CLN6-203ENST00000563917 MAPKAPK5Q8IW41 473 aa11.65□□□□□ -0.54
CLN6-203ENST00000563917 ANKRD13CQ8N6S4 541 aa11.65□□□□□ -0.54
CLN6-203ENST00000563917 RNF208Q9H0X6 261 aa11.65□□□□□ -0.54
CLN6-203ENST00000563917 ADCY3O60266 1144 aa11.64□□□□□ -0.55
CLN6-203ENST00000563917 HMMRO75330 724 aa11.64□□□□□ -0.55
CLN6-203ENST00000563917 CCL5P13501 91 aa11.64□□□□□ -0.55
CLN6-203ENST00000563917 USP5P45974 858 aa11.64□□□□□ -0.55
CLN6-203ENST00000563917 HMGCS2P54868 508 aa11.64□□□□□ -0.55
CLN6-203ENST00000563917 IRX3P78415 501 aaPredicted RBP11.64□□□□□ -0.55
CLN6-203ENST00000563917 FAM110CQ1W6H9 321 aa11.64□□□□□ -0.55
CLN6-203ENST00000563917 CCDC84Q86UT8 332 aaPredicted RBP11.64□□□□□ -0.55
CLN6-203ENST00000563917 AACSQ86V21 672 aa11.64□□□□□ -0.55
CLN6-203ENST00000563917 CCAR1Q8IX12 1150 aaKnown RBP11.64□□□□□ -0.55
CLN6-203ENST00000563917 PCDH10Q9P2E7 1040 aa11.64□□□□□ -0.55
CLN6-203ENST00000563917 DBNLQ9UJU6 430 aaKnown RBP11.64□□□□□ -0.55
CLN6-203ENST00000563917 FLT1P17948 1338 aa11.63□□□□□ -0.55
CLN6-203ENST00000563917 C19orf81C9J6K1 198 aa11.63□□□□□ -0.55
CLN6-203ENST00000563917 GJB1P08034 283 aa11.63□□□□□ -0.55
CLN6-203ENST00000563917 SLURP2P0DP57 97 aa11.63□□□□□ -0.55
CLN6-203ENST00000563917 RLBP1P12271 317 aa11.63□□□□□ -0.55
CLN6-203ENST00000563917 CAPN2P17655 700 aa11.63□□□□□ -0.55
CLN6-203ENST00000563917 CTGFP29279 349 aa11.63□□□□□ -0.55
CLN6-203ENST00000563917 FLT3LGP49771 235 aa11.63□□□□□ -0.55
CLN6-203ENST00000563917 TTF1Q15361 905 aaPredicted RBP11.63□□□□□ -0.55
CLN6-203ENST00000563917 MTFR1Q15390 333 aa11.63□□□□□ -0.55
CLN6-203ENST00000563917 CEP85Q6P2H3 762 aa11.63□□□□□ -0.55
CLN6-203ENST00000563917 CLASRPQ8N2M8 674 aaKnown RBP11.63□□□□□ -0.55
CLN6-203ENST00000563917 PXYLP1Q8TE99 480 aa11.63□□□□□ -0.55
CLN6-203ENST00000563917 DPF3Q92784 378 aa11.63□□□□□ -0.55
CLN6-203ENST00000563917 EAF2Q96CJ1 260 aaPredicted RBP11.63□□□□□ -0.55
CLN6-203ENST00000563917 HTATIP2Q9BUP3 242 aa11.63□□□□□ -0.55
CLN6-203ENST00000563917 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.63□□□□□ -0.55
CLN6-203ENST00000563917 EXOC6BQ9Y2D4 811 aa11.63□□□□□ -0.55
CLN6-203ENST00000563917 ZSWIM8A7E2V4 1837 aa11.63□□□□□ -0.55
CLN6-203ENST00000563917 MAST2Q6P0Q8 1798 aa11.62□□□□□ -0.55
CLN6-203ENST00000563917 USP17L10C9JJH3 530 aa11.62□□□□□ -0.55
CLN6-203ENST00000563917 IRF5Q13568 498 aa11.62□□□□□ -0.55
CLN6-203ENST00000563917 MTMR2Q13614 643 aa11.62□□□□□ -0.55
CLN6-203ENST00000563917 SH3D19Q5HYK7 790 aa11.62□□□□□ -0.55
CLN6-203ENST00000563917 TREML2Q5T2D2 321 aa11.62□□□□□ -0.55
CLN6-203ENST00000563917 TTC6Q86TZ1 520 aa11.62□□□□□ -0.55
CLN6-203ENST00000563917 MAGEB6Q8N7X4 407 aa11.62□□□□□ -0.55
CLN6-203ENST00000563917 PANK1Q8TE04 598 aa11.62□□□□□ -0.55
CLN6-203ENST00000563917 WDR18Q9BV38 432 aa11.62□□□□□ -0.55
CLN6-203ENST00000563917 BCL11AQ9H165 835 aa11.62□□□□□ -0.55
CLN6-203ENST00000563917 CWC22Q9HCG8 908 aaKnown RBP11.62□□□□□ -0.55
CLN6-203ENST00000563917 PIH1D3Q9NQM4 214 aaKnown RBP11.62□□□□□ -0.55
CLN6-203ENST00000563917 SAP30BPQ9UHR5 308 aaKnown RBP11.62□□□□□ -0.55
CLN6-203ENST00000563917 PALD1Q9ULE6 856 aa11.62□□□□□ -0.55
CLN6-203ENST00000563917 DDX19BQ9UMR2 479 aa11.62□□□□□ -0.55
CLN6-203ENST00000563917 GABRQQ9UN88 632 aa11.62□□□□□ -0.55
CLN6-203ENST00000563917 GDF11O95390 407 aa11.61□□□□□ -0.55
CLN6-203ENST00000563917 TFRCP02786 760 aaKnown RBP11.61□□□□□ -0.55
CLN6-203ENST00000563917 IFIT2P09913 472 aaKnown RBP11.61□□□□□ -0.55
CLN6-203ENST00000563917 GJA8P48165 433 aa11.61□□□□□ -0.55
CLN6-203ENST00000563917 BACE1P56817 501 aa11.61□□□□□ -0.55
CLN6-203ENST00000563917 RPAP2Q8IXW5 612 aaPredicted RBP11.61□□□□□ -0.55
CLN6-203ENST00000563917 MIGA1Q8NAN2 632 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms