RNA–Protein interactions for RNA: ENST00000563672.5

CMTM3-206, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 4

Gene CMTM3, Length 460 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-206ENST00000563672 FAM196BA6NMK8 535 aa24.5■■□□□ 1.51
CMTM3-206ENST00000563672 IRF6O14896 467 aa24.5■■□□□ 1.51
CMTM3-206ENST00000563672 CTNND1O60716 968 aaKnown RBP24.5■■□□□ 1.51
CMTM3-206ENST00000563672 PDE1AP54750 535 aa24.5■■□□□ 1.51
CMTM3-206ENST00000563672 NUCB1Q02818 461 aa24.5■■□□□ 1.51
CMTM3-206ENST00000563672 IFNL1Q8IU54 200 aa24.5■■□□□ 1.51
CMTM3-206ENST00000563672 SCYL3Q8IZE3 742 aa24.5■■□□□ 1.51
CMTM3-206ENST00000563672 SAP30BPQ9UHR5 308 aaKnown RBP24.5■■□□□ 1.51
CMTM3-206ENST00000563672 IGF2BP3O00425 579 aaKnown RBP eCLIP24.49■■□□□ 1.51
CMTM3-206ENST00000563672 GTF2A2P52657 109 aa24.49■■□□□ 1.51
CMTM3-206ENST00000563672 CHD1LQ86WJ1 897 aa24.49■■□□□ 1.51
CMTM3-206ENST00000563672 PTPN18Q99952 460 aa24.49■■□□□ 1.51
CMTM3-206ENST00000563672 ARMT1Q9H993 441 aa24.49■■□□□ 1.51
CMTM3-206ENST00000563672 ALDH1A1P00352 501 aa24.48■■□□□ 1.51
CMTM3-206ENST00000563672 FOCADQ5VW36 1801 aa24.48■■□□□ 1.51
CMTM3-206ENST00000563672 BRI3BPQ8WY22 251 aa24.48■■□□□ 1.51
CMTM3-206ENST00000563672 CDK5RAP2Q96SN8 1893 aa24.48■■□□□ 1.51
CMTM3-206ENST00000563672 CFHR5Q9BXR6 569 aa24.48■■□□□ 1.51
CMTM3-206ENST00000563672 PUS7LQ9H0K6 701 aaKnown RBP24.48■■□□□ 1.51
CMTM3-206ENST00000563672 RNF113AO15541 343 aaKnown RBP24.47■■□□□ 1.51
CMTM3-206ENST00000563672 MBD4O95243 580 aa24.47■■□□□ 1.51
CMTM3-206ENST00000563672 HLA-DOAP06340 250 aa24.47■■□□□ 1.51
CMTM3-206ENST00000563672 RRP1BQ14684 758 aaKnown RBP24.47■■□□□ 1.51
CMTM3-206ENST00000563672 DNAJC18Q9H819 358 aa24.47■■□□□ 1.51
CMTM3-206ENST00000563672 KCNH4Q9UQ05 1017 aa24.47■■□□□ 1.51
CMTM3-206ENST00000563672 LAMB1P07942 1786 aa24.47■■□□□ 1.51
CMTM3-206ENST00000563672 CCL15-CCL14A0A0B4J2E2 113 aa24.46■■□□□ 1.51
CMTM3-206ENST00000563672 ZFYP08048 801 aaPredicted RBP24.46■■□□□ 1.51
CMTM3-206ENST00000563672 PTPRAP18433 802 aa24.46■■□□□ 1.51
CMTM3-206ENST00000563672 SNAPC2Q13487 334 aa24.46■■□□□ 1.51
CMTM3-206ENST00000563672 CCL15Q16663 113 aa24.46■■□□□ 1.51
CMTM3-206ENST00000563672 SDR42E1Q8WUS8 393 aa24.46■■□□□ 1.51
CMTM3-206ENST00000563672 PICK1Q9NRD5 415 aa24.46■■□□□ 1.51
CMTM3-206ENST00000563672 PRKAB2O43741 272 aa24.45■■□□□ 1.5
CMTM3-206ENST00000563672 TBC1D8O95759 1140 aa24.45■■□□□ 1.5
CMTM3-206ENST00000563672 CETPP11597 493 aa24.45■■□□□ 1.5
CMTM3-206ENST00000563672 CAP2P40123 477 aa24.45■■□□□ 1.5
CMTM3-206ENST00000563672 TTC6Q86TZ1 520 aa24.45■■□□□ 1.5
CMTM3-206ENST00000563672 APPBP2Q92624 585 aa24.45■■□□□ 1.5
CMTM3-206ENST00000563672 EHD4Q9H223 541 aa24.45■■□□□ 1.5
CMTM3-206ENST00000563672 DCP1AQ9NPI6 582 aaPredicted RBP24.45■■□□□ 1.5
CMTM3-206ENST00000563672 ZHX2Q9Y6X8 837 aa24.45■■□□□ 1.5
CMTM3-206ENST00000563672 SLC4A8Q2Y0W8 1093 aa24.44■■□□□ 1.5
CMTM3-206ENST00000563672 LRRFIP1Q32MZ4 808 aaKnown RBP24.44■■□□□ 1.5
CMTM3-206ENST00000563672 OTUD7BQ6GQQ9 843 aa24.44■■□□□ 1.5
CMTM3-206ENST00000563672 CRACR2BQ8N4Y2 399 aaPredicted RBP24.44■■□□□ 1.5
CMTM3-206ENST00000563672 OSBP2Q969R2 916 aa24.44■■□□□ 1.5
CMTM3-206ENST00000563672 SIPA1L1O43166 1804 aa24.44■■□□□ 1.5
CMTM3-206ENST00000563672 CXCL11O14625 94 aa24.43■■□□□ 1.5
CMTM3-206ENST00000563672 PLCD1P51178 756 aa24.43■■□□□ 1.5
CMTM3-206ENST00000563672 PLEKHM2Q8IWE5 1019 aa24.43■■□□□ 1.5
CMTM3-206ENST00000563672 STRBPQ96SI9 672 aaKnown RBP24.43■■□□□ 1.5
CMTM3-206ENST00000563672 R3HDMLQ9H3Y0 253 aa24.43■■□□□ 1.5
CMTM3-206ENST00000563672 ATP8A2Q9NTI2 1148 aa24.43■■□□□ 1.5
CMTM3-206ENST00000563672 MCM9Q9NXL9 1143 aa24.43■■□□□ 1.5
CMTM3-206ENST00000563672 AFG3L2Q9Y4W6 797 aa24.43■■□□□ 1.5
CMTM3-206ENST00000563672 NOM1Q5C9Z4 860 aaKnown RBP24.42■■□□□ 1.5
CMTM3-206ENST00000563672 FSD1Q9BTV5 496 aa24.42■■□□□ 1.5
CMTM3-206ENST00000563672 TRIM34Q9BYJ4 488 aa24.42■■□□□ 1.5
CMTM3-206ENST00000563672 OSBPL3Q9H4L5 887 aa24.42■■□□□ 1.5
CMTM3-206ENST00000563672 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.42■■□□□ 1.5
CMTM3-206ENST00000563672 SERPINB13Q9UIV8 391 aa24.42■■□□□ 1.5
CMTM3-206ENST00000563672 POLR3DP05423 398 aaPredicted RBP24.41■■□□□ 1.5
CMTM3-206ENST00000563672 MOGSQ13724 837 aa24.41■■□□□ 1.5
CMTM3-206ENST00000563672 TATDN1Q6P1N9 297 aa24.41■■□□□ 1.5
CMTM3-206ENST00000563672 EVI5LQ96CN4 794 aa24.41■■□□□ 1.5
CMTM3-206ENST00000563672 MYH7P12883 1935 aa24.41■■□□□ 1.5
CMTM3-206ENST00000563672 BTBD19C9JJ37 291 aa24.4■■□□□ 1.5
CMTM3-206ENST00000563672 JAG1P78504 1218 aa24.4■■□□□ 1.5
CMTM3-206ENST00000563672 GABPAQ06546 454 aa24.4■■□□□ 1.5
CMTM3-206ENST00000563672 CCDC84Q86UT8 332 aaPredicted RBP24.4■■□□□ 1.5
CMTM3-206ENST00000563672 FAM43AQ8N2R8 423 aa24.4■■□□□ 1.5
CMTM3-206ENST00000563672 SLC4A4Q9Y6R1 1079 aa24.4■■□□□ 1.5
CMTM3-206ENST00000563672 MYH1P12882 1939 aa24.39■■□□□ 1.5
CMTM3-206ENST00000563672 DDX60LQ5H9U9 1706 aaKnown RBP24.39■■□□□ 1.5
CMTM3-206ENST00000563672 ZMYM1Q5SVZ6 1142 aa24.39■■□□□ 1.49
CMTM3-206ENST00000563672 ZCCHC17Q9NP64 241 aaKnown RBP24.39■■□□□ 1.49
CMTM3-206ENST00000563672 GINM1Q9NU53 330 aa24.39■■□□□ 1.49
CMTM3-206ENST00000563672 A0A0G2JLL6 359 aaPredicted RBP24.38■■□□□ 1.49
CMTM3-206ENST00000563672 M0R2C6 588 aa24.38■■□□□ 1.49
CMTM3-206ENST00000563672 GPR25O00155 361 aa24.38■■□□□ 1.49
CMTM3-206ENST00000563672 CYP2D6P10635 497 aa24.38■■□□□ 1.49
CMTM3-206ENST00000563672 EVX2Q03828 476 aa24.38■■□□□ 1.49
CMTM3-206ENST00000563672 PRRT2Q7Z6L0 340 aaPredicted RBP24.38■■□□□ 1.49
CMTM3-206ENST00000563672 TBC1D2Q9BYX2 928 aa24.38■■□□□ 1.49
CMTM3-206ENST00000563672 DOCK1Q14185 1865 aa24.38■■□□□ 1.49
CMTM3-206ENST00000563672 USP17L5A8MUK1 530 aa24.37■■□□□ 1.49
CMTM3-206ENST00000563672 GSG1L2A8MUP6 293 aa24.37■■□□□ 1.49
CMTM3-206ENST00000563672 GPAA1O43292 621 aa24.37■■□□□ 1.49
CMTM3-206ENST00000563672 ASNSP08243 561 aa24.37■■□□□ 1.49
CMTM3-206ENST00000563672 CRHR2Q13324 411 aa24.37■■□□□ 1.49
CMTM3-206ENST00000563672 ANKRD23Q86SG2 305 aa24.37■■□□□ 1.49
CMTM3-206ENST00000563672 TICAM2Q86XR7 235 aa24.37■■□□□ 1.49
CMTM3-206ENST00000563672 ZNF296Q8WUU4 475 aaPredicted RBP24.37■■□□□ 1.49
CMTM3-206ENST00000563672 TAOK2Q9UL54 1235 aa24.37■■□□□ 1.49
CMTM3-206ENST00000563672 USP17L12C9JPN9 530 aa24.36■■□□□ 1.49
CMTM3-206ENST00000563672 USP17L21D6R901 530 aa24.36■■□□□ 1.49
CMTM3-206ENST00000563672 GDF11O95390 407 aa24.36■■□□□ 1.49
CMTM3-206ENST00000563672 SHMT1P34896 483 aa24.36■■□□□ 1.49
CMTM3-206ENST00000563672 SHROOM1Q2M3G4 852 aaPredicted RBP24.36■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms