RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 HEXIM2Q96MH2 286 aaKnown RBP6.17□□□□□ -1.42
HMGB1P33-201ENST00000563485 PRDM10Q9NQV6 1147 aa6.17□□□□□ -1.42
HMGB1P33-201ENST00000563485 PARP2Q9UGN5 583 aa6.17□□□□□ -1.42
HMGB1P33-201ENST00000563485 PCDHB5Q9Y5E4 795 aa6.17□□□□□ -1.42
HMGB1P33-201ENST00000563485 CEACAM5P06731 702 aa6.16□□□□□ -1.42
HMGB1P33-201ENST00000563485 ITIH2P19823 946 aa6.16□□□□□ -1.42
HMGB1P33-201ENST00000563485 CD96P40200 585 aa6.16□□□□□ -1.42
HMGB1P33-201ENST00000563485 SEPT6Q14141 434 aa6.16□□□□□ -1.42
HMGB1P33-201ENST00000563485 WIPI1Q5MNZ9 446 aaPredicted RBP6.16□□□□□ -1.42
HMGB1P33-201ENST00000563485 ARMCX6Q7L4S7 300 aa6.16□□□□□ -1.42
HMGB1P33-201ENST00000563485 CYFIP1Q7L576 1253 aa6.16□□□□□ -1.42
HMGB1P33-201ENST00000563485 FAM214BQ7L5A3 538 aa6.16□□□□□ -1.42
HMGB1P33-201ENST00000563485 STK11IPQ8N1F8 1099 aa6.16□□□□□ -1.42
HMGB1P33-201ENST00000563485 MISP3Q96FF7 219 aa6.16□□□□□ -1.42
HMGB1P33-201ENST00000563485 FBRSQ9HAH7 460 aa6.16□□□□□ -1.42
HMGB1P33-201ENST00000563485 MKNK2Q9HBH9 465 aa6.16□□□□□ -1.42
HMGB1P33-201ENST00000563485 PLAGL2Q9UPG8 496 aa6.16□□□□□ -1.42
HMGB1P33-201ENST00000563485 CD8BP10966 210 aa6.15□□□□□ -1.42
HMGB1P33-201ENST00000563485 LIG3P49916 1009 aa6.15□□□□□ -1.42
HMGB1P33-201ENST00000563485 DAB2P98082 770 aa6.15□□□□□ -1.42
HMGB1P33-201ENST00000563485 PSMD2Q13200 908 aa6.15□□□□□ -1.42
HMGB1P33-201ENST00000563485 IFI16Q16666 785 aaKnown RBP6.15□□□□□ -1.42
HMGB1P33-201ENST00000563485 HDXQ7Z353 690 aa6.15□□□□□ -1.42
HMGB1P33-201ENST00000563485 FBXO33Q7Z6M2 555 aa6.15□□□□□ -1.42
HMGB1P33-201ENST00000563485 KCT2Q8NC54 265 aa6.15□□□□□ -1.42
HMGB1P33-201ENST00000563485 ZNF507Q8TCN5 953 aa6.15□□□□□ -1.42
HMGB1P33-201ENST00000563485 FAM161BQ96MY7 647 aa6.15□□□□□ -1.42
HMGB1P33-201ENST00000563485 KRTAP4-12Q9BQ66 201 aa6.15□□□□□ -1.42
HMGB1P33-201ENST00000563485 EOMESO95936 686 aa6.14□□□□□ -1.43
HMGB1P33-201ENST00000563485 LMNB1P20700 586 aa6.14□□□□□ -1.43
HMGB1P33-201ENST00000563485 RPS26P62854 115 aaKnown RBP6.14□□□□□ -1.43
HMGB1P33-201ENST00000563485 TAGLNQ01995 201 aaKnown RBP6.14□□□□□ -1.43
HMGB1P33-201ENST00000563485 PRKCQQ04759 706 aa6.14□□□□□ -1.43
HMGB1P33-201ENST00000563485 SLBPQ14493 270 aaKnown RBP eCLIP6.14□□□□□ -1.43
HMGB1P33-201ENST00000563485 PLCL1Q15111 1095 aa6.14□□□□□ -1.43
HMGB1P33-201ENST00000563485 AOC3Q16853 763 aa6.14□□□□□ -1.43
HMGB1P33-201ENST00000563485 AGMOQ6ZNB7 445 aa6.14□□□□□ -1.43
HMGB1P33-201ENST00000563485 FMNL2Q96PY5 1086 aa6.14□□□□□ -1.43
HMGB1P33-201ENST00000563485 WNT10AQ9GZT5 417 aa6.14□□□□□ -1.43
HMGB1P33-201ENST00000563485 VAV3Q9UKW4 847 aa6.14□□□□□ -1.43
HMGB1P33-201ENST00000563485 SNCAIPQ9Y6H5 919 aa6.14□□□□□ -1.43
HMGB1P33-201ENST00000563485 TMEM265A0A087WTH1 108 aa6.13□□□□□ -1.43
HMGB1P33-201ENST00000563485 LRIG2O94898 1065 aa6.13□□□□□ -1.43
HMGB1P33-201ENST00000563485 CTSHP09668 335 aa6.13□□□□□ -1.43
HMGB1P33-201ENST00000563485 TFE3P19532 575 aaPredicted RBP6.13□□□□□ -1.43
HMGB1P33-201ENST00000563485 NKG7Q16617 165 aa6.13□□□□□ -1.43
HMGB1P33-201ENST00000563485 HRASLS5Q96KN8 279 aa6.13□□□□□ -1.43
HMGB1P33-201ENST00000563485 TNKS2Q9H2K2 1166 aa6.13□□□□□ -1.43
HMGB1P33-201ENST00000563485 GTF2IRD1Q9UHL9 959 aa6.13□□□□□ -1.43
HMGB1P33-201ENST00000563485 RNF114Q9Y508 228 aa6.13□□□□□ -1.43
HMGB1P33-201ENST00000563485 IGF2BP3O00425 579 aaKnown RBP eCLIP6.12□□□□□ -1.43
HMGB1P33-201ENST00000563485 SLITRK5O94991 958 aa6.12□□□□□ -1.43
HMGB1P33-201ENST00000563485 ITGB5P18084 799 aa6.12□□□□□ -1.43
HMGB1P33-201ENST00000563485 ETF1P62495 437 aaKnown RBP6.12□□□□□ -1.43
HMGB1P33-201ENST00000563485 XPCQ01831 940 aaPredicted RBP6.12□□□□□ -1.43
HMGB1P33-201ENST00000563485 ZNF792Q3KQV3 632 aa6.12□□□□□ -1.43
HMGB1P33-201ENST00000563485 TMC4Q7Z404 712 aa6.12□□□□□ -1.43
HMGB1P33-201ENST00000563485 SPACA3Q8IXA5 215 aa6.12□□□□□ -1.43
HMGB1P33-201ENST00000563485 FOXQ1Q9C009 403 aa6.12□□□□□ -1.43
HMGB1P33-201ENST00000563485 ADAMTS6Q9UKP5 1117 aa6.12□□□□□ -1.43
HMGB1P33-201ENST00000563485 TLR6Q9Y2C9 796 aa6.12□□□□□ -1.43
HMGB1P33-201ENST00000563485 GFRA2O00451 464 aa6.11□□□□□ -1.43
HMGB1P33-201ENST00000563485 FUT4P22083 530 aa6.11□□□□□ -1.43
HMGB1P33-201ENST00000563485 GRK4P32298 578 aa6.11□□□□□ -1.43
HMGB1P33-201ENST00000563485 TAF1CQ15572 869 aaPredicted RBP6.11□□□□□ -1.43
HMGB1P33-201ENST00000563485 NKPD1Q17RQ9 610 aa6.11□□□□□ -1.43
HMGB1P33-201ENST00000563485 HID1Q8IV36 788 aa6.11□□□□□ -1.43
HMGB1P33-201ENST00000563485 MIPEPQ99797 713 aa6.11□□□□□ -1.43
HMGB1P33-201ENST00000563485 GZF1Q9H116 711 aaPredicted RBP6.11□□□□□ -1.43
HMGB1P33-201ENST00000563485 MIR1-1HGQ9H1L0 117 aa6.11□□□□□ -1.43
HMGB1P33-201ENST00000563485 PRDM5Q9NQX1 630 aaPredicted RBP6.11□□□□□ -1.43
HMGB1P33-201ENST00000563485 CNTNAP4Q9C0A0 1308 aa6.1□□□□□ -1.43
HMGB1P33-201ENST00000563485 GNAT3A8MTJ3 354 aa6.1□□□□□ -1.43
HMGB1P33-201ENST00000563485 F6X3S4 739 aa6.1□□□□□ -1.43
HMGB1P33-201ENST00000563485 RBAK-RBAKDNI3L0D1 243 aa6.1□□□□□ -1.43
HMGB1P33-201ENST00000563485 CAP2P40123 477 aa6.1□□□□□ -1.43
HMGB1P33-201ENST00000563485 ST13P50502 369 aaKnown RBP6.1□□□□□ -1.43
HMGB1P33-201ENST00000563485 CCDC27Q2M243 656 aa6.1□□□□□ -1.43
HMGB1P33-201ENST00000563485 PRAMEF13Q5VWM6 474 aa6.1□□□□□ -1.43
HMGB1P33-201ENST00000563485 KRTAP19-1Q8IUB9 90 aa6.1□□□□□ -1.43
HMGB1P33-201ENST00000563485 NOC4LQ9BVI4 516 aaKnown RBP6.1□□□□□ -1.43
HMGB1P33-201ENST00000563485 MBNL3Q9NUK0 354 aaKnown RBP6.1□□□□□ -1.43
HMGB1P33-201ENST00000563485 MAPK8IP1Q9UQF2 711 aa6.1□□□□□ -1.43
HMGB1P33-201ENST00000563485 USP31Q70CQ4 1352 aa6.09□□□□□ -1.43
HMGB1P33-201ENST00000563485 PRR33A8MZF0 331 aa6.09□□□□□ -1.43
HMGB1P33-201ENST00000563485 PAPLNO95428 1278 aa6.09□□□□□ -1.43
HMGB1P33-201ENST00000563485 RNASE1P07998 156 aaKnown RBP6.09□□□□□ -1.43
HMGB1P33-201ENST00000563485 TXKP42681 527 aa6.09□□□□□ -1.43
HMGB1P33-201ENST00000563485 MFSD2AQ8NA29 543 aa6.09□□□□□ -1.43
HMGB1P33-201ENST00000563485 PHC3Q8NDX5 983 aa6.09□□□□□ -1.43
HMGB1P33-201ENST00000563485 RIN3Q8TB24 985 aa6.09□□□□□ -1.43
HMGB1P33-201ENST00000563485 PI4K2BQ8TCG2 481 aa6.09□□□□□ -1.43
HMGB1P33-201ENST00000563485 XAGE3Q8WTP9 111 aa6.09□□□□□ -1.43
HMGB1P33-201ENST00000563485 JARID2Q92833 1246 aaPredicted RBP6.09□□□□□ -1.43
HMGB1P33-201ENST00000563485 RC3H2Q9HBD1 1191 aaKnown RBP6.09□□□□□ -1.43
HMGB1P33-201ENST00000563485 GOLGA2P5Q9HBQ8 144 aa6.09□□□□□ -1.43
HMGB1P33-201ENST00000563485 TPX2Q9ULW0 747 aaKnown RBP6.09□□□□□ -1.43
HMGB1P33-201ENST00000563485 SNX11Q9Y5W9 270 aa6.09□□□□□ -1.43
HMGB1P33-201ENST00000563485 SORBS3O60504 671 aa6.08□□□□□ -1.44
HMGB1P33-201ENST00000563485 CST3P01034 146 aaPredicted RBP6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms