RNA–Protein interactions for RNA: ENST00000563273.5

NSMCE1-204, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-204ENST00000563273 OTOP1Q7RTM1 612 aa14.85□□□□□ -0.03
NSMCE1-204ENST00000563273 DOCK2Q92608 1830 aa14.85□□□□□ -0.03
NSMCE1-204ENST00000563273 GPAT2Q6NUI2 795 aa14.84□□□□□ -0.03
NSMCE1-204ENST00000563273 NDUFB9Q9Y6M9 179 aa14.84□□□□□ -0.03
NSMCE1-204ENST00000563273 ADGRA2Q96PE1 1338 aa14.84□□□□□ -0.03
NSMCE1-204ENST00000563273 PDHXO00330 501 aa14.83□□□□□ -0.04
NSMCE1-204ENST00000563273 GNRH1P01148 92 aa14.83□□□□□ -0.04
NSMCE1-204ENST00000563273 HLA-DOAP06340 250 aa14.83□□□□□ -0.04
NSMCE1-204ENST00000563273 SLURP2P0DP57 97 aa14.83□□□□□ -0.04
NSMCE1-204ENST00000563273 PDE6AP16499 860 aa14.83□□□□□ -0.04
NSMCE1-204ENST00000563273 DYNLL1P63167 89 aaKnown RBP14.83□□□□□ -0.04
NSMCE1-204ENST00000563273 C17orf99Q6UX52 265 aa14.83□□□□□ -0.04
NSMCE1-204ENST00000563273 MAPKAPK5Q8IW41 473 aa14.83□□□□□ -0.04
NSMCE1-204ENST00000563273 CD99L2Q8TCZ2 262 aa14.83□□□□□ -0.04
NSMCE1-204ENST00000563273 PARK7Q99497 189 aaKnown RBP14.83□□□□□ -0.04
NSMCE1-204ENST00000563273 HAUS7Q99871 368 aa14.83□□□□□ -0.04
NSMCE1-204ENST00000563273 RIOK1Q9BRS2 568 aaKnown RBP14.83□□□□□ -0.04
NSMCE1-204ENST00000563273 EHD4Q9H223 541 aa14.83□□□□□ -0.04
NSMCE1-204ENST00000563273 EFCC1Q9HA90 598 aa14.83□□□□□ -0.04
NSMCE1-204ENST00000563273 PAG1Q9NWQ8 432 aa14.83□□□□□ -0.04
NSMCE1-204ENST00000563273 TAOK2Q9UL54 1235 aa14.83□□□□□ -0.04
NSMCE1-204ENST00000563273 TRIM17Q9Y577 477 aa14.83□□□□□ -0.04
NSMCE1-204ENST00000563273 TCRBV5S4A2TA0A5A2 114 aa14.82□□□□□ -0.04
NSMCE1-204ENST00000563273 GOLIM4O00461 696 aa14.82□□□□□ -0.04
NSMCE1-204ENST00000563273 SLC9C2Q5TAH2 1124 aa14.82□□□□□ -0.04
NSMCE1-204ENST00000563273 MIGA1Q8NAN2 632 aa14.82□□□□□ -0.04
NSMCE1-204ENST00000563273 PROCA1Q8NCQ7 364 aaPredicted RBP14.82□□□□□ -0.04
NSMCE1-204ENST00000563273 DNAJC2Q99543 621 aaKnown RBP14.82□□□□□ -0.04
NSMCE1-204ENST00000563273 PTPN22Q9Y2R2 807 aa14.82□□□□□ -0.04
NSMCE1-204ENST00000563273 HTTP42858 3142 aa14.81□□□□□ -0.04
NSMCE1-204ENST00000563273 MAGEB6P1A0A0J9YX57 407 aa14.81□□□□□ -0.04
NSMCE1-204ENST00000563273 FAM196BA6NMK8 535 aa14.81□□□□□ -0.04
NSMCE1-204ENST00000563273 USP17L5A8MUK1 530 aa14.81□□□□□ -0.04
NSMCE1-204ENST00000563273 ASNSP08243 561 aa14.81□□□□□ -0.04
NSMCE1-204ENST00000563273 USP5P45974 858 aa14.81□□□□□ -0.04
NSMCE1-204ENST00000563273 LACTBP83111 547 aaPredicted RBP14.81□□□□□ -0.04
NSMCE1-204ENST00000563273 AAMPQ13685 434 aa14.81□□□□□ -0.04
NSMCE1-204ENST00000563273 KIF22Q14807 665 aa14.81□□□□□ -0.04
NSMCE1-204ENST00000563273 CRACR2BQ8N4Y2 399 aaPredicted RBP14.81□□□□□ -0.04
NSMCE1-204ENST00000563273 ZNF280CQ8ND82 737 aa14.81□□□□□ -0.04
NSMCE1-204ENST00000563273 WDR18Q9BV38 432 aa14.81□□□□□ -0.04
NSMCE1-204ENST00000563273 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.81□□□□□ -0.04
NSMCE1-204ENST00000563273 DNAJC18Q9H819 358 aa14.81□□□□□ -0.04
NSMCE1-204ENST00000563273 PALD1Q9ULE6 856 aa14.81□□□□□ -0.04
NSMCE1-204ENST00000563273 PRMT2P55345 433 aa14.8□□□□□ -0.04
NSMCE1-204ENST00000563273 RRP1BQ14684 758 aaKnown RBP14.8□□□□□ -0.04
NSMCE1-204ENST00000563273 SH3D19Q5HYK7 790 aa14.8□□□□□ -0.04
NSMCE1-204ENST00000563273 TTC6Q86TZ1 520 aa14.8□□□□□ -0.04
NSMCE1-204ENST00000563273 GPATCH3Q96I76 525 aa14.8□□□□□ -0.04
NSMCE1-204ENST00000563273 TRIM34Q9BYJ4 488 aa14.8□□□□□ -0.04
NSMCE1-204ENST00000563273 CRNKL1Q9BZJ0 848 aaKnown RBP14.8□□□□□ -0.04
NSMCE1-204ENST00000563273 BOLA2Q9H3K6 86 aa14.8□□□□□ -0.04
NSMCE1-204ENST00000563273 AS3MTQ9HBK9 375 aa14.8□□□□□ -0.04
NSMCE1-204ENST00000563273 ECHDC1Q9NTX5 307 aa14.8□□□□□ -0.04
NSMCE1-204ENST00000563273 AGTPBP1Q9UPW5 1226 aa14.8□□□□□ -0.04
NSMCE1-204ENST00000563273 ZNF532Q9HCE3 1301 aa14.8□□□□□ -0.04
NSMCE1-204ENST00000563273 TRIM75PA6NK02 468 aa14.79□□□□□ -0.04
NSMCE1-204ENST00000563273 ADD2P35612 726 aa14.79□□□□□ -0.04
NSMCE1-204ENST00000563273 CAP1Q01518 475 aa14.79□□□□□ -0.04
NSMCE1-204ENST00000563273 UBE3CQ15386 1083 aa14.79□□□□□ -0.04
NSMCE1-204ENST00000563273 TATDN1Q6P1N9 297 aa14.79□□□□□ -0.04
NSMCE1-204ENST00000563273 ARMC5Q96C12 935 aa14.79□□□□□ -0.04
NSMCE1-204ENST00000563273 SERPINB13Q9UIV8 391 aa14.79□□□□□ -0.04
NSMCE1-204ENST00000563273 PCDHB15Q9Y5E8 787 aa14.79□□□□□ -0.04
NSMCE1-204ENST00000563273 DOCK1Q14185 1865 aa14.78□□□□□ -0.04
NSMCE1-204ENST00000563273 BCRP11274 1271 aa14.78□□□□□ -0.04
NSMCE1-204ENST00000563273 SPP2Q13103 211 aa14.78□□□□□ -0.04
NSMCE1-204ENST00000563273 ZSCAN25Q6NSZ9 544 aa14.78□□□□□ -0.04
NSMCE1-204ENST00000563273 GADL1Q6ZQY3 521 aa14.78□□□□□ -0.04
NSMCE1-204ENST00000563273 SAP30BPQ9UHR5 308 aaKnown RBP14.78□□□□□ -0.04
NSMCE1-204ENST00000563273 PNMA3Q9UL41 463 aa14.78□□□□□ -0.04
NSMCE1-204ENST00000563273 AK9Q5TCS8 1911 aa14.78□□□□□ -0.04
NSMCE1-204ENST00000563273 SMARCA5O60264 1052 aaPredicted RBP14.77□□□□□ -0.05
NSMCE1-204ENST00000563273 BACE1P56817 501 aa14.77□□□□□ -0.05
NSMCE1-204ENST00000563273 MLLT1Q03111 559 aaPredicted RBP14.77□□□□□ -0.05
NSMCE1-204ENST00000563273 GABPAQ06546 454 aa14.77□□□□□ -0.05
NSMCE1-204ENST00000563273 PABPC4Q13310 644 aaKnown RBP eCLIP14.77□□□□□ -0.05
NSMCE1-204ENST00000563273 EDC3Q96F86 508 aaKnown RBP14.77□□□□□ -0.05
NSMCE1-204ENST00000563273 ATP8A2Q9NTI2 1148 aa14.77□□□□□ -0.05
NSMCE1-204ENST00000563273 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.77□□□□□ -0.05
NSMCE1-204ENST00000563273 CPA4Q9UI42 421 aa14.77□□□□□ -0.05
NSMCE1-204ENST00000563273 ZBTB21Q9ULJ3 1066 aa14.77□□□□□ -0.05
NSMCE1-204ENST00000563273 FOCADQ5VW36 1801 aa14.76□□□□□ -0.05
NSMCE1-204ENST00000563273 TTC41PQ6P2S7 1318 aa14.76□□□□□ -0.05
NSMCE1-204ENST00000563273 C19orf81C9J6K1 198 aa14.76□□□□□ -0.05
NSMCE1-204ENST00000563273 HOXD10P28358 340 aa14.76□□□□□ -0.05
NSMCE1-204ENST00000563273 CCDC84Q86UT8 332 aaPredicted RBP14.76□□□□□ -0.05
NSMCE1-204ENST00000563273 DCP1AQ9NPI6 582 aaPredicted RBP14.76□□□□□ -0.05
NSMCE1-204ENST00000563273 SIPA1L1O43166 1804 aa14.76□□□□□ -0.05
NSMCE1-204ENST00000563273 CYP2C8P10632 490 aa14.75□□□□□ -0.05
NSMCE1-204ENST00000563273 GCLCP48506 637 aaPredicted RBP14.75□□□□□ -0.05
NSMCE1-204ENST00000563273 JAG1P78504 1218 aa14.75□□□□□ -0.05
NSMCE1-204ENST00000563273 HDAC1Q13547 482 aaPredicted RBP14.75□□□□□ -0.05
NSMCE1-204ENST00000563273 LCORLQ8N3X6 602 aa14.75□□□□□ -0.05
NSMCE1-204ENST00000563273 KBTBD3Q8NAB2 608 aa14.75□□□□□ -0.05
NSMCE1-204ENST00000563273 YTHDC1Q96MU7 727 aaKnown RBP14.75□□□□□ -0.05
NSMCE1-204ENST00000563273 CRBNQ96SW2 442 aa14.75□□□□□ -0.05
NSMCE1-204ENST00000563273 USP17L10C9JJH3 530 aa14.74□□□□□ -0.05
NSMCE1-204ENST00000563273 ERC2O15083 957 aa14.74□□□□□ -0.05
NSMCE1-204ENST00000563273 MBD4O95243 580 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms