RNA–Protein interactions for RNA: ENST00000562998.1

CDH11-206, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-206ENST00000562998 COL13A1Q5TAT6 717 aaPredicted RBP22.58■■□□□ 1.21
CDH11-206ENST00000562998 ZSCAN25Q6NSZ9 544 aa22.58■■□□□ 1.21
CDH11-206ENST00000562998 CHD1LQ86WJ1 897 aa22.58■■□□□ 1.21
CDH11-206ENST00000562998 IFNL1Q8IU54 200 aa22.58■■□□□ 1.21
CDH11-206ENST00000562998 FOXP4Q8IVH2 680 aaPredicted RBP22.58■■□□□ 1.21
CDH11-206ENST00000562998 SCYL3Q8IZE3 742 aa22.58■■□□□ 1.21
CDH11-206ENST00000562998 OTUD5Q96G74 571 aa22.58■■□□□ 1.21
CDH11-206ENST00000562998 PTPN18Q99952 460 aa22.58■■□□□ 1.21
CDH11-206ENST00000562998 LNPKQ9C0E8 428 aa22.58■■□□□ 1.21
CDH11-206ENST00000562998 DNAJC18Q9H819 358 aa22.58■■□□□ 1.21
CDH11-206ENST00000562998 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.58■■□□□ 1.21
CDH11-206ENST00000562998 ZBTB47Q9UFB7 747 aaPredicted RBP22.58■■□□□ 1.21
CDH11-206ENST00000562998 DOCK1Q14185 1865 aa22.58■■□□□ 1.2
CDH11-206ENST00000562998 FAM196BA6NMK8 535 aa22.57■■□□□ 1.2
CDH11-206ENST00000562998 IGF2BP3O00425 579 aaKnown RBP eCLIP22.57■■□□□ 1.2
CDH11-206ENST00000562998 IRF6O14896 467 aa22.57■■□□□ 1.2
CDH11-206ENST00000562998 USP5P45974 858 aa22.57■■□□□ 1.2
CDH11-206ENST00000562998 RRP1BQ14684 758 aaKnown RBP22.57■■□□□ 1.2
CDH11-206ENST00000562998 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.57■■□□□ 1.2
CDH11-206ENST00000562998 GTF2A2P52657 109 aa22.56■■□□□ 1.2
CDH11-206ENST00000562998 B4GALNT3Q6L9W6 998 aa22.56■■□□□ 1.2
CDH11-206ENST00000562998 CRNKL1Q9BZJ0 848 aaKnown RBP22.56■■□□□ 1.2
CDH11-206ENST00000562998 PUS7LQ9H0K6 701 aaKnown RBP22.56■■□□□ 1.2
CDH11-206ENST00000562998 ARMT1Q9H993 441 aa22.56■■□□□ 1.2
CDH11-206ENST00000562998 SAP30BPQ9UHR5 308 aaKnown RBP22.56■■□□□ 1.2
CDH11-206ENST00000562998 KCNH4Q9UQ05 1017 aa22.56■■□□□ 1.2
CDH11-206ENST00000562998 PHIPQ8WWQ0 1821 aa22.56■■□□□ 1.2
CDH11-206ENST00000562998 MBD4O95243 580 aa22.55■■□□□ 1.2
CDH11-206ENST00000562998 ZFYP08048 801 aaPredicted RBP22.55■■□□□ 1.2
CDH11-206ENST00000562998 PTPRAP18433 802 aa22.55■■□□□ 1.2
CDH11-206ENST00000562998 BRI3BPQ8WY22 251 aa22.55■■□□□ 1.2
CDH11-206ENST00000562998 EHD4Q9H223 541 aa22.55■■□□□ 1.2
CDH11-206ENST00000562998 DCP1AQ9NPI6 582 aaPredicted RBP22.55■■□□□ 1.2
CDH11-206ENST00000562998 NAV1Q8NEY1 1877 aa22.55■■□□□ 1.2
CDH11-206ENST00000562998 RNF113AO15541 343 aaKnown RBP22.54■■□□□ 1.2
CDH11-206ENST00000562998 SDR42E1Q8WUS8 393 aa22.54■■□□□ 1.2
CDH11-206ENST00000562998 OSBP2Q969R2 916 aa22.54■■□□□ 1.2
CDH11-206ENST00000562998 OSBPL3Q9H4L5 887 aa22.54■■□□□ 1.2
CDH11-206ENST00000562998 PRKAB2O43741 272 aa22.53■■□□□ 1.2
CDH11-206ENST00000562998 ALDH1A1P00352 501 aa22.53■■□□□ 1.2
CDH11-206ENST00000562998 CAP2P40123 477 aa22.53■■□□□ 1.2
CDH11-206ENST00000562998 NOM1Q5C9Z4 860 aaKnown RBP22.53■■□□□ 1.2
CDH11-206ENST00000562998 PLEKHM2Q8IWE5 1019 aa22.53■■□□□ 1.2
CDH11-206ENST00000562998 APPBP2Q92624 585 aa22.53■■□□□ 1.2
CDH11-206ENST00000562998 ATAD5Q96QE3 1844 aa22.52■■□□□ 1.2
CDH11-206ENST00000562998 HLA-DOAP06340 250 aa22.52■■□□□ 1.2
CDH11-206ENST00000562998 PLCD1P51178 756 aa22.52■■□□□ 1.2
CDH11-206ENST00000562998 SNAPC2Q13487 334 aa22.52■■□□□ 1.2
CDH11-206ENST00000562998 MOGSQ13724 837 aa22.52■■□□□ 1.2
CDH11-206ENST00000562998 STRBPQ96SI9 672 aaKnown RBP22.52■■□□□ 1.2
CDH11-206ENST00000562998 ATP8A2Q9NTI2 1148 aa22.52■■□□□ 1.2
CDH11-206ENST00000562998 AFG3L2Q9Y4W6 797 aa22.52■■□□□ 1.2
CDH11-206ENST00000562998 CCL15-CCL14A0A0B4J2E2 113 aa22.51■■□□□ 1.19
CDH11-206ENST00000562998 CXCL11O14625 94 aa22.51■■□□□ 1.19
CDH11-206ENST00000562998 CETPP11597 493 aa22.51■■□□□ 1.19
CDH11-206ENST00000562998 JAG1P78504 1218 aa22.51■■□□□ 1.19
CDH11-206ENST00000562998 GABPAQ06546 454 aa22.51■■□□□ 1.19
CDH11-206ENST00000562998 CCL15Q16663 113 aa22.51■■□□□ 1.19
CDH11-206ENST00000562998 TATDN1Q6P1N9 297 aa22.51■■□□□ 1.19
CDH11-206ENST00000562998 TTC6Q86TZ1 520 aa22.51■■□□□ 1.19
CDH11-206ENST00000562998 R3HDMLQ9H3Y0 253 aa22.51■■□□□ 1.19
CDH11-206ENST00000562998 PICK1Q9NRD5 415 aa22.51■■□□□ 1.19
CDH11-206ENST00000562998 ZHX2Q9Y6X8 837 aa22.51■■□□□ 1.19
CDH11-206ENST00000562998 TBC1D8O95759 1140 aa22.5■■□□□ 1.19
CDH11-206ENST00000562998 TICAM2Q86XR7 235 aa22.5■■□□□ 1.19
CDH11-206ENST00000562998 EVI5LQ96CN4 794 aa22.5■■□□□ 1.19
CDH11-206ENST00000562998 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.5■■□□□ 1.19
CDH11-206ENST00000562998 SERPINB13Q9UIV8 391 aa22.5■■□□□ 1.19
CDH11-206ENST00000562998 PTPRFP10586 1907 aa22.5■■□□□ 1.19
CDH11-206ENST00000562998 CASP8AP2Q9UKL3 1982 aa22.5■■□□□ 1.19
CDH11-206ENST00000562998 EVX2Q03828 476 aa22.49■■□□□ 1.19
CDH11-206ENST00000562998 SLC4A8Q2Y0W8 1093 aa22.49■■□□□ 1.19
CDH11-206ENST00000562998 LRRFIP1Q32MZ4 808 aaKnown RBP22.49■■□□□ 1.19
CDH11-206ENST00000562998 ZMYM1Q5SVZ6 1142 aa22.49■■□□□ 1.19
CDH11-206ENST00000562998 FAM43AQ8N2R8 423 aa22.49■■□□□ 1.19
CDH11-206ENST00000562998 CRACR2BQ8N4Y2 399 aaPredicted RBP22.49■■□□□ 1.19
CDH11-206ENST00000562998 FSD1Q9BTV5 496 aa22.49■■□□□ 1.19
CDH11-206ENST00000562998 ZCCHC17Q9NP64 241 aaKnown RBP22.49■■□□□ 1.19
CDH11-206ENST00000562998 MCM9Q9NXL9 1143 aa22.49■■□□□ 1.19
CDH11-206ENST00000562998 BAZ2AQ9UIF9 1905 aaKnown RBP22.49■■□□□ 1.19
CDH11-206ENST00000562998 OTUD7BQ6GQQ9 843 aa22.48■■□□□ 1.19
CDH11-206ENST00000562998 GINM1Q9NU53 330 aa22.48■■□□□ 1.19
CDH11-206ENST00000562998 TAOK2Q9UL54 1235 aa22.48■■□□□ 1.19
CDH11-206ENST00000562998 A0A0G2JLL6 359 aaPredicted RBP22.47■■□□□ 1.19
CDH11-206ENST00000562998 GSG1L2A8MUP6 293 aa22.47■■□□□ 1.19
CDH11-206ENST00000562998 BTBD19C9JJ37 291 aa22.47■■□□□ 1.19
CDH11-206ENST00000562998 M0R2C6 588 aa22.47■■□□□ 1.19
CDH11-206ENST00000562998 PDE4AP27815 886 aa22.47■■□□□ 1.19
CDH11-206ENST00000562998 SHMT1P34896 483 aa22.47■■□□□ 1.19
CDH11-206ENST00000562998 PRRT2Q7Z6L0 340 aaPredicted RBP22.47■■□□□ 1.19
CDH11-206ENST00000562998 CCDC84Q86UT8 332 aaPredicted RBP22.47■■□□□ 1.19
CDH11-206ENST00000562998 TBC1D2Q9BYX2 928 aa22.47■■□□□ 1.19
CDH11-206ENST00000562998 SLC4A4Q9Y6R1 1079 aa22.47■■□□□ 1.19
CDH11-206ENST00000562998 GPR25O00155 361 aa22.46■■□□□ 1.19
CDH11-206ENST00000562998 GPAA1O43292 621 aa22.46■■□□□ 1.19
CDH11-206ENST00000562998 POLR3DP05423 398 aaPredicted RBP22.46■■□□□ 1.19
CDH11-206ENST00000562998 ASNSP08243 561 aa22.46■■□□□ 1.19
CDH11-206ENST00000562998 CYP2D6P10635 497 aa22.46■■□□□ 1.19
CDH11-206ENST00000562998 SHROOM1Q2M3G4 852 aaPredicted RBP22.46■■□□□ 1.19
CDH11-206ENST00000562998 C12orf60Q5U649 245 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms