RNA–Protein interactions for RNA: ENST00000562956.1

LINC00838-201, long intergenic non-protein coding RNA 838, humanhuman

TSL 1 (best) BASIC

Gene LINC00838, Length 2,936 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00838-201ENST00000562956 ZC3H12CQ9C0D7 883 aaKnown RBP10.98□□□□□ -0.65
LINC00838-201ENST00000562956 PDGFDQ9GZP0 370 aaPredicted RBP10.98□□□□□ -0.65
LINC00838-201ENST00000562956 COA1Q9GZY4 146 aa10.98□□□□□ -0.65
LINC00838-201ENST00000562956 FAM205AQ6ZU69 1335 aa10.97□□□□□ -0.65
LINC00838-201ENST00000562956 UBE2Q2LH0YL09 131 aa10.97□□□□□ -0.65
LINC00838-201ENST00000562956 LDHCP07864 332 aa10.97□□□□□ -0.65
LINC00838-201ENST00000562956 PCP11498 1178 aaKnown RBP10.97□□□□□ -0.65
LINC00838-201ENST00000562956 BTDP43251 543 aa10.97□□□□□ -0.65
LINC00838-201ENST00000562956 TGFBRAP1Q8WUH2 860 aa10.97□□□□□ -0.65
LINC00838-201ENST00000562956 FTOQ9C0B1 505 aaKnown RBP eCLIP10.97□□□□□ -0.65
LINC00838-201ENST00000562956 NID2Q14112 1375 aa10.97□□□□□ -0.65
LINC00838-201ENST00000562956 CHD4Q14839 1912 aa10.97□□□□□ -0.65
LINC00838-201ENST00000562956 BAZ2AQ9UIF9 1905 aaKnown RBP10.97□□□□□ -0.65
LINC00838-201ENST00000562956 H0YIN7 160 aa10.97□□□□□ -0.65
LINC00838-201ENST00000562956 ORC4O43929 436 aa10.97□□□□□ -0.65
LINC00838-201ENST00000562956 CHRNA5P30532 468 aa10.97□□□□□ -0.65
LINC00838-201ENST00000562956 DOK7Q18PE1 504 aa10.97□□□□□ -0.65
LINC00838-201ENST00000562956 ZNF654Q8IZM8 581 aa10.97□□□□□ -0.65
LINC00838-201ENST00000562956 TBC1D22AQ8WUA7 517 aa10.97□□□□□ -0.65
LINC00838-201ENST00000562956 SYAP1Q96A49 352 aaPredicted RBP10.97□□□□□ -0.65
LINC00838-201ENST00000562956 NOL10Q9BSC4 688 aaKnown RBP10.97□□□□□ -0.65
LINC00838-201ENST00000562956 GPR75-ASB3A0A0A6YYF3 556 aa10.96□□□□□ -0.65
LINC00838-201ENST00000562956 RRP9O43818 475 aaKnown RBP10.96□□□□□ -0.65
LINC00838-201ENST00000562956 IARSP41252 1262 aaKnown RBP10.96□□□□□ -0.65
LINC00838-201ENST00000562956 CEBPZQ03701 1054 aaKnown RBP10.96□□□□□ -0.65
LINC00838-201ENST00000562956 FAM47AQ5JRC9 791 aa10.96□□□□□ -0.65
LINC00838-201ENST00000562956 C12orf60Q5U649 245 aa10.96□□□□□ -0.65
LINC00838-201ENST00000562956 CPLX2Q6PUV4 134 aaKnown RBP10.96□□□□□ -0.65
LINC00838-201ENST00000562956 DEFB132Q7Z7B7 95 aa10.96□□□□□ -0.65
LINC00838-201ENST00000562956 FBXW7Q969H0 707 aa10.96□□□□□ -0.65
LINC00838-201ENST00000562956 ARID3AQ99856 593 aa10.96□□□□□ -0.65
LINC00838-201ENST00000562956 ALG1Q9BT22 464 aa10.96□□□□□ -0.65
LINC00838-201ENST00000562956 NMT2O60551 498 aa10.96□□□□□ -0.66
LINC00838-201ENST00000562956 RTN1Q16799 776 aa10.96□□□□□ -0.66
LINC00838-201ENST00000562956 LRSAM1Q6UWE0 723 aa10.96□□□□□ -0.66
LINC00838-201ENST00000562956 MAPKAPK5Q8IW41 473 aa10.96□□□□□ -0.66
LINC00838-201ENST00000562956 CMTR1Q8N1G2 835 aaKnown RBP10.96□□□□□ -0.66
LINC00838-201ENST00000562956 CERS5Q8N5B7 392 aa10.96□□□□□ -0.66
LINC00838-201ENST00000562956 FBXO41Q8TF61 875 aa10.96□□□□□ -0.66
LINC00838-201ENST00000562956 NUP133Q8WUM0 1156 aa10.96□□□□□ -0.66
LINC00838-201ENST00000562956 TAOK2Q9UL54 1235 aa10.96□□□□□ -0.66
LINC00838-201ENST00000562956 CCDC88AQ3V6T2 1871 aa10.96□□□□□ -0.66
LINC00838-201ENST00000562956 GOLGB1Q14789 3259 aaKnown RBP10.96□□□□□ -0.66
LINC00838-201ENST00000562956 SLC3A2P08195 630 aaKnown RBP10.95□□□□□ -0.66
LINC00838-201ENST00000562956 STYK1Q6J9G0 422 aa10.95□□□□□ -0.66
LINC00838-201ENST00000562956 IQCA1Q86XH1 822 aa10.95□□□□□ -0.66
LINC00838-201ENST00000562956 FANCBQ8NB91 859 aa10.95□□□□□ -0.66
LINC00838-201ENST00000562956 DYNLL2Q96FJ2 89 aa10.95□□□□□ -0.66
LINC00838-201ENST00000562956 FAM163AQ96GL9 167 aaPredicted RBP10.95□□□□□ -0.66
LINC00838-201ENST00000562956 MXD3Q9BW11 206 aa10.95□□□□□ -0.66
LINC00838-201ENST00000562956 SLC26A6Q9BXS9 759 aa10.95□□□□□ -0.66
LINC00838-201ENST00000562956 TMX4Q9H1E5 349 aaPredicted RBP10.95□□□□□ -0.66
LINC00838-201ENST00000562956 ZNF219Q9P2Y4 722 aaPredicted RBP10.95□□□□□ -0.66
LINC00838-201ENST00000562956 CFAP45Q9UL16 551 aa10.95□□□□□ -0.66
LINC00838-201ENST00000562956 KIAA1551Q9HCM1 1747 aa10.95□□□□□ -0.66
LINC00838-201ENST00000562956 KIF28PB7ZC32 967 aa10.95□□□□□ -0.66
LINC00838-201ENST00000562956 IFNAR1P17181 557 aa10.95□□□□□ -0.66
LINC00838-201ENST00000562956 CLCN1P35523 988 aa10.95□□□□□ -0.66
LINC00838-201ENST00000562956 PDE4BQ07343 736 aa10.95□□□□□ -0.66
LINC00838-201ENST00000562956 CCDC183Q5T5S1 534 aa10.95□□□□□ -0.66
LINC00838-201ENST00000562956 IFIT1BQ5T764 474 aaKnown RBP10.95□□□□□ -0.66
LINC00838-201ENST00000562956 PGBD1Q96JS3 809 aa10.95□□□□□ -0.66
LINC00838-201ENST00000562956 USP28Q96RU2 1077 aa10.95□□□□□ -0.66
LINC00838-201ENST00000562956 SAP30BPQ9UHR5 308 aaKnown RBP10.95□□□□□ -0.66
LINC00838-201ENST00000562956 GAKO14976 1311 aa10.95□□□□□ -0.66
LINC00838-201ENST00000562956 FMNL1O95466 1100 aaPredicted RBP10.95□□□□□ -0.66
LINC00838-201ENST00000562956 POLR3DP05423 398 aaPredicted RBP10.95□□□□□ -0.66
LINC00838-201ENST00000562956 GUCY1A2P33402 732 aa10.95□□□□□ -0.66
LINC00838-201ENST00000562956 PLCD1P51178 756 aa10.95□□□□□ -0.66
LINC00838-201ENST00000562956 RCAN1P53805 252 aa10.95□□□□□ -0.66
LINC00838-201ENST00000562956 RHBDL3P58872 404 aa10.95□□□□□ -0.66
LINC00838-201ENST00000562956 SSRP1Q08945 709 aaKnown RBP10.95□□□□□ -0.66
LINC00838-201ENST00000562956 NBPF11Q86T75 865 aa10.95□□□□□ -0.66
LINC00838-201ENST00000562956 CCDC82Q8N4S0 544 aa10.95□□□□□ -0.66
LINC00838-201ENST00000562956 RBSNQ9H1K0 784 aa10.95□□□□□ -0.66
LINC00838-201ENST00000562956 F8W031 263 aaPredicted RBP10.94□□□□□ -0.66
LINC00838-201ENST00000562956 LIG1P18858 919 aa10.94□□□□□ -0.66
LINC00838-201ENST00000562956 KIF23Q02241 960 aaPredicted RBP10.94□□□□□ -0.66
LINC00838-201ENST00000562956 TEX11Q8IYF3 940 aa10.94□□□□□ -0.66
LINC00838-201ENST00000562956 KRT40Q6A162 431 aa10.94□□□□□ -0.66
LINC00838-201ENST00000562956 CERS3Q8IU89 383 aa10.94□□□□□ -0.66
LINC00838-201ENST00000562956 SLF2Q8IX21 1173 aa10.94□□□□□ -0.66
LINC00838-201ENST00000562956 CRACR2BQ8N4Y2 399 aaPredicted RBP10.94□□□□□ -0.66
LINC00838-201ENST00000562956 ZNF396Q96N95 335 aaPredicted RBP10.94□□□□□ -0.66
LINC00838-201ENST00000562956 KCNQ5Q9NR82 932 aa10.94□□□□□ -0.66
LINC00838-201ENST00000562956 RCOR1Q9UKL0 485 aa10.94□□□□□ -0.66
LINC00838-201ENST00000562956 DAGLAQ9Y4D2 1042 aa10.94□□□□□ -0.66
LINC00838-201ENST00000562956 STK36Q9NRP7 1315 aa10.94□□□□□ -0.66
LINC00838-201ENST00000562956 ROBO3Q96MS0 1386 aa10.93□□□□□ -0.66
LINC00838-201ENST00000562956 CCDC196A0A1B0GTZ2 297 aa10.93□□□□□ -0.66
LINC00838-201ENST00000562956 GOLGA6L4A6NEF3 574 aa10.93□□□□□ -0.66
LINC00838-201ENST00000562956 TSPY2A6NKD2 308 aa10.93□□□□□ -0.66
LINC00838-201ENST00000562956 TROAPQ12815 778 aa10.93□□□□□ -0.66
LINC00838-201ENST00000562956 CATIPQ7Z7H3 387 aa10.93□□□□□ -0.66
LINC00838-201ENST00000562956 SLC44A5Q8NCS7 719 aa10.93□□□□□ -0.66
LINC00838-201ENST00000562956 EYA3Q99504 573 aa10.93□□□□□ -0.66
LINC00838-201ENST00000562956 DBNDD1Q9H9R9 158 aa10.93□□□□□ -0.66
LINC00838-201ENST00000562956 FLT1P17948 1338 aa10.93□□□□□ -0.66
LINC00838-201ENST00000562956 G3V3G9 751 aa10.93□□□□□ -0.66
LINC00838-201ENST00000562956 PLCG2P16885 1265 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms