RNA–Protein interactions for RNA: ENST00000561992.5

TCF4-211, Transcript of transcription factor 4, humanhuman

TSL 2 BASIC

Gene TCF4, Length 2,184 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-211ENST00000561992 YY1AP1Q9H869 796 aa11.28□□□□□ -0.6
TCF4-211ENST00000561992 CWC25Q9NXE8 425 aaPredicted RBP11.28□□□□□ -0.6
TCF4-211ENST00000561992 RRP15Q9Y3B9 282 aaKnown RBP11.28□□□□□ -0.6
TCF4-211ENST00000561992 A0A1B0GUL7 405 aa11.27□□□□□ -0.6
TCF4-211ENST00000561992 CTAGE9A4FU28 777 aa11.27□□□□□ -0.6
TCF4-211ENST00000561992 SH2B2O14492 632 aaPredicted RBP11.27□□□□□ -0.6
TCF4-211ENST00000561992 SAFBQ15424 915 aaKnown RBP eCLIP11.27□□□□□ -0.6
TCF4-211ENST00000561992 RILPL1Q5EBL4 403 aa11.27□□□□□ -0.6
TCF4-211ENST00000561992 TTLL5Q6EMB2 1281 aa11.27□□□□□ -0.6
TCF4-211ENST00000561992 WDR93Q6P2C0 686 aa11.27□□□□□ -0.6
TCF4-211ENST00000561992 SGMS1Q86VZ5 419 aa11.27□□□□□ -0.6
TCF4-211ENST00000561992 ANKZF1Q9H8Y5 726 aa11.27□□□□□ -0.6
TCF4-211ENST00000561992 ZCCHC17Q9NP64 241 aaKnown RBP11.27□□□□□ -0.6
TCF4-211ENST00000561992 H3BQF6 201 aa11.27□□□□□ -0.61
TCF4-211ENST00000561992 FOXP2O15409 715 aa11.27□□□□□ -0.61
TCF4-211ENST00000561992 GTPBP6O43824 516 aaPredicted RBP11.27□□□□□ -0.61
TCF4-211ENST00000561992 PHKG2P15735 406 aa11.27□□□□□ -0.61
TCF4-211ENST00000561992 PTPREP23469 700 aa11.27□□□□□ -0.61
TCF4-211ENST00000561992 MAGEA9P43362 315 aa11.27□□□□□ -0.61
TCF4-211ENST00000561992 TRIM14Q14142 442 aa11.27□□□□□ -0.61
TCF4-211ENST00000561992 FILIP1LQ4L180 1135 aa11.27□□□□□ -0.61
TCF4-211ENST00000561992 FOXP4Q8IVH2 680 aaPredicted RBP11.27□□□□□ -0.61
TCF4-211ENST00000561992 NFATC2IPQ8NCF5 419 aa11.27□□□□□ -0.61
TCF4-211ENST00000561992 RAPGEF4Q8WZA2 1011 aa11.27□□□□□ -0.61
TCF4-211ENST00000561992 ZNF496Q96IT1 587 aaPredicted RBP11.27□□□□□ -0.61
TCF4-211ENST00000561992 DCAF5Q96JK2 942 aa11.27□□□□□ -0.61
TCF4-211ENST00000561992 ZNF512BQ96KM6 892 aaPredicted RBP11.27□□□□□ -0.61
TCF4-211ENST00000561992 MTA3Q9BTC8 594 aa11.27□□□□□ -0.61
TCF4-211ENST00000561992 BRMS1Q9HCU9 246 aa11.27□□□□□ -0.61
TCF4-211ENST00000561992 CEP126Q9P2H0 1117 aa11.27□□□□□ -0.61
TCF4-211ENST00000561992 BMP6P22004 513 aa11.26□□□□□ -0.61
TCF4-211ENST00000561992 PBX1P40424 430 aa11.26□□□□□ -0.61
TCF4-211ENST00000561992 IARSP41252 1262 aaKnown RBP11.26□□□□□ -0.61
TCF4-211ENST00000561992 LIFRP42702 1097 aa11.26□□□□□ -0.61
TCF4-211ENST00000561992 PIP4K2AP48426 406 aaPredicted RBP11.26□□□□□ -0.61
TCF4-211ENST00000561992 RCAN1P53805 252 aa11.26□□□□□ -0.61
TCF4-211ENST00000561992 SF3B2Q13435 895 aaKnown RBP11.26□□□□□ -0.61
TCF4-211ENST00000561992 SPATA1Q5VX52 437 aa11.26□□□□□ -0.61
TCF4-211ENST00000561992 TMTC1Q8IUR5 882 aa11.26□□□□□ -0.61
TCF4-211ENST00000561992 IFNL2Q8IZJ0 200 aa11.26□□□□□ -0.61
TCF4-211ENST00000561992 ZFP91Q96JP5 570 aaPredicted RBP11.26□□□□□ -0.61
TCF4-211ENST00000561992 FOXP1Q9H334 677 aaPredicted RBP11.26□□□□□ -0.61
TCF4-211ENST00000561992 A0A0G2JLW4 131 aa11.26□□□□□ -0.61
TCF4-211ENST00000561992 CTAGE15A4D2H0 777 aa11.26□□□□□ -0.61
TCF4-211ENST00000561992 CTAGE8P0CG41 777 aa11.26□□□□□ -0.61
TCF4-211ENST00000561992 TATP17735 454 aaPredicted RBP11.26□□□□□ -0.61
TCF4-211ENST00000561992 AARSP49588 968 aaKnown RBP eCLIP11.26□□□□□ -0.61
TCF4-211ENST00000561992 TIMM10P62072 90 aa11.26□□□□□ -0.61
TCF4-211ENST00000561992 PDE4BQ07343 736 aa11.26□□□□□ -0.61
TCF4-211ENST00000561992 WASHC4Q2M389 1173 aa11.26□□□□□ -0.61
TCF4-211ENST00000561992 MAP9Q49MG5 647 aa11.26□□□□□ -0.61
TCF4-211ENST00000561992 ISM2Q6H9L7 571 aa11.26□□□□□ -0.61
TCF4-211ENST00000561992 CTAGE6Q86UF2 777 aa11.26□□□□□ -0.61
TCF4-211ENST00000561992 NOSTRINQ8IVI9 506 aa11.26□□□□□ -0.61
TCF4-211ENST00000561992 CTAGE4Q8IX94 777 aa11.26□□□□□ -0.61
TCF4-211ENST00000561992 RPGRIP1Q96KN7 1286 aa11.26□□□□□ -0.61
TCF4-211ENST00000561992 NAPGQ99747 312 aaPredicted RBP11.26□□□□□ -0.61
TCF4-211ENST00000561992 GPHNQ9NQX3 736 aaPredicted RBP11.26□□□□□ -0.61
TCF4-211ENST00000561992 RSPH14Q9UHP6 348 aa11.26□□□□□ -0.61
TCF4-211ENST00000561992 PARP4Q9UKK3 1724 aaKnown RBP11.25□□□□□ -0.61
TCF4-211ENST00000561992 ZBTB43O43298 467 aa11.25□□□□□ -0.61
TCF4-211ENST00000561992 MFAP3LO75121 409 aa11.25□□□□□ -0.61
TCF4-211ENST00000561992 ADKP55263 362 aaKnown RBP11.25□□□□□ -0.61
TCF4-211ENST00000561992 TTF1Q15361 905 aaPredicted RBP11.25□□□□□ -0.61
TCF4-211ENST00000561992 ALX1Q15699 326 aa11.25□□□□□ -0.61
TCF4-211ENST00000561992 APOA5Q6Q788 366 aa11.25□□□□□ -0.61
TCF4-211ENST00000561992 HS6ST3Q8IZP7 471 aa11.25□□□□□ -0.61
TCF4-211ENST00000561992 MRPL44Q9H9J2 332 aaKnown RBP11.25□□□□□ -0.61
TCF4-211ENST00000561992 PDE11AQ9HCR9 933 aa11.25□□□□□ -0.61
TCF4-211ENST00000561992 VPS18Q9P253 973 aa11.25□□□□□ -0.61
TCF4-211ENST00000561992 FBXO2Q9UK22 296 aaPredicted RBP11.25□□□□□ -0.61
TCF4-211ENST00000561992 SRPRBQ9Y5M8 271 aaKnown RBP11.25□□□□□ -0.61
TCF4-211ENST00000561992 FMNL1O95466 1100 aaPredicted RBP11.24□□□□□ -0.61
TCF4-211ENST00000561992 BMP15O95972 392 aa11.24□□□□□ -0.61
TCF4-211ENST00000561992 NOP2P46087 812 aaKnown RBP11.24□□□□□ -0.61
TCF4-211ENST00000561992 SPAG1Q07617 926 aa11.24□□□□□ -0.61
TCF4-211ENST00000561992 SSRP1Q08945 709 aaKnown RBP11.24□□□□□ -0.61
TCF4-211ENST00000561992 NTRK3Q16288 839 aa11.24□□□□□ -0.61
TCF4-211ENST00000561992 KIF4BQ2VIQ3 1234 aa11.24□□□□□ -0.61
TCF4-211ENST00000561992 PPM1EQ8WY54 764 aa11.24□□□□□ -0.61
TCF4-211ENST00000561992 WWC3Q9ULE0 1092 aa11.24□□□□□ -0.61
TCF4-211ENST00000561992 TJP1Q07157 1748 aa11.24□□□□□ -0.61
TCF4-211ENST00000561992 GPAA1O43292 621 aa11.24□□□□□ -0.61
TCF4-211ENST00000561992 IFNAR1P17181 557 aa11.24□□□□□ -0.61
TCF4-211ENST00000561992 FMR1Q06787 632 aaKnown RBP eCLIP11.24□□□□□ -0.61
TCF4-211ENST00000561992 SLC39A6Q13433 755 aa11.24□□□□□ -0.61
TCF4-211ENST00000561992 CASP8Q14790 479 aa11.24□□□□□ -0.61
TCF4-211ENST00000561992 CDKAL1Q5VV42 579 aa11.24□□□□□ -0.61
TCF4-211ENST00000561992 IGSF22Q8N9C0 903 aa11.24□□□□□ -0.61
TCF4-211ENST00000561992 PYM1Q9BRP8 204 aaKnown RBP11.24□□□□□ -0.61
TCF4-211ENST00000561992 EPC1Q9H2F5 836 aa11.24□□□□□ -0.61
TCF4-211ENST00000561992 NUP188Q5SRE5 1749 aa11.24□□□□□ -0.61
TCF4-211ENST00000561992 TARSL2A2RTX5 802 aaKnown RBP11.23□□□□□ -0.61
TCF4-211ENST00000561992 VGLL3A8MV65 326 aa11.23□□□□□ -0.61
TCF4-211ENST00000561992 CPP00450 1065 aa11.23□□□□□ -0.61
TCF4-211ENST00000561992 MMP1P03956 469 aa11.23□□□□□ -0.61
TCF4-211ENST00000561992 CDC27P30260 824 aa11.23□□□□□ -0.61
TCF4-211ENST00000561992 HAND2P61296 217 aa11.23□□□□□ -0.61
TCF4-211ENST00000561992 GOLGA8FQ08AF8 430 aa11.23□□□□□ -0.61
TCF4-211ENST00000561992 GOLGA8DPQ0D2H9 430 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms