RNA–Protein interactions for RNA: ENST00000561869.1

CHD9-204, Transcript of chromodomain helicase DNA binding protein 9, human

TSL 2

Gene CHD9, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD9-204	ENST00000561869	NOC4L	Q9BVI4	516 aa	Known RBP	4.27	□□□□□ -1.73
CHD9-204	ENST00000561869	DUSP23	Q9BVJ7	150 aa		4.27	□□□□□ -1.73
CHD9-204	ENST00000561869	GFRA2	O00451	464 aa		4.26	□□□□□ -1.73
CHD9-204	ENST00000561869	YBX3	P16989	372 aa	Known RBP eCLIP	4.26	□□□□□ -1.73
CHD9-204	ENST00000561869	TFE3	P19532	575 aa	Predicted RBP	4.26	□□□□□ -1.73
CHD9-204	ENST00000561869	MAP3K11	Q16584	847 aa		4.26	□□□□□ -1.73
CHD9-204	ENST00000561869	WFDC3	Q8IUB2	231 aa		4.26	□□□□□ -1.73
CHD9-204	ENST00000561869	PHF6	Q8IWS0	365 aa	Known RBP eCLIP	4.26	□□□□□ -1.73
CHD9-204	ENST00000561869	PLPPR2	Q96GM1	343 aa		4.26	□□□□□ -1.73
CHD9-204	ENST00000561869	LRRC4C	Q9HCJ2	640 aa		4.26	□□□□□ -1.73
CHD9-204	ENST00000561869	CCDC39	Q9UFE4	941 aa		4.26	□□□□□ -1.73
CHD9-204	ENST00000561869	SNCAIP	Q9Y6H5	919 aa		4.26	□□□□□ -1.73
CHD9-204	ENST00000561869	SORBS3	O60504	671 aa		4.25	□□□□□ -1.73
CHD9-204	ENST00000561869	SEPT6	Q14141	434 aa		4.25	□□□□□ -1.73
CHD9-204	ENST00000561869	SLBP	Q14493	270 aa	Known RBP eCLIP	4.25	□□□□□ -1.73
CHD9-204	ENST00000561869	CYP27C1	Q4G0S4	372 aa		4.25	□□□□□ -1.73
CHD9-204	ENST00000561869	CBLL1	Q75N03	491 aa		4.25	□□□□□ -1.73
CHD9-204	ENST00000561869	PHC3	Q8NDX5	983 aa		4.25	□□□□□ -1.73
CHD9-204	ENST00000561869	CRELD1	Q96HD1	420 aa		4.25	□□□□□ -1.73
CHD9-204	ENST00000561869	HEXIM2	Q96MH2	286 aa	Known RBP	4.25	□□□□□ -1.73
CHD9-204	ENST00000561869	FBRS	Q9HAH7	460 aa		4.25	□□□□□ -1.73
CHD9-204	ENST00000561869	BSDC1	Q9NW68	430 aa	Predicted RBP	4.25	□□□□□ -1.73
CHD9-204	ENST00000561869	TLR6	Q9Y2C9	796 aa		4.25	□□□□□ -1.73
CHD9-204	ENST00000561869	OXCT1	P55809	520 aa		4.24	□□□□□ -1.73
CHD9-204	ENST00000561869	MRPL58	Q14197	206 aa	Known RBP	4.24	□□□□□ -1.73
CHD9-204	ENST00000561869	WIPI1	Q5MNZ9	446 aa	Predicted RBP	4.24	□□□□□ -1.73
CHD9-204	ENST00000561869	LCE1D	Q5T752	114 aa		4.24	□□□□□ -1.73
CHD9-204	ENST00000561869	HDX	Q7Z353	690 aa		4.24	□□□□□ -1.73
CHD9-204	ENST00000561869	TOP6BL	Q8N6T0	577 aa		4.24	□□□□□ -1.73
CHD9-204	ENST00000561869	FAM181A	Q8N9Y4	354 aa		4.24	□□□□□ -1.73
CHD9-204	ENST00000561869	ZNF507	Q8TCN5	953 aa		4.24	□□□□□ -1.73
CHD9-204	ENST00000561869	ELMO3	Q96BJ8	720 aa		4.24	□□□□□ -1.73
CHD9-204	ENST00000561869	WNT10A	Q9GZT5	417 aa		4.24	□□□□□ -1.73
CHD9-204	ENST00000561869	SSU72	Q9NP77	194 aa	Known RBP	4.24	□□□□□ -1.73
CHD9-204	ENST00000561869	ARID1B	Q8NFD5	2236 aa	Predicted RBP	4.23	□□□□□ -1.73
CHD9-204	ENST00000561869	CNTNAP4	Q9C0A0	1308 aa		4.23	□□□□□ -1.73
CHD9-204	ENST00000561869	PRAMEF27	A3QJZ7	478 aa		4.23	□□□□□ -1.73
CHD9-204	ENST00000561869	FAM221A	A4D161	298 aa		4.23	□□□□□ -1.73
CHD9-204	ENST00000561869	EOMES	O95936	686 aa		4.23	□□□□□ -1.73
CHD9-204	ENST00000561869	RLBP1	P12271	317 aa		4.23	□□□□□ -1.73
CHD9-204	ENST00000561869	CAP2	P40123	477 aa		4.23	□□□□□ -1.73
CHD9-204	ENST00000561869	NKG7	Q16617	165 aa		4.23	□□□□□ -1.73
CHD9-204	ENST00000561869	LDLRAD1	Q5T700	205 aa		4.23	□□□□□ -1.73
CHD9-204	ENST00000561869	OGFOD2	Q6N063	350 aa		4.23	□□□□□ -1.73
CHD9-204	ENST00000561869	ARMCX6	Q7L4S7	300 aa		4.23	□□□□□ -1.73
CHD9-204	ENST00000561869	VSIG10L	Q86VR7	867 aa		4.23	□□□□□ -1.73
CHD9-204	ENST00000561869	PLD6	Q8N2A8	252 aa	Known RBP	4.23	□□□□□ -1.73
CHD9-204	ENST00000561869	GIPC2	Q8TF65	315 aa		4.23	□□□□□ -1.73
CHD9-204	ENST00000561869	RSRP1	Q9BUV0	290 aa		4.23	□□□□□ -1.73
CHD9-204	ENST00000561869	BCL2L13	Q9BXK5	485 aa		4.23	□□□□□ -1.73
CHD9-204	ENST00000561869	MIR1-1HG	Q9H1L0	117 aa		4.23	□□□□□ -1.73
CHD9-204	ENST00000561869	MKNK2	Q9HBH9	465 aa		4.23	□□□□□ -1.73
CHD9-204	ENST00000561869	PAK6	Q9NQU5	681 aa	Predicted RBP	4.23	□□□□□ -1.73
CHD9-204	ENST00000561869	PRDM10	Q9NQV6	1147 aa		4.23	□□□□□ -1.73
CHD9-204	ENST00000561869	VTI1B	Q9UEU0	232 aa		4.23	□□□□□ -1.73
CHD9-204	ENST00000561869	ANGEL1	Q9UNK9	670 aa	Known RBP	4.23	□□□□□ -1.73
CHD9-204	ENST00000561869	PLAGL2	Q9UPG8	496 aa		4.23	□□□□□ -1.73
CHD9-204	ENST00000561869	TACC3	Q9Y6A5	838 aa		4.23	□□□□□ -1.73
CHD9-204	ENST00000561869		F6X3S4	739 aa		4.22	□□□□□ -1.73
CHD9-204	ENST00000561869	RBAK-RBAKDN	I3L0D1	243 aa		4.22	□□□□□ -1.73
CHD9-204	ENST00000561869	LRIG2	O94898	1065 aa		4.22	□□□□□ -1.73
CHD9-204	ENST00000561869	SLITRK5	O94991	958 aa		4.22	□□□□□ -1.73
CHD9-204	ENST00000561869	PF4	P02776	101 aa		4.22	□□□□□ -1.73
CHD9-204	ENST00000561869	GART	P22102	1010 aa		4.22	□□□□□ -1.73
CHD9-204	ENST00000561869	GRK4	P32298	578 aa		4.22	□□□□□ -1.73
CHD9-204	ENST00000561869	FZD5	Q13467	585 aa		4.22	□□□□□ -1.73
CHD9-204	ENST00000561869	TSNAXIP1	Q2TAA8	658 aa		4.22	□□□□□ -1.73
CHD9-204	ENST00000561869	CDC37L1	Q7L3B6	337 aa		4.22	□□□□□ -1.73
CHD9-204	ENST00000561869	SPRED2	Q7Z698	418 aa		4.22	□□□□□ -1.73
CHD9-204	ENST00000561869	CCDC84	Q86UT8	332 aa	Predicted RBP	4.22	□□□□□ -1.73
CHD9-204	ENST00000561869	HOMEZ	Q8IX15	550 aa		4.22	□□□□□ -1.73
CHD9-204	ENST00000561869	KCT2	Q8NC54	265 aa		4.22	□□□□□ -1.73
CHD9-204	ENST00000561869	NETO1	Q8TDF5	533 aa		4.22	□□□□□ -1.73
CHD9-204	ENST00000561869	BCL7C	Q8WUZ0	217 aa	Predicted RBP	4.22	□□□□□ -1.73
CHD9-204	ENST00000561869	RHOV	Q96L33	236 aa		4.22	□□□□□ -1.73
CHD9-204	ENST00000561869	KRTAP4-7	Q9BYR0	210 aa		4.22	□□□□□ -1.73
CHD9-204	ENST00000561869	TNKS2	Q9H2K2	1166 aa		4.22	□□□□□ -1.73
CHD9-204	ENST00000561869	PICK1	Q9NRD5	415 aa		4.22	□□□□□ -1.73
CHD9-204	ENST00000561869	ZBTB7C	A1YPR0	619 aa		4.21	□□□□□ -1.74
CHD9-204	ENST00000561869	IGF2BP3	O00425	579 aa	Known RBP eCLIP	4.21	□□□□□ -1.74
CHD9-204	ENST00000561869	CILP	O75339	1184 aa		4.21	□□□□□ -1.74
CHD9-204	ENST00000561869	ZNF16	P17020	682 aa	Predicted RBP	4.21	□□□□□ -1.74
CHD9-204	ENST00000561869	ITGB5	P18084	799 aa		4.21	□□□□□ -1.74
CHD9-204	ENST00000561869	JAG1	P78504	1218 aa		4.21	□□□□□ -1.74
CHD9-204	ENST00000561869	RPL6	Q02878	288 aa	Known RBP	4.21	□□□□□ -1.74
CHD9-204	ENST00000561869	LMNB2	Q03252	620 aa		4.21	□□□□□ -1.74
CHD9-204	ENST00000561869	BNIP3	Q12983	259 aa		4.21	□□□□□ -1.74
CHD9-204	ENST00000561869	CAMK2G	Q13555	558 aa	Predicted RBP	4.21	□□□□□ -1.74
CHD9-204	ENST00000561869	TMCO4	Q5TGY1	634 aa		4.21	□□□□□ -1.74
CHD9-204	ENST00000561869	BNC2	Q6ZN30	1099 aa	Predicted RBP	4.21	□□□□□ -1.74
CHD9-204	ENST00000561869	ERMP1	Q7Z2K6	904 aa		4.21	□□□□□ -1.74
CHD9-204	ENST00000561869	HID1	Q8IV36	788 aa		4.21	□□□□□ -1.74
CHD9-204	ENST00000561869	RIN3	Q8TB24	985 aa		4.21	□□□□□ -1.74
CHD9-204	ENST00000561869	JARID2	Q92833	1246 aa	Predicted RBP	4.21	□□□□□ -1.74
CHD9-204	ENST00000561869	TMEM74	Q96NL1	305 aa		4.21	□□□□□ -1.74
CHD9-204	ENST00000561869	FOXQ1	Q9C009	403 aa		4.21	□□□□□ -1.74
CHD9-204	ENST00000561869	MRS2	Q9HD23	443 aa		4.21	□□□□□ -1.74
CHD9-204	ENST00000561869	TJP2	Q9UDY2	1190 aa		4.21	□□□□□ -1.74
CHD9-204	ENST00000561869	F13A1	P00488	732 aa		4.2	□□□□□ -1.74
CHD9-204	ENST00000561869	CST3	P01034	146 aa	Predicted RBP	4.2	□□□□□ -1.74

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