RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 EPB41L4AQ9HCS5 686 aaPredicted RBP7.77□□□□□ -1.17
CAPN3-210ENST00000561817 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.77□□□□□ -1.17
CAPN3-210ENST00000561817 DENND2AQ9ULE3 1009 aa7.77□□□□□ -1.17
CAPN3-210ENST00000561817 TPCN1Q9ULQ1 816 aa7.77□□□□□ -1.17
CAPN3-210ENST00000561817 IQSEC3Q9UPP2 1182 aaPredicted RBP7.77□□□□□ -1.17
CAPN3-210ENST00000561817 KIAA1551Q9HCM1 1747 aa7.77□□□□□ -1.17
CAPN3-210ENST00000561817 XDHP47989 1333 aa7.77□□□□□ -1.17
CAPN3-210ENST00000561817 MYH13Q9UKX3 1938 aa7.76□□□□□ -1.17
CAPN3-210ENST00000561817 TIAM2Q8IVF5 1701 aa7.76□□□□□ -1.17
CAPN3-210ENST00000561817 TESPA1A2RU30 521 aaPredicted RBP7.76□□□□□ -1.17
CAPN3-210ENST00000561817 GSG1L2A8MUP6 293 aa7.76□□□□□ -1.17
CAPN3-210ENST00000561817 SRGNP10124 158 aa7.76□□□□□ -1.17
CAPN3-210ENST00000561817 DNAJB2P25686 324 aa7.76□□□□□ -1.17
CAPN3-210ENST00000561817 MCM4P33991 863 aa7.76□□□□□ -1.17
CAPN3-210ENST00000561817 COPS2P61201 443 aa7.76□□□□□ -1.17
CAPN3-210ENST00000561817 ME3Q16798 604 aa7.76□□□□□ -1.17
CAPN3-210ENST00000561817 CAVIN4Q5BKX8 364 aa7.76□□□□□ -1.17
CAPN3-210ENST00000561817 TDRD7Q8NHU6 1098 aaKnown RBP7.76□□□□□ -1.17
CAPN3-210ENST00000561817 NKX2-3Q8TAU0 364 aa7.76□□□□□ -1.17
CAPN3-210ENST00000561817 SLC16A10Q8TF71 515 aa7.76□□□□□ -1.17
CAPN3-210ENST00000561817 RPGRQ92834 1020 aaKnown RBP7.76□□□□□ -1.17
CAPN3-210ENST00000561817 ZSCAN31Q96LW9 406 aaPredicted RBP7.76□□□□□ -1.17
CAPN3-210ENST00000561817 TCEANC2Q96MN5 208 aa7.76□□□□□ -1.17
CAPN3-210ENST00000561817 RIOK1Q9BRS2 568 aaKnown RBP7.76□□□□□ -1.17
CAPN3-210ENST00000561817 GNL3LQ9NVN8 582 aaKnown RBP7.76□□□□□ -1.17
CAPN3-210ENST00000561817 CTNNA3Q9UI47 895 aa7.76□□□□□ -1.17
CAPN3-210ENST00000561817 TACC3Q9Y6A5 838 aa7.76□□□□□ -1.17
CAPN3-210ENST00000561817 PARP3Q9Y6F1 533 aa7.76□□□□□ -1.17
CAPN3-210ENST00000561817 BRCA1P38398 1863 aaKnown RBP7.76□□□□□ -1.17
CAPN3-210ENST00000561817 MAST2Q6P0Q8 1798 aa7.76□□□□□ -1.17
CAPN3-210ENST00000561817 SALL1Q9NSC2 1324 aa7.76□□□□□ -1.17
CAPN3-210ENST00000561817 PATL2C9JE40 543 aaKnown RBP7.75□□□□□ -1.17
CAPN3-210ENST00000561817 MBD4O95243 580 aa7.75□□□□□ -1.17
CAPN3-210ENST00000561817 BRD1O95696 1058 aa7.75□□□□□ -1.17
CAPN3-210ENST00000561817 ATP2B4P23634 1241 aa7.75□□□□□ -1.17
CAPN3-210ENST00000561817 GGCXP38435 758 aa7.75□□□□□ -1.17
CAPN3-210ENST00000561817 EVCP57679 992 aa7.75□□□□□ -1.17
CAPN3-210ENST00000561817 ANTXR2P58335 489 aa7.75□□□□□ -1.17
CAPN3-210ENST00000561817 NUCB2P80303 420 aa7.75□□□□□ -1.17
CAPN3-210ENST00000561817 NOL8Q76FK4 1167 aaKnown RBP7.75□□□□□ -1.17
CAPN3-210ENST00000561817 DHX32Q7L7V1 743 aaKnown RBP7.75□□□□□ -1.17
CAPN3-210ENST00000561817 TMC4Q7Z404 712 aa7.75□□□□□ -1.17
CAPN3-210ENST00000561817 TBC1D10CQ8IV04 446 aa7.75□□□□□ -1.17
CAPN3-210ENST00000561817 SP8Q8IXZ3 490 aa7.75□□□□□ -1.17
CAPN3-210ENST00000561817 MB21D2Q8IYB1 491 aaPredicted RBP7.75□□□□□ -1.17
CAPN3-210ENST00000561817 LCORLQ8N3X6 602 aa7.75□□□□□ -1.17
CAPN3-210ENST00000561817 NSUN4Q96CB9 384 aaKnown RBP7.75□□□□□ -1.17
CAPN3-210ENST00000561817 ARMT1Q9H993 441 aa7.75□□□□□ -1.17
CAPN3-210ENST00000561817 SH2B1Q9NRF2 756 aaPredicted RBP7.75□□□□□ -1.17
CAPN3-210ENST00000561817 POLLQ9UGP5 575 aa7.75□□□□□ -1.17
CAPN3-210ENST00000561817 SNED1Q8TER0 1413 aa7.75□□□□□ -1.17
CAPN3-210ENST00000561817 PRKAB2O43741 272 aa7.74□□□□□ -1.17
CAPN3-210ENST00000561817 HSP90AA1P07900 732 aaKnown RBP7.74□□□□□ -1.17
CAPN3-210ENST00000561817 IL1R1P14778 569 aa7.74□□□□□ -1.17
CAPN3-210ENST00000561817 NPR1P16066 1061 aa7.74□□□□□ -1.17
CAPN3-210ENST00000561817 CYP7A1P22680 504 aa7.74□□□□□ -1.17
CAPN3-210ENST00000561817 ANKRD1Q15327 319 aa7.74□□□□□ -1.17
CAPN3-210ENST00000561817 TMED8Q6PL24 325 aaPredicted RBP7.74□□□□□ -1.17
CAPN3-210ENST00000561817 Q6ZUG5 572 aa7.74□□□□□ -1.17
CAPN3-210ENST00000561817 IFNL3Q8IZI9 196 aa7.74□□□□□ -1.17
CAPN3-210ENST00000561817 TBC1D16Q8TBP0 767 aa7.74□□□□□ -1.17
CAPN3-210ENST00000561817 GPR101Q96P66 508 aaPredicted RBP7.74□□□□□ -1.17
CAPN3-210ENST00000561817 FHDC1Q9C0D6 1143 aaPredicted RBP7.74□□□□□ -1.17
CAPN3-210ENST00000561817 LRP2BPQ9P2M1 347 aa7.74□□□□□ -1.17
CAPN3-210ENST00000561817 ATP6V0A2Q9Y487 856 aa7.74□□□□□ -1.17
CAPN3-210ENST00000561817 ADGRG1Q9Y653 693 aa7.74□□□□□ -1.17
CAPN3-210ENST00000561817 V9GY48 417 aaPredicted RBP7.74□□□□□ -1.17
CAPN3-210ENST00000561817 CCDC88AQ3V6T2 1871 aa7.74□□□□□ -1.17
CAPN3-210ENST00000561817 WDR19Q8NEZ3 1342 aa7.74□□□□□ -1.17
CAPN3-210ENST00000561817 CHD4Q14839 1912 aa7.74□□□□□ -1.17
CAPN3-210ENST00000561817 PPEF1O14829 653 aaPredicted RBP7.73□□□□□ -1.17
CAPN3-210ENST00000561817 GFRA3O60609 400 aa7.73□□□□□ -1.17
CAPN3-210ENST00000561817 PFKFB2O60825 505 aa7.73□□□□□ -1.17
CAPN3-210ENST00000561817 BAG4O95429 457 aaKnown RBP7.73□□□□□ -1.17
CAPN3-210ENST00000561817 GNAT2P19087 354 aa7.73□□□□□ -1.17
CAPN3-210ENST00000561817 PRDX5P30044 214 aa7.73□□□□□ -1.17
CAPN3-210ENST00000561817 PDE6BP35913 854 aa7.73□□□□□ -1.17
CAPN3-210ENST00000561817 HAND2P61296 217 aa7.73□□□□□ -1.17
CAPN3-210ENST00000561817 MECOMQ03112 1051 aa7.73□□□□□ -1.17
CAPN3-210ENST00000561817 GRIK5Q16478 980 aa7.73□□□□□ -1.17
CAPN3-210ENST00000561817 IMMTQ16891 758 aaKnown RBP7.73□□□□□ -1.17
CAPN3-210ENST00000561817 CCDC83Q8IWF9 413 aa7.73□□□□□ -1.17
CAPN3-210ENST00000561817 NECAB1Q8N987 351 aa7.73□□□□□ -1.17
CAPN3-210ENST00000561817 AIDAQ96BJ3 306 aa7.73□□□□□ -1.17
CAPN3-210ENST00000561817 TMEM134Q9H6X4 195 aa7.73□□□□□ -1.17
CAPN3-210ENST00000561817 CD209Q9NNX6 404 aa7.73□□□□□ -1.17
CAPN3-210ENST00000561817 ANKIB1Q9P2G1 1089 aa7.73□□□□□ -1.17
CAPN3-210ENST00000561817 GGA1Q9UJY5 639 aa7.73□□□□□ -1.17
CAPN3-210ENST00000561817 PCDHB3Q9Y5E6 796 aa7.73□□□□□ -1.17
CAPN3-210ENST00000561817 ARFGEF1Q9Y6D6 1849 aa7.73□□□□□ -1.17
CAPN3-210ENST00000561817 C10orf71Q711Q0 1435 aa7.72□□□□□ -1.17
CAPN3-210ENST00000561817 ZNF213O14771 459 aa7.72□□□□□ -1.17
CAPN3-210ENST00000561817 UFL1O94874 794 aa7.72□□□□□ -1.17
CAPN3-210ENST00000561817 DYNLL1P63167 89 aaKnown RBP7.72□□□□□ -1.17
CAPN3-210ENST00000561817 IRF5Q13568 498 aa7.72□□□□□ -1.17
CAPN3-210ENST00000561817 STYK1Q6J9G0 422 aa7.72□□□□□ -1.17
CAPN3-210ENST00000561817 OLFM4Q6UX06 510 aa7.72□□□□□ -1.17
CAPN3-210ENST00000561817 CYB5R4Q7L1T6 521 aa7.72□□□□□ -1.17
CAPN3-210ENST00000561817 VPS37DQ86XT2 251 aa7.72□□□□□ -1.17
CAPN3-210ENST00000561817 MIGA1Q8NAN2 632 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms