RNA–Protein interactions for RNA: ENST00000561781.1

RAB40C-206, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 2,439 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-206ENST00000561781 ETAA1Q9NY74 926 aa21.17■□□□□ 0.98
RAB40C-206ENST00000561781 TRIM37O94972 964 aa21.17■□□□□ 0.98
RAB40C-206ENST00000561781 IRAK1P51617 712 aa21.17■□□□□ 0.98
RAB40C-206ENST00000561781 NMIQ13287 307 aaPredicted RBP21.17■□□□□ 0.98
RAB40C-206ENST00000561781 TMEM139Q8IV31 216 aa21.17■□□□□ 0.98
RAB40C-206ENST00000561781 IGSF22Q8N9C0 903 aa21.17■□□□□ 0.98
RAB40C-206ENST00000561781 PUF60Q9UHX1 559 aaKnown RBP21.17■□□□□ 0.98
RAB40C-206ENST00000561781 RTN2O75298 545 aa21.16■□□□□ 0.98
RAB40C-206ENST00000561781 KIAA0754O94854 1291 aa21.16■□□□□ 0.98
RAB40C-206ENST00000561781 ATP1A3P13637 1013 aa21.16■□□□□ 0.98
RAB40C-206ENST00000561781 B4GALNT4Q76KP1 1039 aa21.16■□□□□ 0.98
RAB40C-206ENST00000561781 ARMC2Q8NEN0 867 aa21.16■□□□□ 0.98
RAB40C-206ENST00000561781 TATDN2Q93075 761 aa21.16■□□□□ 0.98
RAB40C-206ENST00000561781 DOT1LQ8TEK3 1739 aa21.16■□□□□ 0.98
RAB40C-206ENST00000561781 BIN1O00499 593 aa21.16■□□□□ 0.98
RAB40C-206ENST00000561781 STX10O60499 249 aa21.16■□□□□ 0.98
RAB40C-206ENST00000561781 TOP1P11387 765 aaKnown RBP21.16■□□□□ 0.98
RAB40C-206ENST00000561781 ICA1Q05084 483 aa21.16■□□□□ 0.98
RAB40C-206ENST00000561781 FAM76AQ8TAV0 307 aa21.16■□□□□ 0.98
RAB40C-206ENST00000561781 EVI5LQ96CN4 794 aa21.16■□□□□ 0.98
RAB40C-206ENST00000561781 ECHDC1Q9NTX5 307 aa21.16■□□□□ 0.98
RAB40C-206ENST00000561781 SPATS2LQ9NUQ6 558 aaKnown RBP21.16■□□□□ 0.98
RAB40C-206ENST00000561781 A0A1B0GVL5 298 aa21.15■□□□□ 0.98
RAB40C-206ENST00000561781 IKBKBO14920 756 aa21.15■□□□□ 0.98
RAB40C-206ENST00000561781 RNMTO43148 476 aaKnown RBP21.15■□□□□ 0.98
RAB40C-206ENST00000561781 BCAS4Q8TDM0 211 aa21.15■□□□□ 0.98
RAB40C-206ENST00000561781 BAG1Q99933 345 aaPredicted RBP21.15■□□□□ 0.98
RAB40C-206ENST00000561781 N4BP2Q86UW6 1770 aaPredicted RBP21.15■□□□□ 0.98
RAB40C-206ENST00000561781 UBASH3AP57075 661 aa21.15■□□□□ 0.98
RAB40C-206ENST00000561781 WDR93Q6P2C0 686 aa21.15■□□□□ 0.98
RAB40C-206ENST00000561781 ANKRD18AQ8IVF6 992 aa21.15■□□□□ 0.98
RAB40C-206ENST00000561781 VSTM4Q8IW00 320 aa21.15■□□□□ 0.98
RAB40C-206ENST00000561781 ZNF483Q8TF39 744 aaPredicted RBP21.15■□□□□ 0.98
RAB40C-206ENST00000561781 MRPS27Q92552 414 aaKnown RBP21.15■□□□□ 0.98
RAB40C-206ENST00000561781 MYO1FO00160 1098 aa21.14■□□□□ 0.97
RAB40C-206ENST00000561781 ARHGAP25P42331 645 aa21.14■□□□□ 0.97
RAB40C-206ENST00000561781 OS9Q13438 667 aaPredicted RBP21.14■□□□□ 0.97
RAB40C-206ENST00000561781 OTUD6BQ8N6M0 293 aa21.14■□□□□ 0.97
RAB40C-206ENST00000561781 DPF2Q92785 391 aa21.14■□□□□ 0.97
RAB40C-206ENST00000561781 KAT14Q9H8E8 782 aa21.14■□□□□ 0.97
RAB40C-206ENST00000561781 PXDNLA1KZ92 1463 aa21.14■□□□□ 0.97
RAB40C-206ENST00000561781 ATL3Q6DD88 541 aa21.14■□□□□ 0.97
RAB40C-206ENST00000561781 NDUFA8P51970 172 aa21.13■□□□□ 0.97
RAB40C-206ENST00000561781 PPFIA1Q13136 1202 aa21.13■□□□□ 0.97
RAB40C-206ENST00000561781 PTPN21Q16825 1174 aa21.13■□□□□ 0.97
RAB40C-206ENST00000561781 DCAF5Q96JK2 942 aa21.13■□□□□ 0.97
RAB40C-206ENST00000561781 HSD3B7Q9H2F3 369 aa21.13■□□□□ 0.97
RAB40C-206ENST00000561781 RHOXF2BP0C7M4 288 aa21.13■□□□□ 0.97
RAB40C-206ENST00000561781 SLC39A6Q13433 755 aa21.13■□□□□ 0.97
RAB40C-206ENST00000561781 CLASRPQ8N2M8 674 aaKnown RBP21.13■□□□□ 0.97
RAB40C-206ENST00000561781 RHOXF2Q9BQY4 288 aa21.13■□□□□ 0.97
RAB40C-206ENST00000561781 PCDHA7Q9UN72 937 aa21.13■□□□□ 0.97
RAB40C-206ENST00000561781 NEDD4P46934 1319 aa21.12■□□□□ 0.97
RAB40C-206ENST00000561781 A0A0D9SFI3 127 aa21.12■□□□□ 0.97
RAB40C-206ENST00000561781 CCNHP51946 323 aaPredicted RBP21.12■□□□□ 0.97
RAB40C-206ENST00000561781 NKX1-1Q15270 411 aaPredicted RBP21.12■□□□□ 0.97
RAB40C-206ENST00000561781 HSP90AB4PQ58FF6 505 aa21.12■□□□□ 0.97
RAB40C-206ENST00000561781 ZNF396Q96N95 335 aaPredicted RBP21.12■□□□□ 0.97
RAB40C-206ENST00000561781 SIL1Q9H173 461 aa21.12■□□□□ 0.97
RAB40C-206ENST00000561781 KLC4Q9NSK0 619 aa21.12■□□□□ 0.97
RAB40C-206ENST00000561781 EIF3HO15372 352 aaKnown RBP eCLIP21.12■□□□□ 0.97
RAB40C-206ENST00000561781 SERPINC1P01008 464 aa21.12■□□□□ 0.97
RAB40C-206ENST00000561781 NBPF7P0C2Y1 421 aaPredicted RBP21.12■□□□□ 0.97
RAB40C-206ENST00000561781 MCM3P25205 808 aa21.12■□□□□ 0.97
RAB40C-206ENST00000561781 CLNS1AP54105 237 aaKnown RBP21.12■□□□□ 0.97
RAB40C-206ENST00000561781 NLRP12P59046 1061 aa21.12■□□□□ 0.97
RAB40C-206ENST00000561781 NAA16Q6N069 864 aaPredicted RBP21.12■□□□□ 0.97
RAB40C-206ENST00000561781 PIGBQ92521 554 aa21.12■□□□□ 0.97
RAB40C-206ENST00000561781 KCNQ4P56696 695 aa21.11■□□□□ 0.97
RAB40C-206ENST00000561781 CFAP100Q494V2 611 aa21.11■□□□□ 0.97
RAB40C-206ENST00000561781 CAPS2Q9BXY5 557 aa21.11■□□□□ 0.97
RAB40C-206ENST00000561781 CTAGE15A4D2H0 777 aa21.1■□□□□ 0.97
RAB40C-206ENST00000561781 A6NNZ2 444 aa21.1■□□□□ 0.97
RAB40C-206ENST00000561781 KCNQ3O43525 872 aa21.1■□□□□ 0.97
RAB40C-206ENST00000561781 MYO1BO43795 1136 aa21.1■□□□□ 0.97
RAB40C-206ENST00000561781 IPO7O95373 1038 aaKnown RBP21.1■□□□□ 0.97
RAB40C-206ENST00000561781 CTAGE8P0CG41 777 aa21.1■□□□□ 0.97
RAB40C-206ENST00000561781 SMTNP53814 917 aa21.1■□□□□ 0.97
RAB40C-206ENST00000561781 RWDD2BP57060 319 aa21.1■□□□□ 0.97
RAB40C-206ENST00000561781 TUBB8Q3ZCM7 444 aa21.1■□□□□ 0.97
RAB40C-206ENST00000561781 CEP85LQ5SZL2 805 aa21.1■□□□□ 0.97
RAB40C-206ENST00000561781 TOGARAM2Q6ZUX3 1019 aa21.1■□□□□ 0.97
RAB40C-206ENST00000561781 CTAGE6Q86UF2 777 aa21.1■□□□□ 0.97
RAB40C-206ENST00000561781 CTAGE4Q8IX94 777 aa21.1■□□□□ 0.97
RAB40C-206ENST00000561781 GPATCH3Q96I76 525 aa21.1■□□□□ 0.97
RAB40C-206ENST00000561781 MEFVO15553 781 aaPredicted RBP21.1■□□□□ 0.97
RAB40C-206ENST00000561781 PLCB4Q15147 1175 aa21.1■□□□□ 0.97
RAB40C-206ENST00000561781 SMARCC2Q8TAQ2 1214 aa21.1■□□□□ 0.97
RAB40C-206ENST00000561781 SNRKQ9NRH2 765 aa21.1■□□□□ 0.97
RAB40C-206ENST00000561781 HPCAL4Q9UM19 191 aa21.1■□□□□ 0.97
RAB40C-206ENST00000561781 CABP4P57796 275 aa21.09■□□□□ 0.97
RAB40C-206ENST00000561781 SF3B2Q13435 895 aaKnown RBP21.09■□□□□ 0.97
RAB40C-206ENST00000561781 FAM196AQ6ZSG2 479 aa21.09■□□□□ 0.97
RAB40C-206ENST00000561781 Q6ZUG5 572 aa21.09■□□□□ 0.97
RAB40C-206ENST00000561781 CEMIPQ8WUJ3 1361 aa21.09■□□□□ 0.97
RAB40C-206ENST00000561781 TMEM232C9JQI7 657 aa21.09■□□□□ 0.97
RAB40C-206ENST00000561781 HIP1O00291 1037 aa21.09■□□□□ 0.97
RAB40C-206ENST00000561781 ADALQ6DHV7 355 aa21.09■□□□□ 0.97
RAB40C-206ENST00000561781 YTHDF3Q7Z739 585 aaKnown RBP21.09■□□□□ 0.97
RAB40C-206ENST00000561781 CCDC50Q8IVM0 306 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms