RNA–Protein interactions for RNA: ENST00000561643.5

NEIL1-202, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 5

Gene NEIL1, Length 3,271 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-202ENST00000561643 MAP3K14Q99558 947 aa12.61□□□□□ -0.39
NEIL1-202ENST00000561643 ZKSCAN3Q9BRR0 538 aa12.61□□□□□ -0.39
NEIL1-202ENST00000561643 HPSEQ9Y251 543 aa12.61□□□□□ -0.39
NEIL1-202ENST00000561643 SLC4A4Q9Y6R1 1079 aa12.61□□□□□ -0.39
NEIL1-202ENST00000561643 ITGB4P16144 1822 aa12.61□□□□□ -0.39
NEIL1-202ENST00000561643 TNNT3P45378 269 aaPredicted RBP12.61□□□□□ -0.39
NEIL1-202ENST00000561643 ELF2Q15723 593 aa12.61□□□□□ -0.39
NEIL1-202ENST00000561643 NYAP1Q6ZVC0 841 aa12.61□□□□□ -0.39
NEIL1-202ENST00000561643 WASF1Q92558 559 aa12.61□□□□□ -0.39
NEIL1-202ENST00000561643 GSG1L2A8MUP6 293 aa12.6□□□□□ -0.39
NEIL1-202ENST00000561643 CUTAO60888 179 aa12.6□□□□□ -0.39
NEIL1-202ENST00000561643 FANCCQ00597 558 aa12.6□□□□□ -0.39
NEIL1-202ENST00000561643 RESP18Q5W5W9 173 aa12.6□□□□□ -0.39
NEIL1-202ENST00000561643 TRIM22Q8IYM9 498 aa12.6□□□□□ -0.39
NEIL1-202ENST00000561643 CCDC82Q8N4S0 544 aa12.6□□□□□ -0.39
NEIL1-202ENST00000561643 AK7Q96M32 723 aa12.6□□□□□ -0.39
NEIL1-202ENST00000561643 UTP14AQ9BVJ6 771 aaKnown RBP12.6□□□□□ -0.39
NEIL1-202ENST00000561643 ERICH2A1L162 156 aa12.6□□□□□ -0.39
NEIL1-202ENST00000561643 IKBKBO14920 756 aa12.6□□□□□ -0.39
NEIL1-202ENST00000561643 FMNL1O95466 1100 aaPredicted RBP12.6□□□□□ -0.39
NEIL1-202ENST00000561643 BCAMP50895 628 aa12.6□□□□□ -0.39
NEIL1-202ENST00000561643 LCORLQ8N3X6 602 aa12.6□□□□□ -0.39
NEIL1-202ENST00000561643 MIGA1Q8NAN2 632 aa12.6□□□□□ -0.39
NEIL1-202ENST00000561643 CNNM3Q8NE01 707 aa12.6□□□□□ -0.39
NEIL1-202ENST00000561643 LRP2BPQ9P2M1 347 aa12.6□□□□□ -0.39
NEIL1-202ENST00000561643 TUBE1Q9UJT0 475 aa12.6□□□□□ -0.39
NEIL1-202ENST00000561643 STK36Q9NRP7 1315 aa12.59□□□□□ -0.39
NEIL1-202ENST00000561643 IGHMBP2P38935 993 aaKnown RBP12.59□□□□□ -0.39
NEIL1-202ENST00000561643 WTAPQ15007 396 aa12.59□□□□□ -0.39
NEIL1-202ENST00000561643 RTN1Q16799 776 aa12.59□□□□□ -0.39
NEIL1-202ENST00000561643 OLFM4Q6UX06 510 aa12.59□□□□□ -0.39
NEIL1-202ENST00000561643 NOSTRINQ8IVI9 506 aa12.59□□□□□ -0.39
NEIL1-202ENST00000561643 FEZ2Q9UHY8 353 aaPredicted RBP12.59□□□□□ -0.39
NEIL1-202ENST00000561643 KCNH3Q9ULD8 1083 aa12.59□□□□□ -0.39
NEIL1-202ENST00000561643 ANKRD36CQ5JPF3 1778 aa12.59□□□□□ -0.39
NEIL1-202ENST00000561643 BTBD18B2RXH4 712 aa12.59□□□□□ -0.39
NEIL1-202ENST00000561643 SERPINC1P01008 464 aa12.59□□□□□ -0.39
NEIL1-202ENST00000561643 ATP1A3P13637 1013 aa12.59□□□□□ -0.39
NEIL1-202ENST00000561643 IFNAR1P17181 557 aa12.59□□□□□ -0.39
NEIL1-202ENST00000561643 GNAT2P19087 354 aa12.59□□□□□ -0.39
NEIL1-202ENST00000561643 ARMCX5Q6P1M9 558 aa12.59□□□□□ -0.39
NEIL1-202ENST00000561643 NOL10Q9BSC4 688 aaKnown RBP12.59□□□□□ -0.39
NEIL1-202ENST00000561643 KCNJ14Q9UNX9 436 aa12.59□□□□□ -0.39
NEIL1-202ENST00000561643 TACC3Q9Y6A5 838 aa12.59□□□□□ -0.39
NEIL1-202ENST00000561643 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.59□□□□□ -0.39
NEIL1-202ENST00000561643 NUP98P52948 1817 aa12.59□□□□□ -0.39
NEIL1-202ENST00000561643 GUCY1A2P33402 732 aa12.59□□□□□ -0.39
NEIL1-202ENST00000561643 MYL5Q02045 173 aa12.59□□□□□ -0.39
NEIL1-202ENST00000561643 CCDC152Q4G0S7 254 aa12.59□□□□□ -0.39
NEIL1-202ENST00000561643 DIS3L2Q8IYB7 885 aaKnown RBP12.59□□□□□ -0.39
NEIL1-202ENST00000561643 KRI1Q8N9T8 703 aaKnown RBP12.59□□□□□ -0.39
NEIL1-202ENST00000561643 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.59□□□□□ -0.39
NEIL1-202ENST00000561643 DISP2A7MBM2 1401 aa12.59□□□□□ -0.39
NEIL1-202ENST00000561643 EIF5P55010 431 aaKnown RBP12.58□□□□□ -0.4
NEIL1-202ENST00000561643 LONRF3Q496Y0 759 aa12.58□□□□□ -0.4
NEIL1-202ENST00000561643 SPECC1Q5M775 1068 aa12.58□□□□□ -0.4
NEIL1-202ENST00000561643 NUP133Q8WUM0 1156 aa12.58□□□□□ -0.4
NEIL1-202ENST00000561643 UBASH3AP57075 661 aa12.58□□□□□ -0.4
NEIL1-202ENST00000561643 DHX8Q14562 1220 aaKnown RBP12.58□□□□□ -0.4
NEIL1-202ENST00000561643 KRBA2Q6ZNG9 492 aa12.58□□□□□ -0.4
NEIL1-202ENST00000561643 METTL16Q86W50 562 aaKnown RBP12.58□□□□□ -0.4
NEIL1-202ENST00000561643 CMTR1Q8N1G2 835 aaKnown RBP12.58□□□□□ -0.4
NEIL1-202ENST00000561643 STAG1Q8WVM7 1258 aa12.58□□□□□ -0.4
NEIL1-202ENST00000561643 CCDC87Q9NVE4 849 aa12.58□□□□□ -0.4
NEIL1-202ENST00000561643 IQSEC3Q9UPP2 1182 aaPredicted RBP12.58□□□□□ -0.4
NEIL1-202ENST00000561643 FAM237AA0A1B0GTK4 181 aa12.57□□□□□ -0.4
NEIL1-202ENST00000561643 KIF2AO00139 706 aaPredicted RBP12.57□□□□□ -0.4
NEIL1-202ENST00000561643 MMP1P03956 469 aa12.57□□□□□ -0.4
NEIL1-202ENST00000561643 RAD51AP2Q09MP3 1159 aa12.57□□□□□ -0.4
NEIL1-202ENST00000561643 CFAP100Q494V2 611 aa12.57□□□□□ -0.4
NEIL1-202ENST00000561643 CBFA2T2O43439 604 aa12.57□□□□□ -0.4
NEIL1-202ENST00000561643 ATP6V1AP38606 617 aa12.57□□□□□ -0.4
NEIL1-202ENST00000561643 E4F1Q66K89 784 aaPredicted RBP12.57□□□□□ -0.4
NEIL1-202ENST00000561643 RNF41Q9H4P4 317 aaPredicted RBP12.57□□□□□ -0.4
NEIL1-202ENST00000561643 HOOK1Q9UJC3 728 aaKnown RBP12.57□□□□□ -0.4
NEIL1-202ENST00000561643 PCDHA5Q9Y5H7 936 aa12.57□□□□□ -0.4
NEIL1-202ENST00000561643 PNPLA7Q6ZV29 1317 aa12.57□□□□□ -0.4
NEIL1-202ENST00000561643 CCDC196A0A1B0GTZ2 297 aa12.57□□□□□ -0.4
NEIL1-202ENST00000561643 MINDY4BA8MYZ0 360 aa12.57□□□□□ -0.4
NEIL1-202ENST00000561643 ATP2B1P20020 1258 aa12.57□□□□□ -0.4
NEIL1-202ENST00000561643 UBAC1Q9BSL1 405 aa12.57□□□□□ -0.4
NEIL1-202ENST00000561643 KCND1Q9NSA2 647 aa12.57□□□□□ -0.4
NEIL1-202ENST00000561643 ZNF446Q9NWS9 450 aa12.57□□□□□ -0.4
NEIL1-202ENST00000561643 ABCF2Q9UG63 623 aa12.57□□□□□ -0.4
NEIL1-202ENST00000561643 LRP5O75197 1615 aa12.56□□□□□ -0.4
NEIL1-202ENST00000561643 DEXIO95424 95 aa12.56□□□□□ -0.4
NEIL1-202ENST00000561643 CYP7A1P22680 504 aa12.56□□□□□ -0.4
NEIL1-202ENST00000561643 CYP2C19P33261 490 aa12.56□□□□□ -0.4
NEIL1-202ENST00000561643 CRKLP46109 303 aaKnown RBP12.56□□□□□ -0.4
NEIL1-202ENST00000561643 INTS5Q6P9B9 1019 aaKnown RBP12.56□□□□□ -0.4
NEIL1-202ENST00000561643 HSD3B7Q9H2F3 369 aa12.56□□□□□ -0.4
NEIL1-202ENST00000561643 NIP7Q9Y221 180 aaKnown RBP eCLIP12.56□□□□□ -0.4
NEIL1-202ENST00000561643 SLIT2O94813 1529 aa12.56□□□□□ -0.4
NEIL1-202ENST00000561643 CHRNDQ07001 517 aa12.56□□□□□ -0.4
NEIL1-202ENST00000561643 PARP10Q53GL7 1025 aa12.56□□□□□ -0.4
NEIL1-202ENST00000561643 TMTC2Q8N394 836 aa12.56□□□□□ -0.4
NEIL1-202ENST00000561643 ACSBG1Q96GR2 724 aa12.56□□□□□ -0.4
NEIL1-202ENST00000561643 PPP1R13BQ96KQ4 1090 aa12.56□□□□□ -0.4
NEIL1-202ENST00000561643 FAM53CQ9NYF3 392 aa12.56□□□□□ -0.4
NEIL1-202ENST00000561643 TOB1P50616 345 aaPredicted RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms