RNA–Protein interactions for RNA: ENST00000561395.5

TPM1-231, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-231ENST00000561395 SPRYD3Q8NCJ5 442 aa8.94□□□□□ -0.98
TPM1-231ENST00000561395 LRP2BPQ9P2M1 347 aa8.94□□□□□ -0.98
TPM1-231ENST00000561395 CYP46A1Q9Y6A2 500 aa8.94□□□□□ -0.98
TPM1-231ENST00000561395 ZMYM6O95789 1325 aa8.94□□□□□ -0.98
TPM1-231ENST00000561395 PITPNM2Q9BZ72 1349 aa8.94□□□□□ -0.98
TPM1-231ENST00000561395 G3V3G9 751 aa8.93□□□□□ -0.98
TPM1-231ENST00000561395 H0YGN5 161 aa8.93□□□□□ -0.98
TPM1-231ENST00000561395 FRAT2O75474 233 aaPredicted RBP8.93□□□□□ -0.98
TPM1-231ENST00000561395 HSP90AA1P07900 732 aaKnown RBP8.93□□□□□ -0.98
TPM1-231ENST00000561395 CYP21A2P08686 494 aa8.93□□□□□ -0.98
TPM1-231ENST00000561395 CPA1P15085 419 aa8.93□□□□□ -0.98
TPM1-231ENST00000561395 RPS6KB1P23443 525 aa8.93□□□□□ -0.98
TPM1-231ENST00000561395 TTLL12Q14166 644 aaPredicted RBP8.93□□□□□ -0.98
TPM1-231ENST00000561395 DOK7Q18PE1 504 aa8.93□□□□□ -0.98
TPM1-231ENST00000561395 DCAF8Q5TAQ9 597 aa8.93□□□□□ -0.98
TPM1-231ENST00000561395 RUFY3Q7L099 469 aa8.93□□□□□ -0.98
TPM1-231ENST00000561395 TBC1D16Q8TBP0 767 aa8.93□□□□□ -0.98
TPM1-231ENST00000561395 ARMC5Q96C12 935 aa8.93□□□□□ -0.98
TPM1-231ENST00000561395 OTUD5Q96G74 571 aa8.93□□□□□ -0.98
TPM1-231ENST00000561395 STRBPQ96SI9 672 aaKnown RBP8.93□□□□□ -0.98
TPM1-231ENST00000561395 PDRG1Q9NUG6 133 aa8.93□□□□□ -0.98
TPM1-231ENST00000561395 ABCF2Q9UG63 623 aa8.93□□□□□ -0.98
TPM1-231ENST00000561395 CTNNA3Q9UI47 895 aa8.93□□□□□ -0.98
TPM1-231ENST00000561395 NSFL1CQ9UNZ2 370 aaKnown RBP8.93□□□□□ -0.98
TPM1-231ENST00000561395 SCAF8Q9UPN6 1271 aaKnown RBP8.93□□□□□ -0.98
TPM1-231ENST00000561395 SALL1Q9NSC2 1324 aa8.93□□□□□ -0.98
TPM1-231ENST00000561395 C6orf229H3BNL8 230 aa8.92□□□□□ -0.98
TPM1-231ENST00000561395 MBD4O95243 580 aa8.92□□□□□ -0.98
TPM1-231ENST00000561395 VIL1P09327 827 aaKnown RBP8.92□□□□□ -0.98
TPM1-231ENST00000561395 NUBP1P53384 320 aa8.92□□□□□ -0.98
TPM1-231ENST00000561395 AK2P54819 239 aa8.92□□□□□ -0.98
TPM1-231ENST00000561395 ZNF280AP59817 542 aaPredicted RBP8.92□□□□□ -0.98
TPM1-231ENST00000561395 CHAF1AQ13111 956 aaPredicted RBP8.92□□□□□ -0.98
TPM1-231ENST00000561395 CUL4AQ13619 759 aa8.92□□□□□ -0.98
TPM1-231ENST00000561395 ALX1Q15699 326 aa8.92□□□□□ -0.98
TPM1-231ENST00000561395 PRAMEF18Q5VWM3 479 aa8.92□□□□□ -0.98
TPM1-231ENST00000561395 TMED8Q6PL24 325 aaPredicted RBP8.92□□□□□ -0.98
TPM1-231ENST00000561395 BLOC1S2Q6QNY1 142 aa8.92□□□□□ -0.98
TPM1-231ENST00000561395 STOX1Q6ZVD7 989 aa8.92□□□□□ -0.98
TPM1-231ENST00000561395 TDRD7Q8NHU6 1098 aaKnown RBP8.92□□□□□ -0.98
TPM1-231ENST00000561395 ZNF384Q8TF68 577 aa8.92□□□□□ -0.98
TPM1-231ENST00000561395 TMX3Q96JJ7 454 aa8.92□□□□□ -0.98
TPM1-231ENST00000561395 ALDH8A1Q9H2A2 487 aaPredicted RBP8.92□□□□□ -0.98
TPM1-231ENST00000561395 RAI14Q9P0K7 980 aa8.92□□□□□ -0.98
TPM1-231ENST00000561395 POLLQ9UGP5 575 aa8.92□□□□□ -0.98
TPM1-231ENST00000561395 PTPN22Q9Y2R2 807 aa8.92□□□□□ -0.98
TPM1-231ENST00000561395 ALPK3Q96L96 1907 aa8.92□□□□□ -0.98
TPM1-231ENST00000561395 IGSF3O75054 1194 aa8.91□□□□□ -0.98
TPM1-231ENST00000561395 ALDH1A1P00352 501 aa8.91□□□□□ -0.98
TPM1-231ENST00000561395 FGAP02671 866 aa8.91□□□□□ -0.98
TPM1-231ENST00000561395 IL1R1P14778 569 aa8.91□□□□□ -0.98
TPM1-231ENST00000561395 GNAT2P19087 354 aa8.91□□□□□ -0.98
TPM1-231ENST00000561395 CYP7A1P22680 504 aa8.91□□□□□ -0.98
TPM1-231ENST00000561395 FXR2P51116 673 aaKnown RBP eCLIP8.91□□□□□ -0.98
TPM1-231ENST00000561395 COL9A3Q14050 684 aaPredicted RBP8.91□□□□□ -0.98
TPM1-231ENST00000561395 IMMTQ16891 758 aaKnown RBP8.91□□□□□ -0.98
TPM1-231ENST00000561395 SPTY2D1Q68D10 685 aaPredicted RBP8.91□□□□□ -0.98
TPM1-231ENST00000561395 TTLL5Q6EMB2 1281 aa8.91□□□□□ -0.98
TPM1-231ENST00000561395 NOL8Q76FK4 1167 aaKnown RBP8.91□□□□□ -0.98
TPM1-231ENST00000561395 ADGRA1Q86SQ6 560 aa8.91□□□□□ -0.98
TPM1-231ENST00000561395 LCORLQ8N3X6 602 aa8.91□□□□□ -0.98
TPM1-231ENST00000561395 ZGPATQ8N5A5 531 aaKnown RBP8.91□□□□□ -0.98
TPM1-231ENST00000561395 WDR66Q8TBY9 1149 aa8.91□□□□□ -0.98
TPM1-231ENST00000561395 CD99L2Q8TCZ2 262 aa8.91□□□□□ -0.98
TPM1-231ENST00000561395 NSUN4Q96CB9 384 aaKnown RBP8.91□□□□□ -0.98
TPM1-231ENST00000561395 ERO1AQ96HE7 468 aa8.91□□□□□ -0.98
TPM1-231ENST00000561395 NEK1Q96PY6 1258 aa8.91□□□□□ -0.98
TPM1-231ENST00000561395 EYA3Q99504 573 aa8.91□□□□□ -0.98
TPM1-231ENST00000561395 TMEM106CQ9BVX2 250 aa8.91□□□□□ -0.98
TPM1-231ENST00000561395 ARMT1Q9H993 441 aa8.91□□□□□ -0.98
TPM1-231ENST00000561395 EPB41L4AQ9HCS5 686 aaPredicted RBP8.91□□□□□ -0.98
TPM1-231ENST00000561395 CHMP5Q9NZZ3 219 aa8.91□□□□□ -0.98
TPM1-231ENST00000561395 LIMCH1Q9UPQ0 1083 aa8.91□□□□□ -0.98
TPM1-231ENST00000561395 MYH2Q9UKX2 1941 aa8.9□□□□□ -0.98
TPM1-231ENST00000561395 PATL2C9JE40 543 aaKnown RBP8.9□□□□□ -0.98
TPM1-231ENST00000561395 E7EWF7 191 aa8.9□□□□□ -0.98
TPM1-231ENST00000561395 HMGB1P09429 215 aaKnown RBP8.9□□□□□ -0.98
TPM1-231ENST00000561395 PRDX5P30044 214 aa8.9□□□□□ -0.98
TPM1-231ENST00000561395 NF2P35240 595 aa8.9□□□□□ -0.98
TPM1-231ENST00000561395 MECOMQ03112 1051 aa8.9□□□□□ -0.98
TPM1-231ENST00000561395 ANKRD1Q15327 319 aa8.9□□□□□ -0.98
TPM1-231ENST00000561395 NAA16Q6N069 864 aaPredicted RBP8.9□□□□□ -0.98
TPM1-231ENST00000561395 PIP4P2Q8N4L2 257 aa8.9□□□□□ -0.98
TPM1-231ENST00000561395 INTS4Q96HW7 963 aaKnown RBP8.9□□□□□ -0.98
TPM1-231ENST00000561395 RIOK1Q9BRS2 568 aaKnown RBP8.9□□□□□ -0.98
TPM1-231ENST00000561395 CD209Q9NNX6 404 aa8.9□□□□□ -0.98
TPM1-231ENST00000561395 MYOZ2Q9NPC6 264 aa8.9□□□□□ -0.98
TPM1-231ENST00000561395 RBM27Q9P2N5 1060 aaKnown RBP8.9□□□□□ -0.98
TPM1-231ENST00000561395 NAV1Q8NEY1 1877 aa8.89□□□□□ -0.99
TPM1-231ENST00000561395 CDK5RAP2Q96SN8 1893 aa8.89□□□□□ -0.99
TPM1-231ENST00000561395 FAM205AQ6ZU69 1335 aa8.89□□□□□ -0.99
TPM1-231ENST00000561395 MAGEB6P1A0A0J9YX57 407 aa8.89□□□□□ -0.99
TPM1-231ENST00000561395 GSG1L2A8MUP6 293 aa8.89□□□□□ -0.99
TPM1-231ENST00000561395 APPP05067 770 aa8.89□□□□□ -0.99
TPM1-231ENST00000561395 LDHBP07195 334 aaKnown RBP8.89□□□□□ -0.99
TPM1-231ENST00000561395 HAND2P61296 217 aa8.89□□□□□ -0.99
TPM1-231ENST00000561395 TOB2Q14106 344 aaPredicted RBP8.89□□□□□ -0.99
TPM1-231ENST00000561395 SPRYD7Q5W111 196 aa8.89□□□□□ -0.99
TPM1-231ENST00000561395 RSBN1LQ6PCB5 846 aaPredicted RBP8.89□□□□□ -0.99
TPM1-231ENST00000561395 IFNL1Q8IU54 200 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms