RNA–Protein interactions for RNA: ENST00000561367.1

KNSTRN-215, Transcript of kinetochore localized astrin (SPAG5) binding protein, human

TSL 2

Gene KNSTRN, Length 630 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KNSTRN-215	ENST00000561367	BTD	P43251	543 aa		11.9	□□□□□ -0.5
KNSTRN-215	ENST00000561367	TNNI2	P48788	182 aa		11.9	□□□□□ -0.5
KNSTRN-215	ENST00000561367	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	11.9	□□□□□ -0.5
KNSTRN-215	ENST00000561367	ZMYM1	Q5SVZ6	1142 aa		11.9	□□□□□ -0.5
KNSTRN-215	ENST00000561367	TYW1B	Q6NUM6	668 aa		11.9	□□□□□ -0.5
KNSTRN-215	ENST00000561367	SAMD7	Q7Z3H4	446 aa		11.9	□□□□□ -0.5
KNSTRN-215	ENST00000561367	DDX12P	Q92771	950 aa		11.9	□□□□□ -0.5
KNSTRN-215	ENST00000561367	AIDA	Q96BJ3	306 aa		11.9	□□□□□ -0.5
KNSTRN-215	ENST00000561367	PRMT6	Q96LA8	375 aa	Predicted RBP	11.9	□□□□□ -0.5
KNSTRN-215	ENST00000561367	IDI2	Q9BXS1	227 aa		11.9	□□□□□ -0.5
KNSTRN-215	ENST00000561367	SLC4A5	Q9BY07	1137 aa		11.9	□□□□□ -0.5
KNSTRN-215	ENST00000561367	PPP2R3B	Q9Y5P8	575 aa		11.9	□□□□□ -0.5
KNSTRN-215	ENST00000561367	MCMDC2	Q4G0Z9	681 aa		11.89	□□□□□ -0.51
KNSTRN-215	ENST00000561367	FAM83A	Q86UY5	434 aa		11.89	□□□□□ -0.51
KNSTRN-215	ENST00000561367	TRPM4	Q8TD43	1214 aa		11.89	□□□□□ -0.51
KNSTRN-215	ENST00000561367	DCPS	Q96C86	337 aa	Known RBP	11.89	□□□□□ -0.51
KNSTRN-215	ENST00000561367	DDRGK1	Q96HY6	314 aa		11.89	□□□□□ -0.51
KNSTRN-215	ENST00000561367	RIOK1	Q9BRS2	568 aa	Known RBP	11.89	□□□□□ -0.51
KNSTRN-215	ENST00000561367	CRNKL1	Q9BZJ0	848 aa	Known RBP	11.89	□□□□□ -0.51
KNSTRN-215	ENST00000561367	NMRK2	Q9NPI5	230 aa		11.89	□□□□□ -0.51
KNSTRN-215	ENST00000561367	MYH7	P12883	1935 aa		11.88	□□□□□ -0.51
KNSTRN-215	ENST00000561367	ENTPD3	O75355	529 aa		11.88	□□□□□ -0.51
KNSTRN-215	ENST00000561367	CDC45	O75419	566 aa		11.88	□□□□□ -0.51
KNSTRN-215	ENST00000561367	RHBDL3	P58872	404 aa		11.88	□□□□□ -0.51
KNSTRN-215	ENST00000561367	NBPF9	Q3BBW0	867 aa		11.88	□□□□□ -0.51
KNSTRN-215	ENST00000561367	RBM26	Q5T8P6	1007 aa	Known RBP	11.88	□□□□□ -0.51
KNSTRN-215	ENST00000561367	CDC42EP5	Q6NZY7	148 aa		11.88	□□□□□ -0.51
KNSTRN-215	ENST00000561367	GIMAP6	Q6P9H5	292 aa		11.88	□□□□□ -0.51
KNSTRN-215	ENST00000561367	ZNF784	Q8NCA9	323 aa	Predicted RBP	11.88	□□□□□ -0.51
KNSTRN-215	ENST00000561367	ZNF526	Q8TF50	670 aa	Predicted RBP	11.88	□□□□□ -0.51
KNSTRN-215	ENST00000561367	HOOK2	Q96ED9	719 aa		11.88	□□□□□ -0.51
KNSTRN-215	ENST00000561367	ATP8A2	Q9NTI2	1148 aa		11.88	□□□□□ -0.51
KNSTRN-215	ENST00000561367	USP40	Q9NVE5	1235 aa		11.88	□□□□□ -0.51
KNSTRN-215	ENST00000561367	WDR70	Q9NW82	654 aa		11.88	□□□□□ -0.51
KNSTRN-215	ENST00000561367	AATF	Q9NY61	560 aa	Known RBP eCLIP	11.88	□□□□□ -0.51
KNSTRN-215	ENST00000561367	ZNF70	Q9UC06	446 aa	Predicted RBP	11.88	□□□□□ -0.51
KNSTRN-215	ENST00000561367	COL2A1	P02458	1487 aa	Predicted RBP	11.88	□□□□□ -0.51
KNSTRN-215	ENST00000561367	SHTN1	A0MZ66	631 aa		11.87	□□□□□ -0.51
KNSTRN-215	ENST00000561367	BHMG1	C9JSJ3	638 aa	Predicted RBP	11.87	□□□□□ -0.51
KNSTRN-215	ENST00000561367	CHML	P26374	656 aa		11.87	□□□□□ -0.51
KNSTRN-215	ENST00000561367	HIRA	P54198	1017 aa	Predicted RBP	11.87	□□□□□ -0.51
KNSTRN-215	ENST00000561367	EAPP	Q56P03	285 aa	Predicted RBP	11.87	□□□□□ -0.51
KNSTRN-215	ENST00000561367	CDC37L1	Q7L3B6	337 aa		11.87	□□□□□ -0.51
KNSTRN-215	ENST00000561367	ADGRA1	Q86SQ6	560 aa		11.87	□□□□□ -0.51
KNSTRN-215	ENST00000561367	SULF1	Q8IWU6	871 aa		11.87	□□□□□ -0.51
KNSTRN-215	ENST00000561367	TEX11	Q8IYF3	940 aa		11.87	□□□□□ -0.51
KNSTRN-215	ENST00000561367	OSBP2	Q969R2	916 aa		11.87	□□□□□ -0.51
KNSTRN-215	ENST00000561367	PUS7L	Q9H0K6	701 aa	Known RBP	11.87	□□□□□ -0.51
KNSTRN-215	ENST00000561367	TDRD3	Q9H7E2	651 aa	Known RBP	11.87	□□□□□ -0.51
KNSTRN-215	ENST00000561367	GGA3	Q9NZ52	723 aa		11.87	□□□□□ -0.51
KNSTRN-215	ENST00000561367	ARIH1	Q9Y4X5	557 aa	Predicted RBP	11.87	□□□□□ -0.51
KNSTRN-215	ENST00000561367	MYH2	Q9UKX2	1941 aa		11.87	□□□□□ -0.51
KNSTRN-215	ENST00000561367	ECM29	Q5VYK3	1845 aa		11.86	□□□□□ -0.51
KNSTRN-215	ENST00000561367	GPAA1	O43292	621 aa		11.86	□□□□□ -0.51
KNSTRN-215	ENST00000561367	TOMM70	O94826	608 aa		11.86	□□□□□ -0.51
KNSTRN-215	ENST00000561367	MBD4	O95243	580 aa		11.86	□□□□□ -0.51
KNSTRN-215	ENST00000561367	EGFR	P00533	1210 aa		11.86	□□□□□ -0.51
KNSTRN-215	ENST00000561367	ANGEL2	Q5VTE6	544 aa	Known RBP	11.86	□□□□□ -0.51
KNSTRN-215	ENST00000561367	AMOTL1	Q8IY63	956 aa		11.86	□□□□□ -0.51
KNSTRN-215	ENST00000561367	MIGA1	Q8NAN2	632 aa		11.86	□□□□□ -0.51
KNSTRN-215	ENST00000561367	RBM46	Q8TBY0	533 aa	Known RBP	11.86	□□□□□ -0.51
KNSTRN-215	ENST00000561367	FAM151A	Q8WW52	585 aa		11.86	□□□□□ -0.51
KNSTRN-215	ENST00000561367	STRBP	Q96SI9	672 aa	Known RBP	11.86	□□□□□ -0.51
KNSTRN-215	ENST00000561367	NACAP1	Q9BZK3	213 aa		11.86	□□□□□ -0.51
KNSTRN-215	ENST00000561367	DHX36	Q9H2U1	1008 aa	Known RBP	11.86	□□□□□ -0.51
KNSTRN-215	ENST00000561367	ADAMTSL1	Q8N6G6	1762 aa		11.86	□□□□□ -0.51
KNSTRN-215	ENST00000561367	AK9	Q5TCS8	1911 aa		11.86	□□□□□ -0.51
KNSTRN-215	ENST00000561367	CCDC171	Q6TFL3	1326 aa		11.86	□□□□□ -0.51
KNSTRN-215	ENST00000561367	PPP1R3G	B7ZBB8	358 aa		11.85	□□□□□ -0.51
KNSTRN-215	ENST00000561367	EPB41L2	O43491	1005 aa	Known RBP	11.85	□□□□□ -0.51
KNSTRN-215	ENST00000561367	WDHD1	O75717	1129 aa	Predicted RBP	11.85	□□□□□ -0.51
KNSTRN-215	ENST00000561367	USP5	P45974	858 aa		11.85	□□□□□ -0.51
KNSTRN-215	ENST00000561367	FSTL1	Q12841	308 aa		11.85	□□□□□ -0.51
KNSTRN-215	ENST00000561367	NMI	Q13287	307 aa	Predicted RBP	11.85	□□□□□ -0.51
KNSTRN-215	ENST00000561367	PROX2	Q3B8N5	592 aa		11.85	□□□□□ -0.51
KNSTRN-215	ENST00000561367	CWC27	Q6UX04	472 aa	Known RBP	11.85	□□□□□ -0.51
KNSTRN-215	ENST00000561367	SKAP1	Q86WV1	359 aa		11.85	□□□□□ -0.51
KNSTRN-215	ENST00000561367	SMC1B	Q8NDV3	1235 aa		11.85	□□□□□ -0.51
KNSTRN-215	ENST00000561367	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	11.85	□□□□□ -0.51
KNSTRN-215	ENST00000561367	VEZT	Q9HBM0	779 aa		11.85	□□□□□ -0.51
KNSTRN-215	ENST00000561367	MYO5A	Q9Y4I1	1855 aa	Known RBP	11.85	□□□□□ -0.51
KNSTRN-215	ENST00000561367	ZMYM6	O95789	1325 aa		11.85	□□□□□ -0.51
KNSTRN-215	ENST00000561367	ATRNL1	Q5VV63	1379 aa		11.84	□□□□□ -0.51
KNSTRN-215	ENST00000561367		A0A0D9SFI3	127 aa		11.84	□□□□□ -0.51
KNSTRN-215	ENST00000561367	CLRN2	A0PK11	232 aa		11.84	□□□□□ -0.51
KNSTRN-215	ENST00000561367	PATL2	C9JE40	543 aa	Known RBP	11.84	□□□□□ -0.51
KNSTRN-215	ENST00000561367	SGSM2	O43147	1006 aa		11.84	□□□□□ -0.51
KNSTRN-215	ENST00000561367	DYNLL1	P63167	89 aa	Known RBP	11.84	□□□□□ -0.51
KNSTRN-215	ENST00000561367	SUPT20HL1	Q3ZLR7	823 aa		11.84	□□□□□ -0.51
KNSTRN-215	ENST00000561367	KRT26	Q7Z3Y9	468 aa		11.84	□□□□□ -0.51
KNSTRN-215	ENST00000561367	LCORL	Q8N3X6	602 aa		11.84	□□□□□ -0.51
KNSTRN-215	ENST00000561367	FAM227B	Q96M60	508 aa		11.84	□□□□□ -0.51
KNSTRN-215	ENST00000561367	DEFB129	Q9H1M3	183 aa		11.84	□□□□□ -0.51
KNSTRN-215	ENST00000561367	ARMT1	Q9H993	441 aa		11.84	□□□□□ -0.51
KNSTRN-215	ENST00000561367	PCDHAC2	Q9Y5I4	1007 aa		11.84	□□□□□ -0.51
KNSTRN-215	ENST00000561367	SLC4A4	Q9Y6R1	1079 aa		11.84	□□□□□ -0.51
KNSTRN-215	ENST00000561367	FLT1	P17948	1338 aa		11.84	□□□□□ -0.51
KNSTRN-215	ENST00000561367		M0R2C6	588 aa		11.83	□□□□□ -0.52
KNSTRN-215	ENST00000561367	NF2	P35240	595 aa		11.83	□□□□□ -0.52
KNSTRN-215	ENST00000561367	RASA3	Q14644	834 aa		11.83	□□□□□ -0.52

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