RNA–Protein interactions for RNA: ENST00000561304.5

ZEB1-223, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,383 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-223ENST00000561304 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.17□□□□□ -0.94
ZEB1-223ENST00000561304 ZNF384Q8TF68 577 aa9.17□□□□□ -0.94
ZEB1-223ENST00000561304 ZNF296Q8WUU4 475 aaPredicted RBP9.17□□□□□ -0.94
ZEB1-223ENST00000561304 MRIQ9BWK5 157 aa9.17□□□□□ -0.94
ZEB1-223ENST00000561304 DENND2AQ9ULE3 1009 aa9.17□□□□□ -0.94
ZEB1-223ENST00000561304 HDAC5Q9UQL6 1122 aa9.17□□□□□ -0.94
ZEB1-223ENST00000561304 VPS9D1Q9Y2B5 631 aa9.17□□□□□ -0.94
ZEB1-223ENST00000561304 MYH7P12883 1935 aa9.17□□□□□ -0.94
ZEB1-223ENST00000561304 PDS5AQ29RF7 1337 aaKnown RBP9.16□□□□□ -0.94
ZEB1-223ENST00000561304 SEMA3EO15041 775 aa9.16□□□□□ -0.94
ZEB1-223ENST00000561304 LDHBP07195 334 aaKnown RBP9.16□□□□□ -0.94
ZEB1-223ENST00000561304 ZBTB48P10074 688 aaPredicted RBP9.16□□□□□ -0.94
ZEB1-223ENST00000561304 OSBPP22059 807 aa9.16□□□□□ -0.94
ZEB1-223ENST00000561304 FAM83AQ86UY5 434 aa9.16□□□□□ -0.94
ZEB1-223ENST00000561304 ITPRIPQ8IWB1 547 aa9.16□□□□□ -0.94
ZEB1-223ENST00000561304 ZFPM1Q8IX07 1006 aa9.16□□□□□ -0.94
ZEB1-223ENST00000561304 PANK1Q8TE04 598 aa9.16□□□□□ -0.94
ZEB1-223ENST00000561304 SSH3Q8TE77 659 aa9.16□□□□□ -0.94
ZEB1-223ENST00000561304 OPTNQ96CV9 577 aa9.16□□□□□ -0.94
ZEB1-223ENST00000561304 PTPN18Q99952 460 aa9.16□□□□□ -0.94
ZEB1-223ENST00000561304 ZBED2Q9BTP6 218 aa9.16□□□□□ -0.94
ZEB1-223ENST00000561304 GNL3LQ9NVN8 582 aaKnown RBP9.16□□□□□ -0.94
ZEB1-223ENST00000561304 FAM198AQ9UFP1 575 aa9.16□□□□□ -0.94
ZEB1-223ENST00000561304 SNCAIPQ9Y6H5 919 aa9.16□□□□□ -0.94
ZEB1-223ENST00000561304 ATRNL1Q5VV63 1379 aa9.16□□□□□ -0.94
ZEB1-223ENST00000561304 GAKO14976 1311 aa9.15□□□□□ -0.94
ZEB1-223ENST00000561304 MANSC4A6NHS7 340 aaPredicted RBP9.15□□□□□ -0.94
ZEB1-223ENST00000561304 GPR25O00155 361 aa9.15□□□□□ -0.94
ZEB1-223ENST00000561304 ZBTB7BO15156 539 aaPredicted RBP9.15□□□□□ -0.94
ZEB1-223ENST00000561304 MAP3K7O43318 606 aa9.15□□□□□ -0.94
ZEB1-223ENST00000561304 HRO43593 1189 aa9.15□□□□□ -0.94
ZEB1-223ENST00000561304 SLURP2P0DP57 97 aa9.15□□□□□ -0.94
ZEB1-223ENST00000561304 CAP1Q01518 475 aa9.15□□□□□ -0.94
ZEB1-223ENST00000561304 TCP10Q12799 353 aa9.15□□□□□ -0.94
ZEB1-223ENST00000561304 FKBP1CQ5VVH2 108 aa9.15□□□□□ -0.94
ZEB1-223ENST00000561304 CTU1Q7Z7A3 348 aaKnown RBP9.15□□□□□ -0.94
ZEB1-223ENST00000561304 FTSJ3Q8IY81 847 aaKnown RBP9.15□□□□□ -0.94
ZEB1-223ENST00000561304 ZKSCAN4Q969J2 545 aaPredicted RBP9.15□□□□□ -0.94
ZEB1-223ENST00000561304 NEUROD6Q96NK8 337 aa9.15□□□□□ -0.94
ZEB1-223ENST00000561304 CFHR5Q9BXR6 569 aa9.15□□□□□ -0.94
ZEB1-223ENST00000561304 TMOD2Q9NZR1 351 aa9.15□□□□□ -0.94
ZEB1-223ENST00000561304 HMG20BQ9P0W2 317 aa9.15□□□□□ -0.94
ZEB1-223ENST00000561304 LOC285556D6RIA3 1793 aa9.15□□□□□ -0.94
ZEB1-223ENST00000561304 DDX60LQ5H9U9 1706 aaKnown RBP9.15□□□□□ -0.94
ZEB1-223ENST00000561304 NAV1Q8NEY1 1877 aa9.15□□□□□ -0.94
ZEB1-223ENST00000561304 TESPA1A2RU30 521 aaPredicted RBP9.14□□□□□ -0.95
ZEB1-223ENST00000561304 UNCXA6NJT0 531 aa9.14□□□□□ -0.95
ZEB1-223ENST00000561304 ARID4AP29374 1257 aaPredicted RBP9.14□□□□□ -0.95
ZEB1-223ENST00000561304 INPP5BP32019 993 aa9.14□□□□□ -0.95
ZEB1-223ENST00000561304 MCAMP43121 646 aa9.14□□□□□ -0.95
ZEB1-223ENST00000561304 ATP8B2P98198 1209 aa9.14□□□□□ -0.95
ZEB1-223ENST00000561304 MVPQ14764 893 aaKnown RBP9.14□□□□□ -0.95
ZEB1-223ENST00000561304 TBC1D9Q6ZT07 1266 aa9.14□□□□□ -0.95
ZEB1-223ENST00000561304 MIGA2Q7L4E1 593 aa9.14□□□□□ -0.95
ZEB1-223ENST00000561304 BRI3BPQ8WY22 251 aa9.14□□□□□ -0.95
ZEB1-223ENST00000561304 WRNIP1Q96S55 665 aa9.14□□□□□ -0.95
ZEB1-223ENST00000561304 DDX4Q9NQI0 724 aaKnown RBP9.14□□□□□ -0.95
ZEB1-223ENST00000561304 ABCF2Q9UG63 623 aa9.14□□□□□ -0.95
ZEB1-223ENST00000561304 AKAP2Q9Y2D5 859 aa9.14□□□□□ -0.95
ZEB1-223ENST00000561304 MROH7-TTC4A0A0A0MT08 1334 aa9.14□□□□□ -0.95
ZEB1-223ENST00000561304 SPDYE5A6NIY4 337 aa9.13□□□□□ -0.95
ZEB1-223ENST00000561304 COL9A1P20849 921 aa9.13□□□□□ -0.95
ZEB1-223ENST00000561304 RGS3P49796 1198 aa9.13□□□□□ -0.95
ZEB1-223ENST00000561304 MECOMQ03112 1051 aa9.13□□□□□ -0.95
ZEB1-223ENST00000561304 G3BP1Q13283 466 aaKnown RBP eCLIP9.13□□□□□ -0.95
ZEB1-223ENST00000561304 CRHR2Q13324 411 aa9.13□□□□□ -0.95
ZEB1-223ENST00000561304 TNNI3KQ59H18 835 aa9.13□□□□□ -0.95
ZEB1-223ENST00000561304 NOM1Q5C9Z4 860 aaKnown RBP9.13□□□□□ -0.95
ZEB1-223ENST00000561304 CEP85Q6P2H3 762 aa9.13□□□□□ -0.95
ZEB1-223ENST00000561304 SH3BP5LQ7L8J4 393 aa9.13□□□□□ -0.95
ZEB1-223ENST00000561304 DZIP1Q86YF9 867 aaKnown RBP9.13□□□□□ -0.95
ZEB1-223ENST00000561304 FAM151AQ8WW52 585 aa9.13□□□□□ -0.95
ZEB1-223ENST00000561304 DBNDD2Q9BQY9 259 aa9.13□□□□□ -0.95
ZEB1-223ENST00000561304 USP40Q9NVE5 1235 aa9.13□□□□□ -0.95
ZEB1-223ENST00000561304 TLR7Q9NYK1 1049 aaKnown RBP9.13□□□□□ -0.95
ZEB1-223ENST00000561304 FPGT-TNNI3KV9GXZ4 949 aa9.13□□□□□ -0.95
ZEB1-223ENST00000561304 MYH8P13535 1937 aa9.13□□□□□ -0.95
ZEB1-223ENST00000561304 FKTNO75072 461 aa9.12□□□□□ -0.95
ZEB1-223ENST00000561304 WDHD1O75717 1129 aaPredicted RBP9.12□□□□□ -0.95
ZEB1-223ENST00000561304 BTDP43251 543 aa9.12□□□□□ -0.95
ZEB1-223ENST00000561304 FAM43AQ8N2R8 423 aa9.12□□□□□ -0.95
ZEB1-223ENST00000561304 ZGPATQ8N5A5 531 aaKnown RBP9.12□□□□□ -0.95
ZEB1-223ENST00000561304 SPATA5Q8NB90 893 aa9.12□□□□□ -0.95
ZEB1-223ENST00000561304 CSADQ9Y600 493 aa9.12□□□□□ -0.95
ZEB1-223ENST00000561304 DOCK3Q8IZD9 2030 aa9.12□□□□□ -0.95
ZEB1-223ENST00000561304 CCL15-CCL14A0A0B4J2E2 113 aa9.12□□□□□ -0.95
ZEB1-223ENST00000561304 DDTLA6NHG4 134 aaPredicted RBP9.12□□□□□ -0.95
ZEB1-223ENST00000561304 IRF6O14896 467 aa9.12□□□□□ -0.95
ZEB1-223ENST00000561304 SURF6O75683 361 aaKnown RBP9.12□□□□□ -0.95
ZEB1-223ENST00000561304 ALDH1A1P00352 501 aa9.12□□□□□ -0.95
ZEB1-223ENST00000561304 MLLT3P42568 568 aaPredicted RBP9.12□□□□□ -0.95
ZEB1-223ENST00000561304 SOX10P56693 466 aa9.12□□□□□ -0.95
ZEB1-223ENST00000561304 INHBEP58166 350 aa9.12□□□□□ -0.95
ZEB1-223ENST00000561304 RHBDL3P58872 404 aa9.12□□□□□ -0.95
ZEB1-223ENST00000561304 PICALMQ13492 652 aa9.12□□□□□ -0.95
ZEB1-223ENST00000561304 CCL15Q16663 113 aa9.12□□□□□ -0.95
ZEB1-223ENST00000561304 TSR1Q2NL82 804 aaKnown RBP9.12□□□□□ -0.95
ZEB1-223ENST00000561304 GORABQ5T7V8 394 aa9.12□□□□□ -0.95
ZEB1-223ENST00000561304 ERICH6Q7L0X2 663 aa9.12□□□□□ -0.95
ZEB1-223ENST00000561304 NSUN4Q96CB9 384 aaKnown RBP9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms