RNA–Protein interactions for RNA: ENST00000560997.1

SNX22-206, Transcript of sorting nexin 22, humanhuman

TSL 1 (best)

Gene SNX22, Length 3,367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX22-206ENST00000560997 CNNM3Q8NE01 707 aa11.27□□□□□ -0.61
SNX22-206ENST00000560997 STAG1Q8WVM7 1258 aa11.27□□□□□ -0.61
SNX22-206ENST00000560997 KRT23Q9C075 422 aa11.27□□□□□ -0.61
SNX22-206ENST00000560997 CNNM2Q9H8M5 875 aa11.27□□□□□ -0.61
SNX22-206ENST00000560997 KCND1Q9NSA2 647 aa11.27□□□□□ -0.61
SNX22-206ENST00000560997 MYL5Q02045 173 aa11.27□□□□□ -0.61
SNX22-206ENST00000560997 GOLGA8FQ08AF8 430 aa11.27□□□□□ -0.61
SNX22-206ENST00000560997 GOLGA8DPQ0D2H9 430 aa11.27□□□□□ -0.61
SNX22-206ENST00000560997 NR5A1Q13285 461 aa11.27□□□□□ -0.61
SNX22-206ENST00000560997 WTAPQ15007 396 aa11.27□□□□□ -0.61
SNX22-206ENST00000560997 ADGRA1Q86SQ6 560 aa11.27□□□□□ -0.61
SNX22-206ENST00000560997 UTP14AQ9BVJ6 771 aaKnown RBP11.27□□□□□ -0.61
SNX22-206ENST00000560997 HSP90AA4PQ58FG1 418 aa11.26□□□□□ -0.61
SNX22-206ENST00000560997 KRI1Q8N9T8 703 aaKnown RBP11.26□□□□□ -0.61
SNX22-206ENST00000560997 BCORQ6W2J9 1755 aa11.26□□□□□ -0.61
SNX22-206ENST00000560997 WTIPA6NIX2 430 aaPredicted RBP11.26□□□□□ -0.61
SNX22-206ENST00000560997 TMEM232C9JQI7 657 aa11.26□□□□□ -0.61
SNX22-206ENST00000560997 CRKLP46109 303 aaKnown RBP11.26□□□□□ -0.61
SNX22-206ENST00000560997 UBASH3AP57075 661 aa11.26□□□□□ -0.61
SNX22-206ENST00000560997 NUP133Q8WUM0 1156 aa11.26□□□□□ -0.61
SNX22-206ENST00000560997 SDR42E1Q8WUS8 393 aa11.26□□□□□ -0.61
SNX22-206ENST00000560997 ACSBG1Q96GR2 724 aa11.26□□□□□ -0.61
SNX22-206ENST00000560997 LRP2BPQ9P2M1 347 aa11.26□□□□□ -0.61
SNX22-206ENST00000560997 SERPINC1P01008 464 aa11.25□□□□□ -0.61
SNX22-206ENST00000560997 KIF18AQ8NI77 898 aa11.25□□□□□ -0.61
SNX22-206ENST00000560997 OXER1Q8TDS5 423 aa11.25□□□□□ -0.61
SNX22-206ENST00000560997 CCDC87Q9NVE4 849 aa11.25□□□□□ -0.61
SNX22-206ENST00000560997 FANCLQ9NW38 375 aa11.25□□□□□ -0.61
SNX22-206ENST00000560997 PCDHB6Q9Y5E3 794 aa11.25□□□□□ -0.61
SNX22-206ENST00000560997 NID2Q14112 1375 aa11.25□□□□□ -0.61
SNX22-206ENST00000560997 PNPLA7Q6ZV29 1317 aa11.25□□□□□ -0.61
SNX22-206ENST00000560997 CAMTA2O94983 1202 aa11.25□□□□□ -0.61
SNX22-206ENST00000560997 PRR29P0C7W0 189 aa11.25□□□□□ -0.61
SNX22-206ENST00000560997 ATP2B1P20020 1258 aa11.25□□□□□ -0.61
SNX22-206ENST00000560997 CHRNDQ07001 517 aa11.25□□□□□ -0.61
SNX22-206ENST00000560997 CFAP100Q494V2 611 aa11.25□□□□□ -0.61
SNX22-206ENST00000560997 GRAMD1CQ8IYS0 662 aa11.25□□□□□ -0.61
SNX22-206ENST00000560997 AK7Q96M32 723 aa11.25□□□□□ -0.61
SNX22-206ENST00000560997 NACAP1Q9BZK3 213 aa11.25□□□□□ -0.61
SNX22-206ENST00000560997 FBXO2Q9UK22 296 aaPredicted RBP11.25□□□□□ -0.61
SNX22-206ENST00000560997 PHLPP1O60346 1717 aa11.25□□□□□ -0.61
SNX22-206ENST00000560997 MDM2Q00987 491 aaPredicted RBP11.25□□□□□ -0.61
SNX22-206ENST00000560997 TRIM22Q8IYM9 498 aa11.25□□□□□ -0.61
SNX22-206ENST00000560997 CRACR2BQ8N4Y2 399 aaPredicted RBP11.25□□□□□ -0.61
SNX22-206ENST00000560997 WASF1Q92558 559 aa11.25□□□□□ -0.61
SNX22-206ENST00000560997 SHISA4Q96DD7 197 aa11.25□□□□□ -0.61
SNX22-206ENST00000560997 MYH14Q7Z406 1995 aaKnown RBP11.24□□□□□ -0.61
SNX22-206ENST00000560997 MINDY4BA8MYZ0 360 aa11.24□□□□□ -0.61
SNX22-206ENST00000560997 NTSR2O95665 410 aa11.24□□□□□ -0.61
SNX22-206ENST00000560997 ZSCAN20P17040 1043 aaPredicted RBP11.24□□□□□ -0.61
SNX22-206ENST00000560997 CYP7A1P22680 504 aa11.24□□□□□ -0.61
SNX22-206ENST00000560997 ATP6V1AP38606 617 aa11.24□□□□□ -0.61
SNX22-206ENST00000560997 IGHMBP2P38935 993 aaKnown RBP11.24□□□□□ -0.61
SNX22-206ENST00000560997 PPARAQ07869 468 aa11.24□□□□□ -0.61
SNX22-206ENST00000560997 SART3Q15020 963 aaKnown RBP11.24□□□□□ -0.61
SNX22-206ENST00000560997 SAFBQ15424 915 aaKnown RBP eCLIP11.24□□□□□ -0.61
SNX22-206ENST00000560997 ZNF827Q17R98 1081 aa11.24□□□□□ -0.61
SNX22-206ENST00000560997 CCDC152Q4G0S7 254 aa11.24□□□□□ -0.61
SNX22-206ENST00000560997 OLFM4Q6UX06 510 aa11.24□□□□□ -0.61
SNX22-206ENST00000560997 SYT10Q6XYQ8 523 aa11.24□□□□□ -0.61
SNX22-206ENST00000560997 ZNF654Q8IZM8 581 aa11.24□□□□□ -0.61
SNX22-206ENST00000560997 INTS13Q9NVM9 706 aa11.24□□□□□ -0.61
SNX22-206ENST00000560997 ABCF2Q9UG63 623 aa11.24□□□□□ -0.61
SNX22-206ENST00000560997 NIP7Q9Y221 180 aaKnown RBP eCLIP11.24□□□□□ -0.61
SNX22-206ENST00000560997 COL14A1Q05707 1796 aaKnown RBP11.24□□□□□ -0.61
SNX22-206ENST00000560997 POLR2DO15514 142 aaKnown RBP11.24□□□□□ -0.61
SNX22-206ENST00000560997 GNAT2P19087 354 aa11.24□□□□□ -0.61
SNX22-206ENST00000560997 USP49Q70CQ1 688 aa11.24□□□□□ -0.61
SNX22-206ENST00000560997 SERTAD1Q9UHV2 236 aa11.24□□□□□ -0.61
SNX22-206ENST00000560997 ERICH2A1L162 156 aa11.24□□□□□ -0.61
SNX22-206ENST00000560997 FAM205CA6NFA0 338 aa11.24□□□□□ -0.61
SNX22-206ENST00000560997 PTPREP23469 700 aa11.24□□□□□ -0.61
SNX22-206ENST00000560997 ITPK1Q13572 414 aa11.24□□□□□ -0.61
SNX22-206ENST00000560997 ELF2Q15723 593 aa11.24□□□□□ -0.61
SNX22-206ENST00000560997 PDILTQ8N807 584 aa11.24□□□□□ -0.61
SNX22-206ENST00000560997 FANCBQ8NB91 859 aa11.24□□□□□ -0.61
SNX22-206ENST00000560997 LRRN4CLQ8ND94 238 aa11.24□□□□□ -0.61
SNX22-206ENST00000560997 MAN1B1Q9UKM7 699 aa11.24□□□□□ -0.61
SNX22-206ENST00000560997 MYH6P13533 1939 aa11.23□□□□□ -0.61
SNX22-206ENST00000560997 PLCH1Q4KWH8 1693 aa11.23□□□□□ -0.61
SNX22-206ENST00000560997 hCG_1642624A0A1W2PR95 340 aa11.23□□□□□ -0.61
SNX22-206ENST00000560997 PSDA5PKW4 1024 aaPredicted RBP11.23□□□□□ -0.61
SNX22-206ENST00000560997 DEXIO95424 95 aa11.23□□□□□ -0.61
SNX22-206ENST00000560997 GYG1P46976 350 aa11.23□□□□□ -0.61
SNX22-206ENST00000560997 FMR1Q06787 632 aaKnown RBP eCLIP11.23□□□□□ -0.61
SNX22-206ENST00000560997 VSTM4Q8IW00 320 aa11.23□□□□□ -0.61
SNX22-206ENST00000560997 FOXP1Q9H334 677 aaPredicted RBP11.23□□□□□ -0.61
SNX22-206ENST00000560997 CGNQ9P2M7 1197 aaKnown RBP11.23□□□□□ -0.61
SNX22-206ENST00000560997 PRDM4Q9UKN5 801 aa11.23□□□□□ -0.61
SNX22-206ENST00000560997 BCL9LQ86UU0 1499 aa11.23□□□□□ -0.61
SNX22-206ENST00000560997 TAF1P21675 1872 aa11.23□□□□□ -0.61
SNX22-206ENST00000560997 CICQ96RK0 1608 aaPredicted RBP11.23□□□□□ -0.61
SNX22-206ENST00000560997 CYP2D7A0A087X1C5 515 aa11.23□□□□□ -0.61
SNX22-206ENST00000560997 POSTNQ15063 836 aa11.23□□□□□ -0.61
SNX22-206ENST00000560997 MYH2Q9UKX2 1941 aa11.23□□□□□ -0.61
SNX22-206ENST00000560997 COL1A1P02452 1464 aaPredicted RBP11.23□□□□□ -0.61
SNX22-206ENST00000560997 TNKSO95271 1327 aa11.23□□□□□ -0.61
SNX22-206ENST00000560997 NPHP1O15259 732 aa11.22□□□□□ -0.61
SNX22-206ENST00000560997 KMT5BQ4FZB7 885 aa11.22□□□□□ -0.61
SNX22-206ENST00000560997 RILPL1Q5EBL4 403 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms