RNA–Protein interactions for RNA: ENST00000560734.5

SHF-208, Transcript of Src homology 2 domain containing F, humanhuman

TSL 3 BASIC

Gene SHF, Length 1,731 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-208ENST00000560734 MROH7-TTC4A0A0A0MT08 1334 aa29.18■■■□□ 2.26
SHF-208ENST00000560734 KIF23Q02241 960 aaPredicted RBP29.17■■■□□ 2.26
SHF-208ENST00000560734 PDE4BQ07343 736 aa29.17■■■□□ 2.26
SHF-208ENST00000560734 UVSSAQ2YD98 709 aa29.17■■■□□ 2.26
SHF-208ENST00000560734 RAB11FIP4Q86YS3 637 aa29.17■■■□□ 2.26
SHF-208ENST00000560734 FANCBQ8NB91 859 aa29.17■■■□□ 2.26
SHF-208ENST00000560734 USP28Q96RU2 1077 aa29.17■■■□□ 2.26
SHF-208ENST00000560734 SUGT1Q9Y2Z0 365 aa29.17■■■□□ 2.26
SHF-208ENST00000560734 PARP3Q9Y6F1 533 aa29.17■■■□□ 2.26
SHF-208ENST00000560734 YEATS4O95619 227 aa29.17■■■□□ 2.26
SHF-208ENST00000560734 TRIM22Q8IYM9 498 aa29.17■■■□□ 2.26
SHF-208ENST00000560734 ROBO3Q96MS0 1386 aa29.16■■■□□ 2.26
SHF-208ENST00000560734 GUCY1B3Q02153 619 aa29.16■■■□□ 2.26
SHF-208ENST00000560734 FUCA2Q9BTY2 467 aa29.16■■■□□ 2.26
SHF-208ENST00000560734 RANBP6O60518 1105 aaKnown RBP29.15■■■□□ 2.26
SHF-208ENST00000560734 PLCG2P16885 1265 aa29.15■■■□□ 2.26
SHF-208ENST00000560734 FOSBP53539 338 aa29.15■■■□□ 2.26
SHF-208ENST00000560734 TRIM29Q14134 588 aa29.15■■■□□ 2.26
SHF-208ENST00000560734 ENAHQ8N8S7 591 aaPredicted RBP29.15■■■□□ 2.26
SHF-208ENST00000560734 COA1Q9GZY4 146 aa29.15■■■□□ 2.26
SHF-208ENST00000560734 NUP62CLQ9H1M0 184 aa29.15■■■□□ 2.26
SHF-208ENST00000560734 RBM43Q6ZSC3 357 aaKnown RBP29.14■■■□□ 2.26
SHF-208ENST00000560734 ZKSCAN3Q9BRR0 538 aa29.14■■■□□ 2.26
SHF-208ENST00000560734 GPR75-ASB3A0A0A6YYF3 556 aa29.14■■■□□ 2.25
SHF-208ENST00000560734 DDAH1O94760 285 aa29.14■■■□□ 2.25
SHF-208ENST00000560734 LIG1P18858 919 aa29.14■■■□□ 2.25
SHF-208ENST00000560734 RXRAP19793 462 aa29.14■■■□□ 2.25
SHF-208ENST00000560734 C12orf60Q5U649 245 aa29.14■■■□□ 2.25
SHF-208ENST00000560734 MYSM1Q5VVJ2 828 aa29.14■■■□□ 2.25
SHF-208ENST00000560734 KRT40Q6A162 431 aa29.14■■■□□ 2.25
SHF-208ENST00000560734 AMOTL1Q8IY63 956 aa29.14■■■□□ 2.25
SHF-208ENST00000560734 KCNG4Q8TDN1 519 aa29.14■■■□□ 2.25
SHF-208ENST00000560734 TRIM44Q96DX7 344 aaPredicted RBP29.14■■■□□ 2.25
SHF-208ENST00000560734 MASTLQ96GX5 879 aa29.14■■■□□ 2.25
SHF-208ENST00000560734 RBM28Q9NW13 759 aaKnown RBP29.14■■■□□ 2.25
SHF-208ENST00000560734 CYP2D7A0A087X1C5 515 aa29.13■■■□□ 2.25
SHF-208ENST00000560734 CCDC178Q5BJE1 867 aa29.13■■■□□ 2.25
SHF-208ENST00000560734 CATIPQ7Z7H3 387 aa29.13■■■□□ 2.25
SHF-208ENST00000560734 SLC51AQ86UW1 340 aa29.13■■■□□ 2.25
SHF-208ENST00000560734 CRACR2BQ8N4Y2 399 aaPredicted RBP29.13■■■□□ 2.25
SHF-208ENST00000560734 MYL10Q9BUA6 226 aa29.13■■■□□ 2.25
SHF-208ENST00000560734 RTFDC1Q9BY42 306 aaPredicted RBP29.13■■■□□ 2.25
SHF-208ENST00000560734 PPFIA3O75145 1194 aa29.12■■■□□ 2.25
SHF-208ENST00000560734 DEXIO95424 95 aa29.12■■■□□ 2.25
SHF-208ENST00000560734 MMP10P09238 476 aa29.12■■■□□ 2.25
SHF-208ENST00000560734 U2AF2P26368 475 aaKnown RBP eCLIP29.12■■■□□ 2.25
SHF-208ENST00000560734 IFIT1BQ5T764 474 aaKnown RBP29.12■■■□□ 2.25
SHF-208ENST00000560734 NBPF11Q86T75 865 aa29.12■■■□□ 2.25
SHF-208ENST00000560734 BICD2Q8TD16 824 aa29.12■■■□□ 2.25
SHF-208ENST00000560734 PHKBQ93100 1093 aa29.12■■■□□ 2.25
SHF-208ENST00000560734 CLSTN2Q9H4D0 955 aa29.12■■■□□ 2.25
SHF-208ENST00000560734 JAG2Q9Y219 1238 aa29.12■■■□□ 2.25
SHF-208ENST00000560734 A0A1W2PQ27 194 aa29.11■■■□□ 2.25
SHF-208ENST00000560734 A0A1W2PQ64 194 aa29.11■■■□□ 2.25
SHF-208ENST00000560734 A0A1W2PQD8 194 aa29.11■■■□□ 2.25
SHF-208ENST00000560734 C6orf229H3BNL8 230 aa29.11■■■□□ 2.25
SHF-208ENST00000560734 USP5P45974 858 aa29.11■■■□□ 2.25
SHF-208ENST00000560734 MAP3K11Q16584 847 aa29.11■■■□□ 2.25
SHF-208ENST00000560734 OTUD7BQ6GQQ9 843 aa29.11■■■□□ 2.25
SHF-208ENST00000560734 RNF26Q9BY78 433 aaPredicted RBP29.11■■■□□ 2.25
SHF-208ENST00000560734 MCM9Q9NXL9 1143 aa29.11■■■□□ 2.25
SHF-208ENST00000560734 DACT1Q9NYF0 836 aa29.11■■■□□ 2.25
SHF-208ENST00000560734 GAKO14976 1311 aa29.11■■■□□ 2.25
SHF-208ENST00000560734 HS1BP3Q53T59 392 aa29.11■■■□□ 2.25
SHF-208ENST00000560734 CCDC144CPQ8IYA2 1237 aa29.11■■■□□ 2.25
SHF-208ENST00000560734 LINC00301Q8NCQ3 95 aa29.11■■■□□ 2.25
SHF-208ENST00000560734 GPR101Q96P66 508 aaPredicted RBP29.11■■■□□ 2.25
SHF-208ENST00000560734 SLC26A6Q9BXS9 759 aa29.11■■■□□ 2.25
SHF-208ENST00000560734 CLCN1P35523 988 aa29.1■■■□□ 2.25
SHF-208ENST00000560734 ADALQ6DHV7 355 aa29.1■■■□□ 2.25
SHF-208ENST00000560734 SH3RF3Q8TEJ3 882 aaPredicted RBP29.1■■■□□ 2.25
SHF-208ENST00000560734 PDLIM2Q96JY6 352 aa29.1■■■□□ 2.25
SHF-208ENST00000560734 TMX4Q9H1E5 349 aaPredicted RBP29.1■■■□□ 2.25
SHF-208ENST00000560734 RRAGDQ9NQL2 400 aaPredicted RBP29.1■■■□□ 2.25
SHF-208ENST00000560734 ECM29Q5VYK3 1845 aa29.1■■■□□ 2.25
SHF-208ENST00000560734 MYH2Q9UKX2 1941 aa29.09■■■□□ 2.25
SHF-208ENST00000560734 CCDC192P0DO97 292 aa29.09■■■□□ 2.25
SHF-208ENST00000560734 ANKS1AQ92625 1134 aa29.09■■■□□ 2.25
SHF-208ENST00000560734 CTAGE5O15320 804 aa29.08■■■□□ 2.25
SHF-208ENST00000560734 GRIK5Q16478 980 aa29.08■■■□□ 2.25
SHF-208ENST00000560734 MFSD14BQ5SR56 506 aa29.08■■■□□ 2.25
SHF-208ENST00000560734 STK11IPQ8N1F8 1099 aa29.08■■■□□ 2.25
SHF-208ENST00000560734 MPNDQ8N594 471 aa29.08■■■□□ 2.25
SHF-208ENST00000560734 TNMDQ9H2S6 317 aa29.08■■■□□ 2.25
SHF-208ENST00000560734 ZNF287Q9HBT7 754 aa29.08■■■□□ 2.25
SHF-208ENST00000560734 SMIM22K7EJ46 135 aa29.08■■■□□ 2.25
SHF-208ENST00000560734 TROAPQ12815 778 aa29.08■■■□□ 2.25
SHF-208ENST00000560734 DIXDC1Q155Q3 683 aa29.08■■■□□ 2.25
SHF-208ENST00000560734 MAP3K14Q99558 947 aa29.08■■■□□ 2.25
SHF-208ENST00000560734 QSER1Q2KHR3 1735 aa29.07■■■□□ 2.24
SHF-208ENST00000560734 KIF28PB7ZC32 967 aa29.07■■■□□ 2.24
SHF-208ENST00000560734 STYK1Q6J9G0 422 aa29.07■■■□□ 2.24
SHF-208ENST00000560734 TCP11L1Q9NUJ3 509 aa29.07■■■□□ 2.24
SHF-208ENST00000560734 SAFBQ15424 915 aaKnown RBP eCLIP29.06■■■□□ 2.24
SHF-208ENST00000560734 ANO1Q5XXA6 986 aa29.06■■■□□ 2.24
SHF-208ENST00000560734 DGKHQ86XP1 1220 aa29.06■■■□□ 2.24
SHF-208ENST00000560734 AIFM3Q96NN9 605 aa29.06■■■□□ 2.24
SHF-208ENST00000560734 ZC3H12CQ9C0D7 883 aaKnown RBP29.06■■■□□ 2.24
SHF-208ENST00000560734 NAV1Q8NEY1 1877 aa29.06■■■□□ 2.24
SHF-208ENST00000560734 NR1I2O75469 434 aa29.06■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms