RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 CSRNP1Q96S65 589 aa7.88□□□□□ -1.15
TSPAN3-209ENST00000560715 CARD10Q9BWT7 1032 aa7.88□□□□□ -1.15
TSPAN3-209ENST00000560715 C9orf78Q9NZ63 289 aaPredicted RBP7.88□□□□□ -1.15
TSPAN3-209ENST00000560715 ANKIB1Q9P2G1 1089 aa7.88□□□□□ -1.15
TSPAN3-209ENST00000560715 PCDHGB3Q9Y5G1 929 aa7.88□□□□□ -1.15
TSPAN3-209ENST00000560715 USP31Q70CQ4 1352 aa7.87□□□□□ -1.15
TSPAN3-209ENST00000560715 KDM5AP29375 1690 aaKnown RBP7.87□□□□□ -1.15
TSPAN3-209ENST00000560715 NBPF26B4DH59 902 aa7.87□□□□□ -1.15
TSPAN3-209ENST00000560715 F2P00734 622 aa7.87□□□□□ -1.15
TSPAN3-209ENST00000560715 NEK2P51955 445 aa7.87□□□□□ -1.15
TSPAN3-209ENST00000560715 GTF2A1P52655 376 aaPredicted RBP7.87□□□□□ -1.15
TSPAN3-209ENST00000560715 STRN3Q13033 797 aa7.87□□□□□ -1.15
TSPAN3-209ENST00000560715 SH3PXD2AQ5TCZ1 1133 aa7.87□□□□□ -1.15
TSPAN3-209ENST00000560715 MCTP1Q6DN14 999 aa7.87□□□□□ -1.15
TSPAN3-209ENST00000560715 FBXL19Q6PCT2 694 aa7.87□□□□□ -1.15
TSPAN3-209ENST00000560715 DGKHQ86XP1 1220 aa7.87□□□□□ -1.15
TSPAN3-209ENST00000560715 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.87□□□□□ -1.15
TSPAN3-209ENST00000560715 RSPH14Q9UHP6 348 aa7.87□□□□□ -1.15
TSPAN3-209ENST00000560715 PCDHB11Q9Y5F2 797 aa7.87□□□□□ -1.15
TSPAN3-209ENST00000560715 A0A087X0B3 334 aa7.87□□□□□ -1.15
TSPAN3-209ENST00000560715 HIP1RO75146 1068 aa7.87□□□□□ -1.15
TSPAN3-209ENST00000560715 ZBED6P86452 979 aa7.87□□□□□ -1.15
TSPAN3-209ENST00000560715 KIF18AQ8NI77 898 aa7.87□□□□□ -1.15
TSPAN3-209ENST00000560715 COG1Q8WTW3 980 aa7.87□□□□□ -1.15
TSPAN3-209ENST00000560715 CHAC2Q8WUX2 184 aa7.87□□□□□ -1.15
TSPAN3-209ENST00000560715 SEC16BQ96JE7 1060 aa7.87□□□□□ -1.15
TSPAN3-209ENST00000560715 NCAPGQ9BPX3 1015 aa7.87□□□□□ -1.15
TSPAN3-209ENST00000560715 ADAMTS8Q9UP79 889 aa7.87□□□□□ -1.15
TSPAN3-209ENST00000560715 RASGRP1O95267 797 aa7.86□□□□□ -1.15
TSPAN3-209ENST00000560715 TIE1P35590 1138 aa7.86□□□□□ -1.15
TSPAN3-209ENST00000560715 MLECQ14165 292 aa7.86□□□□□ -1.15
TSPAN3-209ENST00000560715 MAPRE1Q15691 268 aaKnown RBP7.86□□□□□ -1.15
TSPAN3-209ENST00000560715 DRC7Q8IY82 874 aa7.86□□□□□ -1.15
TSPAN3-209ENST00000560715 RUNDC1Q96C34 613 aa7.86□□□□□ -1.15
TSPAN3-209ENST00000560715 REREQ9P2R6 1566 aa7.86□□□□□ -1.15
TSPAN3-209ENST00000560715 TMEM95Q3KNT9 176 aa7.86□□□□□ -1.15
TSPAN3-209ENST00000560715 CCDC174Q6PII3 467 aa7.86□□□□□ -1.15
TSPAN3-209ENST00000560715 MORC1Q86VD1 984 aa7.86□□□□□ -1.15
TSPAN3-209ENST00000560715 GJD3Q8N144 294 aa7.86□□□□□ -1.15
TSPAN3-209ENST00000560715 GPT2Q8TD30 523 aa7.86□□□□□ -1.15
TSPAN3-209ENST00000560715 RWDD1Q9H446 243 aaPredicted RBP7.86□□□□□ -1.15
TSPAN3-209ENST00000560715 SMC4Q9NTJ3 1288 aa7.86□□□□□ -1.15
TSPAN3-209ENST00000560715 PRKAG3Q9UGI9 489 aa7.86□□□□□ -1.15
TSPAN3-209ENST00000560715 MSRB2Q9Y3D2 182 aa7.86□□□□□ -1.15
TSPAN3-209ENST00000560715 ADGRF5Q8IZF2 1346 aa7.86□□□□□ -1.15
TSPAN3-209ENST00000560715 MYOM1P52179 1685 aa7.86□□□□□ -1.15
TSPAN3-209ENST00000560715 hCG_1642624A0A1W2PR95 340 aa7.85□□□□□ -1.15
TSPAN3-209ENST00000560715 GOLGA6CA6NDK9 693 aa7.85□□□□□ -1.15
TSPAN3-209ENST00000560715 GOLGA6BA6NDN3 693 aa7.85□□□□□ -1.15
TSPAN3-209ENST00000560715 GOLGA6DP0CG33 693 aa7.85□□□□□ -1.15
TSPAN3-209ENST00000560715 GBP2P32456 591 aaPredicted RBP7.85□□□□□ -1.15
TSPAN3-209ENST00000560715 CYP2C19P33261 490 aa7.85□□□□□ -1.15
TSPAN3-209ENST00000560715 ATN1P54259 1190 aaPredicted RBP7.85□□□□□ -1.15
TSPAN3-209ENST00000560715 HNRNPH2P55795 449 aaKnown RBP7.85□□□□□ -1.15
TSPAN3-209ENST00000560715 ESCO1Q5FWF5 840 aa7.85□□□□□ -1.15
TSPAN3-209ENST00000560715 C1orf53Q5VUE5 145 aa7.85□□□□□ -1.15
TSPAN3-209ENST00000560715 NIM1KQ8IY84 436 aa7.85□□□□□ -1.15
TSPAN3-209ENST00000560715 IFNL3Q8IZI9 196 aa7.85□□□□□ -1.15
TSPAN3-209ENST00000560715 C17orf53Q8N3J3 647 aaPredicted RBP7.85□□□□□ -1.15
TSPAN3-209ENST00000560715 PLD4Q96BZ4 506 aa7.85□□□□□ -1.15
TSPAN3-209ENST00000560715 TRERF1Q96PN7 1200 aa7.85□□□□□ -1.15
TSPAN3-209ENST00000560715 RASSF4Q9H2L5 321 aa7.85□□□□□ -1.15
TSPAN3-209ENST00000560715 OCEL1Q9H607 264 aa7.85□□□□□ -1.15
TSPAN3-209ENST00000560715 CNNM2Q9H8M5 875 aa7.85□□□□□ -1.15
TSPAN3-209ENST00000560715 GOLGA6AQ9NYA3 693 aa7.85□□□□□ -1.15
TSPAN3-209ENST00000560715 FAM53CQ9NYF3 392 aa7.85□□□□□ -1.15
TSPAN3-209ENST00000560715 SYCE3A1L190 88 aa7.85□□□□□ -1.15
TSPAN3-209ENST00000560715 RASSF10A6NK89 507 aa7.85□□□□□ -1.15
TSPAN3-209ENST00000560715 TMEM229AB2RXF0 380 aa7.85□□□□□ -1.15
TSPAN3-209ENST00000560715 RGS20O76081 388 aa7.85□□□□□ -1.15
TSPAN3-209ENST00000560715 TCEA2Q15560 299 aa7.85□□□□□ -1.15
TSPAN3-209ENST00000560715 C2orf27AQ580R0 203 aa7.85□□□□□ -1.15
TSPAN3-209ENST00000560715 GPR152Q8TDT2 470 aa7.85□□□□□ -1.15
TSPAN3-209ENST00000560715 PANK1Q8TE04 598 aa7.85□□□□□ -1.15
TSPAN3-209ENST00000560715 ZNF296Q8WUU4 475 aaPredicted RBP7.85□□□□□ -1.15
TSPAN3-209ENST00000560715 CITED4Q96RK1 184 aa7.85□□□□□ -1.15
TSPAN3-209ENST00000560715 BRMS1Q9HCU9 246 aa7.85□□□□□ -1.15
TSPAN3-209ENST00000560715 ZNF180Q9UJW8 692 aa7.85□□□□□ -1.15
TSPAN3-209ENST00000560715 SLC45A1Q9Y2W3 748 aa7.85□□□□□ -1.15
TSPAN3-209ENST00000560715 PIK3C2GO75747 1445 aa7.85□□□□□ -1.15
TSPAN3-209ENST00000560715 YEATS2Q9ULM3 1422 aa7.85□□□□□ -1.15
TSPAN3-209ENST00000560715 ATAD2Q6PL18 1390 aa7.85□□□□□ -1.15
TSPAN3-209ENST00000560715 APAF1O14727 1248 aa7.85□□□□□ -1.15
TSPAN3-209ENST00000560715 GALR2O43603 387 aaPredicted RBP7.85□□□□□ -1.15
TSPAN3-209ENST00000560715 NBPF7P0C2Y1 421 aaPredicted RBP7.85□□□□□ -1.15
TSPAN3-209ENST00000560715 MYBP10242 640 aa7.85□□□□□ -1.15
TSPAN3-209ENST00000560715 NUCB2P80303 420 aa7.85□□□□□ -1.15
TSPAN3-209ENST00000560715 ZBTB33Q86T24 672 aa7.85□□□□□ -1.15
TSPAN3-209ENST00000560715 DZIP3Q86Y13 1208 aaKnown RBP7.85□□□□□ -1.15
TSPAN3-209ENST00000560715 SHDQ96IW2 340 aa7.85□□□□□ -1.15
TSPAN3-209ENST00000560715 GPR101Q96P66 508 aaPredicted RBP7.85□□□□□ -1.15
TSPAN3-209ENST00000560715 NPHS2Q9NP85 383 aa7.85□□□□□ -1.15
TSPAN3-209ENST00000560715 JADE2Q9NQC1 790 aa7.85□□□□□ -1.15
TSPAN3-209ENST00000560715 TMEM63CQ9P1W3 806 aa7.85□□□□□ -1.15
TSPAN3-209ENST00000560715 FOXD3Q9UJU5 478 aaPredicted RBP7.85□□□□□ -1.15
TSPAN3-209ENST00000560715 PPP2R3BQ9Y5P8 575 aa7.85□□□□□ -1.15
TSPAN3-209ENST00000560715 PREX1Q8TCU6 1659 aa7.84□□□□□ -1.15
TSPAN3-209ENST00000560715 TCEA3O75764 348 aa7.84□□□□□ -1.15
TSPAN3-209ENST00000560715 CYP2E1P05181 493 aaPredicted RBP7.84□□□□□ -1.15
TSPAN3-209ENST00000560715 LMNB1P20700 586 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms