RNA–Protein interactions for RNA: ENST00000560491.2

LYSMD2-204, Transcript of LysM domain containing 2, humanhuman

TSL 3 BASIC

Gene LYSMD2, Length 1,026 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-204ENST00000560491 HELLSQ9NRZ9 838 aa18.62■□□□□ 0.57
LYSMD2-204ENST00000560491 ATP8A2Q9NTI2 1148 aa18.62■□□□□ 0.57
LYSMD2-204ENST00000560491 WDR33Q9C0J8 1336 aaKnown RBP18.62■□□□□ 0.57
LYSMD2-204ENST00000560491 GSG1L2A8MUP6 293 aa18.61■□□□□ 0.57
LYSMD2-204ENST00000560491 FAM155AB1AL88 458 aaPredicted RBP18.61■□□□□ 0.57
LYSMD2-204ENST00000560491 AOC2O75106 756 aa18.61■□□□□ 0.57
LYSMD2-204ENST00000560491 POLR3DP05423 398 aaPredicted RBP18.61■□□□□ 0.57
LYSMD2-204ENST00000560491 PLCD1P51178 756 aa18.61■□□□□ 0.57
LYSMD2-204ENST00000560491 MAP3K9P80192 1104 aa18.61■□□□□ 0.57
LYSMD2-204ENST00000560491 MAP3K10Q02779 954 aa18.61■□□□□ 0.57
LYSMD2-204ENST00000560491 TICAM2Q86XR7 235 aa18.61■□□□□ 0.57
LYSMD2-204ENST00000560491 DNAJC18Q9H819 358 aa18.61■□□□□ 0.57
LYSMD2-204ENST00000560491 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.61■□□□□ 0.57
LYSMD2-204ENST00000560491 EPB41L4AQ9HCS5 686 aaPredicted RBP18.61■□□□□ 0.57
LYSMD2-204ENST00000560491 DIAPH3Q9NSV4 1193 aa18.61■□□□□ 0.57
LYSMD2-204ENST00000560491 ZNF112Q9UJU3 913 aa18.61■□□□□ 0.57
LYSMD2-204ENST00000560491 CYP2D7A0A087X1C5 515 aa18.6■□□□□ 0.57
LYSMD2-204ENST00000560491 PHF20L1A8MW92 1017 aa18.6■□□□□ 0.57
LYSMD2-204ENST00000560491 TBC1D12O60347 775 aa18.6■□□□□ 0.57
LYSMD2-204ENST00000560491 SLC10A3P09131 477 aa18.6■□□□□ 0.57
LYSMD2-204ENST00000560491 ECE1P42892 770 aa18.6■□□□□ 0.57
LYSMD2-204ENST00000560491 MKRN3Q13064 507 aaKnown RBP18.6■□□□□ 0.57
LYSMD2-204ENST00000560491 MAPK8IP2Q13387 824 aaPredicted RBP18.6■□□□□ 0.57
LYSMD2-204ENST00000560491 MCMDC2Q4G0Z9 681 aa18.6■□□□□ 0.57
LYSMD2-204ENST00000560491 CWC27Q6UX04 472 aaKnown RBP18.6■□□□□ 0.57
LYSMD2-204ENST00000560491 ZNF589Q86UQ0 364 aaPredicted RBP18.6■□□□□ 0.57
LYSMD2-204ENST00000560491 CRACR2BQ8N4Y2 399 aaPredicted RBP18.6■□□□□ 0.57
LYSMD2-204ENST00000560491 CSADQ9Y600 493 aa18.6■□□□□ 0.57
LYSMD2-204ENST00000560491 SNCAIPQ9Y6H5 919 aa18.6■□□□□ 0.57
LYSMD2-204ENST00000560491 MYH8P13535 1937 aa18.6■□□□□ 0.57
LYSMD2-204ENST00000560491 USP17L12C9JPN9 530 aa18.59■□□□□ 0.57
LYSMD2-204ENST00000560491 USP17L21D6R901 530 aa18.59■□□□□ 0.57
LYSMD2-204ENST00000560491 SMIM22K7EJ46 135 aa18.59■□□□□ 0.57
LYSMD2-204ENST00000560491 HIP1O00291 1037 aa18.59■□□□□ 0.57
LYSMD2-204ENST00000560491 FOXP2O15409 715 aa18.59■□□□□ 0.57
LYSMD2-204ENST00000560491 APPP05067 770 aa18.59■□□□□ 0.57
LYSMD2-204ENST00000560491 GNAT2P19087 354 aa18.59■□□□□ 0.57
LYSMD2-204ENST00000560491 RRP1BQ14684 758 aaKnown RBP18.59■□□□□ 0.57
LYSMD2-204ENST00000560491 VPS53Q5VIR6 699 aa18.59■□□□□ 0.57
LYSMD2-204ENST00000560491 TTC6Q86TZ1 520 aa18.59■□□□□ 0.57
LYSMD2-204ENST00000560491 CNKSR2Q8WXI2 1034 aa18.59■□□□□ 0.57
LYSMD2-204ENST00000560491 SLC10A4Q96EP9 437 aa18.59■□□□□ 0.57
LYSMD2-204ENST00000560491 DDRGK1Q96HY6 314 aa18.59■□□□□ 0.57
LYSMD2-204ENST00000560491 ZIC5Q96T25 663 aa18.59■□□□□ 0.57
LYSMD2-204ENST00000560491 TRIM34Q9BYJ4 488 aa18.59■□□□□ 0.57
LYSMD2-204ENST00000560491 HERC5Q9UII4 1024 aaKnown RBP18.59■□□□□ 0.57
LYSMD2-204ENST00000560491 CCDC171Q6TFL3 1326 aa18.58■□□□□ 0.57
LYSMD2-204ENST00000560491 UNCXA6NJT0 531 aa18.58■□□□□ 0.56
LYSMD2-204ENST00000560491 CTR9Q6PD62 1173 aa18.58■□□□□ 0.56
LYSMD2-204ENST00000560491 METTL16Q86W50 562 aaKnown RBP18.58■□□□□ 0.56
LYSMD2-204ENST00000560491 FOXP4Q8IVH2 680 aaPredicted RBP18.58■□□□□ 0.56
LYSMD2-204ENST00000560491 CCDC102AQ96A19 550 aa18.58■□□□□ 0.56
LYSMD2-204ENST00000560491 WNK4Q96J92 1243 aa18.58■□□□□ 0.56
LYSMD2-204ENST00000560491 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.58■□□□□ 0.56
LYSMD2-204ENST00000560491 SERPINB13Q9UIV8 391 aa18.58■□□□□ 0.56
LYSMD2-204ENST00000560491 PATL2C9JE40 543 aaKnown RBP18.57■□□□□ 0.56
LYSMD2-204ENST00000560491 GJA5P36382 358 aa18.57■□□□□ 0.56
LYSMD2-204ENST00000560491 TDO2P48775 406 aa18.57■□□□□ 0.56
LYSMD2-204ENST00000560491 BMP2KLQ5H9B9 411 aa18.57■□□□□ 0.56
LYSMD2-204ENST00000560491 IFNL3Q8IZI9 196 aa18.57■□□□□ 0.56
LYSMD2-204ENST00000560491 OPTNQ96CV9 577 aa18.57■□□□□ 0.56
LYSMD2-204ENST00000560491 DYNLL2Q96FJ2 89 aa18.57■□□□□ 0.56
LYSMD2-204ENST00000560491 EHD4Q9H223 541 aa18.57■□□□□ 0.56
LYSMD2-204ENST00000560491 IL25Q9H293 177 aa18.57■□□□□ 0.56
LYSMD2-204ENST00000560491 PHIPQ8WWQ0 1821 aa18.57■□□□□ 0.56
LYSMD2-204ENST00000560491 CHMLP26374 656 aa18.56■□□□□ 0.56
LYSMD2-204ENST00000560491 SHROOM1Q2M3G4 852 aaPredicted RBP18.56■□□□□ 0.56
LYSMD2-204ENST00000560491 NOL9Q5SY16 702 aaKnown RBP18.56■□□□□ 0.56
LYSMD2-204ENST00000560491 C12orf60Q5U649 245 aa18.56■□□□□ 0.56
LYSMD2-204ENST00000560491 SPRYD7Q5W111 196 aa18.56■□□□□ 0.56
LYSMD2-204ENST00000560491 GIMAP6Q6P9H5 292 aa18.56■□□□□ 0.56
LYSMD2-204ENST00000560491 SCYL3Q8IZE3 742 aa18.56■□□□□ 0.56
LYSMD2-204ENST00000560491 SLC44A5Q8NCS7 719 aa18.56■□□□□ 0.56
LYSMD2-204ENST00000560491 ARPP21Q9UBL0 812 aaPredicted RBP18.56■□□□□ 0.56
LYSMD2-204ENST00000560491 PCNTO95613 3336 aa18.55■□□□□ 0.56
LYSMD2-204ENST00000560491 SPDYE5A6NIY4 337 aa18.55■□□□□ 0.56
LYSMD2-204ENST00000560491 MINDY4BA8MYZ0 360 aa18.55■□□□□ 0.56
LYSMD2-204ENST00000560491 SHMT1P34896 483 aa18.55■□□□□ 0.56
LYSMD2-204ENST00000560491 GABPAQ06546 454 aa18.55■□□□□ 0.56
LYSMD2-204ENST00000560491 NOGQ13253 232 aa18.55■□□□□ 0.56
LYSMD2-204ENST00000560491 CCDC84Q86UT8 332 aaPredicted RBP18.55■□□□□ 0.56
LYSMD2-204ENST00000560491 AMOTL1Q8IY63 956 aa18.55■□□□□ 0.56
LYSMD2-204ENST00000560491 OTUD5Q96G74 571 aa18.55■□□□□ 0.56
LYSMD2-204ENST00000560491 NACAP1Q9BZK3 213 aa18.55■□□□□ 0.56
LYSMD2-204ENST00000560491 CTNND1O60716 968 aaKnown RBP18.54■□□□□ 0.56
LYSMD2-204ENST00000560491 GDF11O95390 407 aa18.54■□□□□ 0.56
LYSMD2-204ENST00000560491 JAG1P78504 1218 aa18.54■□□□□ 0.56
LYSMD2-204ENST00000560491 KIF23Q02241 960 aaPredicted RBP18.54■□□□□ 0.56
LYSMD2-204ENST00000560491 SBK1Q52WX2 424 aa18.54■□□□□ 0.56
LYSMD2-204ENST00000560491 STK11IPQ8N1F8 1099 aa18.54■□□□□ 0.56
LYSMD2-204ENST00000560491 NAPBQ9H115 298 aa18.54■□□□□ 0.56
LYSMD2-204ENST00000560491 HSPD1P10809 573 aaKnown RBP18.53■□□□□ 0.56
LYSMD2-204ENST00000560491 CAP2P40123 477 aa18.53■□□□□ 0.56
LYSMD2-204ENST00000560491 ERO1BQ86YB8 467 aa18.53■□□□□ 0.56
LYSMD2-204ENST00000560491 JMYQ8N9B5 988 aa18.53■□□□□ 0.56
LYSMD2-204ENST00000560491 PICK1Q9NRD5 415 aa18.53■□□□□ 0.56
LYSMD2-204ENST00000560491 LAMA4Q16363 1823 aa18.52■□□□□ 0.56
LYSMD2-204ENST00000560491 ZBTB48P10074 688 aaPredicted RBP18.52■□□□□ 0.56
LYSMD2-204ENST00000560491 MAP2K2P36507 400 aa18.52■□□□□ 0.56
LYSMD2-204ENST00000560491 MFAP1P55081 439 aaKnown RBP18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms