RNA–Protein interactions for RNA: ENST00000560483.1

LRRC28-219, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-219ENST00000560483 V9GY48 417 aaPredicted RBP9.76□□□□□ -0.85
LRRC28-219ENST00000560483 PITPNM2Q9BZ72 1349 aa9.76□□□□□ -0.85
LRRC28-219ENST00000560483 ZNF646O15015 1829 aaPredicted RBP9.75□□□□□ -0.85
LRRC28-219ENST00000560483 SMARCA5O60264 1052 aaPredicted RBP9.75□□□□□ -0.85
LRRC28-219ENST00000560483 ECE1P42892 770 aa9.75□□□□□ -0.85
LRRC28-219ENST00000560483 MCAMP43121 646 aa9.75□□□□□ -0.85
LRRC28-219ENST00000560483 CACNB3P54284 484 aa9.75□□□□□ -0.85
LRRC28-219ENST00000560483 GSTO1P78417 241 aa9.75□□□□□ -0.85
LRRC28-219ENST00000560483 SIRT2Q8IXJ6 389 aa9.75□□□□□ -0.85
LRRC28-219ENST00000560483 GPATCH3Q96I76 525 aa9.75□□□□□ -0.85
LRRC28-219ENST00000560483 DEFB129Q9H1M3 183 aa9.75□□□□□ -0.85
LRRC28-219ENST00000560483 HMG20BQ9P0W2 317 aa9.75□□□□□ -0.85
LRRC28-219ENST00000560483 ZNF70Q9UC06 446 aaPredicted RBP9.75□□□□□ -0.85
LRRC28-219ENST00000560483 DBNLQ9UJU6 430 aaKnown RBP9.75□□□□□ -0.85
LRRC28-219ENST00000560483 MYH2Q9UKX2 1941 aa9.75□□□□□ -0.85
LRRC28-219ENST00000560483 ECM29Q5VYK3 1845 aa9.75□□□□□ -0.85
LRRC28-219ENST00000560483 COL1A1P02452 1464 aaPredicted RBP9.74□□□□□ -0.85
LRRC28-219ENST00000560483 IDH1O75874 414 aaKnown RBP9.74□□□□□ -0.85
LRRC28-219ENST00000560483 LDHCP07864 332 aa9.74□□□□□ -0.85
LRRC28-219ENST00000560483 ARID4AP29374 1257 aaPredicted RBP9.74□□□□□ -0.85
LRRC28-219ENST00000560483 ZNF157P51786 506 aaPredicted RBP9.74□□□□□ -0.85
LRRC28-219ENST00000560483 HDLBPQ00341 1268 aaKnown RBP9.74□□□□□ -0.85
LRRC28-219ENST00000560483 SUPT20HL1Q3ZLR7 823 aa9.74□□□□□ -0.85
LRRC28-219ENST00000560483 CST9Q5W186 159 aa9.74□□□□□ -0.85
LRRC28-219ENST00000560483 CYP4F22Q6NT55 531 aa9.74□□□□□ -0.85
LRRC28-219ENST00000560483 HHIPL2Q6UWX4 724 aa9.74□□□□□ -0.85
LRRC28-219ENST00000560483 ARMC9Q7Z3E5 817 aa9.74□□□□□ -0.85
LRRC28-219ENST00000560483 ZSCAN29Q8IWY8 852 aaPredicted RBP9.74□□□□□ -0.85
LRRC28-219ENST00000560483 MTMR14Q8NCE2 650 aa9.74□□□□□ -0.85
LRRC28-219ENST00000560483 ZNF775Q96BV0 537 aaPredicted RBP9.74□□□□□ -0.85
LRRC28-219ENST00000560483 BEGAINQ9BUH8 593 aa9.74□□□□□ -0.85
LRRC28-219ENST00000560483 USP40Q9NVE5 1235 aa9.74□□□□□ -0.85
LRRC28-219ENST00000560483 NDUFB9Q9Y6M9 179 aa9.74□□□□□ -0.85
LRRC28-219ENST00000560483 PPP1R12BO60237 982 aaPredicted RBP9.73□□□□□ -0.85
LRRC28-219ENST00000560483 OSBPP22059 807 aa9.73□□□□□ -0.85
LRRC28-219ENST00000560483 ZAP70P43403 619 aa9.73□□□□□ -0.85
LRRC28-219ENST00000560483 VEGFBP49765 207 aa9.73□□□□□ -0.85
LRRC28-219ENST00000560483 MECOMQ03112 1051 aa9.73□□□□□ -0.85
LRRC28-219ENST00000560483 TCP10Q12799 353 aa9.73□□□□□ -0.85
LRRC28-219ENST00000560483 PICALMQ13492 652 aa9.73□□□□□ -0.85
LRRC28-219ENST00000560483 RASA3Q14644 834 aa9.73□□□□□ -0.85
LRRC28-219ENST00000560483 SWT1Q5T5J6 900 aaKnown RBP9.73□□□□□ -0.85
LRRC28-219ENST00000560483 ZNF787Q6DD87 383 aa9.73□□□□□ -0.85
LRRC28-219ENST00000560483 NAA16Q6N069 864 aaPredicted RBP9.73□□□□□ -0.85
LRRC28-219ENST00000560483 EXOC6Q8TAG9 804 aa9.73□□□□□ -0.85
LRRC28-219ENST00000560483 AIDAQ96BJ3 306 aa9.73□□□□□ -0.85
LRRC28-219ENST00000560483 CAPNS2Q96L46 248 aa9.73□□□□□ -0.85
LRRC28-219ENST00000560483 ZDHHC15Q96MV8 337 aa9.73□□□□□ -0.85
LRRC28-219ENST00000560483 ANGEL1Q9UNK9 670 aaKnown RBP9.73□□□□□ -0.85
LRRC28-219ENST00000560483 DAGLAQ9Y4D2 1042 aa9.73□□□□□ -0.85
LRRC28-219ENST00000560483 PCDHB15Q9Y5E8 787 aa9.73□□□□□ -0.85
LRRC28-219ENST00000560483 TLL2Q9Y6L7 1015 aa9.73□□□□□ -0.85
LRRC28-219ENST00000560483 SALL1Q9NSC2 1324 aa9.73□□□□□ -0.85
LRRC28-219ENST00000560483 CNTNAP1P78357 1384 aa9.73□□□□□ -0.85
LRRC28-219ENST00000560483 UBE2Q2LH0YL09 131 aa9.72□□□□□ -0.85
LRRC28-219ENST00000560483 BTDP43251 543 aa9.72□□□□□ -0.85
LRRC28-219ENST00000560483 IREB2P48200 963 aaKnown RBP9.72□□□□□ -0.85
LRRC28-219ENST00000560483 ANKRD45Q5TZF3 282 aa9.72□□□□□ -0.85
LRRC28-219ENST00000560483 MOB2Q70IA6 237 aa9.72□□□□□ -0.85
LRRC28-219ENST00000560483 SAPCD2Q86UD0 394 aa9.72□□□□□ -0.85
LRRC28-219ENST00000560483 ZBED3Q96IU2 234 aaPredicted RBP9.72□□□□□ -0.85
LRRC28-219ENST00000560483 TMEM39BQ9GZU3 492 aa9.72□□□□□ -0.85
LRRC28-219ENST00000560483 BOLA2Q9H3K6 86 aa9.72□□□□□ -0.85
LRRC28-219ENST00000560483 RWDD1Q9H446 243 aaPredicted RBP9.72□□□□□ -0.85
LRRC28-219ENST00000560483 PPP2R3BQ9Y5P8 575 aa9.72□□□□□ -0.85
LRRC28-219ENST00000560483 AOX1Q06278 1338 aa9.72□□□□□ -0.85
LRRC28-219ENST00000560483 WDR33Q9C0J8 1336 aaKnown RBP9.72□□□□□ -0.85
LRRC28-219ENST00000560483 RASSF10A6NK89 507 aa9.71□□□□□ -0.86
LRRC28-219ENST00000560483 GOLIM4O00461 696 aa9.71□□□□□ -0.86
LRRC28-219ENST00000560483 BAG3O95817 575 aa9.71□□□□□ -0.86
LRRC28-219ENST00000560483 MAP3K12Q12852 859 aa9.71□□□□□ -0.86
LRRC28-219ENST00000560483 TTF1Q15361 905 aaPredicted RBP9.71□□□□□ -0.86
LRRC28-219ENST00000560483 NBPF12Q5TAG4 269 aaPredicted RBP9.71□□□□□ -0.86
LRRC28-219ENST00000560483 B4GALNT3Q6L9W6 998 aa9.71□□□□□ -0.86
LRRC28-219ENST00000560483 APOBEC3HQ6NTF7 200 aaKnown RBP9.71□□□□□ -0.86
LRRC28-219ENST00000560483 RGMBQ6NW40 437 aa9.71□□□□□ -0.86
LRRC28-219ENST00000560483 CDC42EP5Q6NZY7 148 aa9.71□□□□□ -0.86
LRRC28-219ENST00000560483 PADI6Q6TGC4 694 aa9.71□□□□□ -0.86
LRRC28-219ENST00000560483 MAGEB6Q8N7X4 407 aa9.71□□□□□ -0.86
LRRC28-219ENST00000560483 DCTPP1Q9H773 170 aa9.71□□□□□ -0.86
LRRC28-219ENST00000560483 AATFQ9NY61 560 aaKnown RBP eCLIP9.71□□□□□ -0.86
LRRC28-219ENST00000560483 FZD1Q9UP38 647 aa9.71□□□□□ -0.86
LRRC28-219ENST00000560483 MROH7-TTC4A0A0A0MT08 1334 aa9.71□□□□□ -0.86
LRRC28-219ENST00000560483 PDS5AQ29RF7 1337 aaKnown RBP9.71□□□□□ -0.86
LRRC28-219ENST00000560483 TLL1O43897 1013 aa9.7□□□□□ -0.86
LRRC28-219ENST00000560483 AOC2O75106 756 aa9.7□□□□□ -0.86
LRRC28-219ENST00000560483 CYP2E1P05181 493 aaPredicted RBP9.7□□□□□ -0.86
LRRC28-219ENST00000560483 CYP7A1P22680 504 aa9.7□□□□□ -0.86
LRRC28-219ENST00000560483 FKBP1BP68106 108 aa9.7□□□□□ -0.86
LRRC28-219ENST00000560483 AAMPQ13685 434 aa9.7□□□□□ -0.86
LRRC28-219ENST00000560483 TEX11Q8IYF3 940 aa9.7□□□□□ -0.86
LRRC28-219ENST00000560483 DNAJC5GQ8N7S2 189 aa9.7□□□□□ -0.86
LRRC28-219ENST00000560483 NSUN4Q96CB9 384 aaKnown RBP9.7□□□□□ -0.86
LRRC28-219ENST00000560483 HOOK2Q96ED9 719 aa9.7□□□□□ -0.86
LRRC28-219ENST00000560483 MRIQ9BWK5 157 aa9.7□□□□□ -0.86
LRRC28-219ENST00000560483 TRIM34Q9BYJ4 488 aa9.7□□□□□ -0.86
LRRC28-219ENST00000560483 PIH1D3Q9NQM4 214 aaKnown RBP9.7□□□□□ -0.86
LRRC28-219ENST00000560483 NPDC1Q9NQX5 325 aaPredicted RBP9.7□□□□□ -0.86
LRRC28-219ENST00000560483 PCNTO95613 3336 aa9.69□□□□□ -0.86
LRRC28-219ENST00000560483 NEFLP07196 543 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms