RNA–Protein interactions for RNA: ENST00000560320.1

CRTC3-209, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 4

Gene CRTC3, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-209ENST00000560320 SCNN1DP51172 638 aa12.46□□□□□ -0.41
CRTC3-209ENST00000560320 RBM5P52756 815 aaKnown RBP eCLIP12.46□□□□□ -0.41
CRTC3-209ENST00000560320 ANTXR2P58335 489 aa12.46□□□□□ -0.41
CRTC3-209ENST00000560320 HMGN5P82970 282 aaKnown RBP12.46□□□□□ -0.41
CRTC3-209ENST00000560320 WTAPQ15007 396 aa12.46□□□□□ -0.41
CRTC3-209ENST00000560320 CYB5R4Q7L1T6 521 aa12.46□□□□□ -0.41
CRTC3-209ENST00000560320 MAPKAPK5Q8IW41 473 aa12.46□□□□□ -0.41
CRTC3-209ENST00000560320 CERS5Q8N5B7 392 aa12.46□□□□□ -0.41
CRTC3-209ENST00000560320 FAM184AQ8NB25 1140 aa12.46□□□□□ -0.41
CRTC3-209ENST00000560320 TAOK3Q9H2K8 898 aa12.46□□□□□ -0.41
CRTC3-209ENST00000560320 ZNF277Q9NRM2 450 aaPredicted RBP12.46□□□□□ -0.41
CRTC3-209ENST00000560320 ZSWIM5Q9P217 1185 aa12.46□□□□□ -0.41
CRTC3-209ENST00000560320 HDAC9Q9UKV0 1011 aa12.46□□□□□ -0.41
CRTC3-209ENST00000560320 BCS1LQ9Y276 419 aa12.46□□□□□ -0.41
CRTC3-209ENST00000560320 MYH6P13533 1939 aa12.45□□□□□ -0.42
CRTC3-209ENST00000560320 GOLGA8BA8MQT2 603 aa12.45□□□□□ -0.42
CRTC3-209ENST00000560320 CPLX1O14810 134 aa12.45□□□□□ -0.42
CRTC3-209ENST00000560320 ORC4O43929 436 aa12.45□□□□□ -0.42
CRTC3-209ENST00000560320 RANBP6O60518 1105 aaKnown RBP12.45□□□□□ -0.42
CRTC3-209ENST00000560320 LIFRP42702 1097 aa12.45□□□□□ -0.42
CRTC3-209ENST00000560320 CRKP46108 304 aa12.45□□□□□ -0.42
CRTC3-209ENST00000560320 EVCP57679 992 aa12.45□□□□□ -0.42
CRTC3-209ENST00000560320 COL9A3Q14050 684 aaPredicted RBP12.45□□□□□ -0.42
CRTC3-209ENST00000560320 CCDC178Q5BJE1 867 aa12.45□□□□□ -0.42
CRTC3-209ENST00000560320 KIAA0825Q8IV33 1275 aa12.45□□□□□ -0.42
CRTC3-209ENST00000560320 JDP2Q8WYK2 163 aa12.45□□□□□ -0.42
CRTC3-209ENST00000560320 TNPO1Q92973 898 aaKnown RBP12.45□□□□□ -0.42
CRTC3-209ENST00000560320 ANP32EQ9BTT0 268 aa12.45□□□□□ -0.42
CRTC3-209ENST00000560320 MKNK2Q9HBH9 465 aa12.45□□□□□ -0.42
CRTC3-209ENST00000560320 PRDM10Q9NQV6 1147 aa12.45□□□□□ -0.42
CRTC3-209ENST00000560320 USP40Q9NVE5 1235 aa12.45□□□□□ -0.42
CRTC3-209ENST00000560320 ADAMTSL1Q8N6G6 1762 aa12.44□□□□□ -0.42
CRTC3-209ENST00000560320 CYP2D7A0A087X1C5 515 aa12.44□□□□□ -0.42
CRTC3-209ENST00000560320 DDX11L8A8MPP1 907 aa12.44□□□□□ -0.42
CRTC3-209ENST00000560320 CDKL5O76039 1030 aa12.44□□□□□ -0.42
CRTC3-209ENST00000560320 USP17L8P0C7I0 530 aa12.44□□□□□ -0.42
CRTC3-209ENST00000560320 PDIA3P30101 505 aaKnown RBP12.44□□□□□ -0.42
CRTC3-209ENST00000560320 C12orf60Q5U649 245 aa12.44□□□□□ -0.42
CRTC3-209ENST00000560320 TTC6Q86TZ1 520 aa12.44□□□□□ -0.42
CRTC3-209ENST00000560320 ZDHHC15Q96MV8 337 aa12.44□□□□□ -0.42
CRTC3-209ENST00000560320 MXD3Q9BW11 206 aa12.44□□□□□ -0.42
CRTC3-209ENST00000560320 SAP30BPQ9UHR5 308 aaKnown RBP12.44□□□□□ -0.42
CRTC3-209ENST00000560320 SERPINA10Q9UK55 444 aa12.44□□□□□ -0.42
CRTC3-209ENST00000560320 ZNRF3Q9ULT6 936 aa12.44□□□□□ -0.42
CRTC3-209ENST00000560320 ATP6V1DQ9Y5K8 247 aa12.44□□□□□ -0.42
CRTC3-209ENST00000560320 SLC12A7Q9Y666 1083 aa12.44□□□□□ -0.42
CRTC3-209ENST00000560320 DDX60LQ5H9U9 1706 aaKnown RBP12.44□□□□□ -0.42
CRTC3-209ENST00000560320 ROBO3Q96MS0 1386 aa12.43□□□□□ -0.42
CRTC3-209ENST00000560320 FLT1P17948 1338 aa12.43□□□□□ -0.42
CRTC3-209ENST00000560320 TSPY2A6NKD2 308 aa12.43□□□□□ -0.42
CRTC3-209ENST00000560320 ZBTB43O43298 467 aa12.43□□□□□ -0.42
CRTC3-209ENST00000560320 STX6O43752 255 aa12.43□□□□□ -0.42
CRTC3-209ENST00000560320 HLA-DOAP06340 250 aa12.43□□□□□ -0.42
CRTC3-209ENST00000560320 FGRP09769 529 aa12.43□□□□□ -0.42
CRTC3-209ENST00000560320 CYP2D6P10635 497 aa12.43□□□□□ -0.42
CRTC3-209ENST00000560320 RGS19P49795 217 aa12.43□□□□□ -0.42
CRTC3-209ENST00000560320 METAP2P50579 478 aaKnown RBP eCLIP12.43□□□□□ -0.42
CRTC3-209ENST00000560320 RHBDL3P58872 404 aa12.43□□□□□ -0.42
CRTC3-209ENST00000560320 CCT2P78371 535 aaKnown RBP12.43□□□□□ -0.42
CRTC3-209ENST00000560320 SCRN1Q12765 414 aa12.43□□□□□ -0.42
CRTC3-209ENST00000560320 LARP1BQ659C4 914 aaKnown RBP12.43□□□□□ -0.42
CRTC3-209ENST00000560320 RSBN1LQ6PCB5 846 aaPredicted RBP12.43□□□□□ -0.42
CRTC3-209ENST00000560320 SGMS1Q86VZ5 419 aa12.43□□□□□ -0.42
CRTC3-209ENST00000560320 ZNF444Q8N0Y2 327 aaPredicted RBP12.43□□□□□ -0.42
CRTC3-209ENST00000560320 IGDCC4Q8TDY8 1250 aa12.43□□□□□ -0.42
CRTC3-209ENST00000560320 ABHD8Q96I13 439 aa12.43□□□□□ -0.42
CRTC3-209ENST00000560320 INCENPQ9NQS7 918 aa12.43□□□□□ -0.42
CRTC3-209ENST00000560320 KCNQ5Q9NR82 932 aa12.43□□□□□ -0.42
CRTC3-209ENST00000560320 TMOD2Q9NZR1 351 aa12.43□□□□□ -0.42
CRTC3-209ENST00000560320 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.43□□□□□ -0.42
CRTC3-209ENST00000560320 CCDC196A0A1B0GTZ2 297 aa12.42□□□□□ -0.42
CRTC3-209ENST00000560320 GOLGA8AA7E2F4 631 aa12.42□□□□□ -0.42
CRTC3-209ENST00000560320 YDJCA8MPS7 323 aa12.42□□□□□ -0.42
CRTC3-209ENST00000560320 FOXN1O15353 648 aa12.42□□□□□ -0.42
CRTC3-209ENST00000560320 BRD1O95696 1058 aa12.42□□□□□ -0.42
CRTC3-209ENST00000560320 MCM4P33991 863 aa12.42□□□□□ -0.42
CRTC3-209ENST00000560320 PICALMQ13492 652 aa12.42□□□□□ -0.42
CRTC3-209ENST00000560320 TNIP1Q15025 636 aa12.42□□□□□ -0.42
CRTC3-209ENST00000560320 CDC42EP5Q6NZY7 148 aa12.42□□□□□ -0.42
CRTC3-209ENST00000560320 OGFOD1Q8N543 542 aa12.42□□□□□ -0.42
CRTC3-209ENST00000560320 ZSCAN10Q96SZ4 725 aaPredicted RBP12.42□□□□□ -0.42
CRTC3-209ENST00000560320 LY9Q9HBG7 655 aa12.42□□□□□ -0.42
CRTC3-209ENST00000560320 GPHNQ9NQX3 736 aaPredicted RBP12.42□□□□□ -0.42
CRTC3-209ENST00000560320 MKRN1Q9UHC7 482 aaKnown RBP12.42□□□□□ -0.42
CRTC3-209ENST00000560320 BRPF3Q9ULD4 1205 aa12.42□□□□□ -0.42
CRTC3-209ENST00000560320 TCHHQ07283 1943 aa12.42□□□□□ -0.42
CRTC3-209ENST00000560320 TNKSO95271 1327 aa12.41□□□□□ -0.42
CRTC3-209ENST00000560320 LTBP3Q9NS15 1303 aa12.41□□□□□ -0.42
CRTC3-209ENST00000560320 PTPDC1A2A3K4 754 aa12.41□□□□□ -0.42
CRTC3-209ENST00000560320 VPS37CA5D8V6 355 aaPredicted RBP12.41□□□□□ -0.42
CRTC3-209ENST00000560320 H3BQV1 296 aa12.41□□□□□ -0.42
CRTC3-209ENST00000560320 PSMD14O00487 310 aa12.41□□□□□ -0.42
CRTC3-209ENST00000560320 PRDM1O75626 825 aa12.41□□□□□ -0.42
CRTC3-209ENST00000560320 RAD17O75943 681 aa12.41□□□□□ -0.42
CRTC3-209ENST00000560320 VIL1P09327 827 aaKnown RBP12.41□□□□□ -0.42
CRTC3-209ENST00000560320 CALM1P0DP23 149 aa12.41□□□□□ -0.42
CRTC3-209ENST00000560320 CALM2P0DP24 149 aa12.41□□□□□ -0.42
CRTC3-209ENST00000560320 CALM3P0DP25 149 aa12.41□□□□□ -0.42
CRTC3-209ENST00000560320 ZSCAN22P10073 491 aaPredicted RBP12.41□□□□□ -0.42
CRTC3-209ENST00000560320 SYT1P21579 422 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms