RNA–Protein interactions for RNA: ENST00000560055.5

RPL28-209, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-209ENST00000560055 GPAA1O43292 621 aa20.25■□□□□ 0.83
RPL28-209ENST00000560055 MAP2K2P36507 400 aa20.25■□□□□ 0.83
RPL28-209ENST00000560055 TTC22Q5TAA0 569 aa20.25■□□□□ 0.83
RPL28-209ENST00000560055 SEC62Q99442 399 aaKnown RBP20.25■□□□□ 0.83
RPL28-209ENST00000560055 ATP8A2Q9NTI2 1148 aa20.25■□□□□ 0.83
RPL28-209ENST00000560055 SAP30BPQ9UHR5 308 aaKnown RBP20.25■□□□□ 0.83
RPL28-209ENST00000560055 TSKSQ9UJT2 592 aa20.25■□□□□ 0.83
RPL28-209ENST00000560055 INPP5BP32019 993 aa20.24■□□□□ 0.83
RPL28-209ENST00000560055 SLC10A4Q96EP9 437 aa20.24■□□□□ 0.83
RPL28-209ENST00000560055 DNAJC18Q9H819 358 aa20.24■□□□□ 0.83
RPL28-209ENST00000560055 HERC5Q9UII4 1024 aaKnown RBP20.24■□□□□ 0.83
RPL28-209ENST00000560055 CSADQ9Y600 493 aa20.24■□□□□ 0.83
RPL28-209ENST00000560055 SNCAIPQ9Y6H5 919 aa20.24■□□□□ 0.83
RPL28-209ENST00000560055 NOL9Q5SY16 702 aaKnown RBP20.23■□□□□ 0.83
RPL28-209ENST00000560055 SPRYD7Q5W111 196 aa20.23■□□□□ 0.83
RPL28-209ENST00000560055 FOXP4Q8IVH2 680 aaPredicted RBP20.23■□□□□ 0.83
RPL28-209ENST00000560055 NAV1Q8NEY1 1877 aa20.23■□□□□ 0.83
RPL28-209ENST00000560055 ZKSCAN4Q969J2 545 aaPredicted RBP20.23■□□□□ 0.83
RPL28-209ENST00000560055 RILPL2Q969X0 211 aa20.23■□□□□ 0.83
RPL28-209ENST00000560055 WNK4Q96J92 1243 aa20.23■□□□□ 0.83
RPL28-209ENST00000560055 EHD4Q9H223 541 aa20.23■□□□□ 0.83
RPL28-209ENST00000560055 SLC4A4Q9Y6R1 1079 aa20.23■□□□□ 0.83
RPL28-209ENST00000560055 MYH1P12882 1939 aa20.23■□□□□ 0.83
RPL28-209ENST00000560055 FAM196BA6NMK8 535 aa20.22■□□□□ 0.83
RPL28-209ENST00000560055 GSG1L2A8MUP6 293 aa20.22■□□□□ 0.83
RPL28-209ENST00000560055 HLA-DOAP06340 250 aa20.22■□□□□ 0.83
RPL28-209ENST00000560055 ZBTB48P10074 688 aaPredicted RBP20.22■□□□□ 0.83
RPL28-209ENST00000560055 GJA5P36382 358 aa20.22■□□□□ 0.83
RPL28-209ENST00000560055 ELP3Q9H9T3 547 aa20.22■□□□□ 0.83
RPL28-209ENST00000560055 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.22■□□□□ 0.83
RPL28-209ENST00000560055 MCM9Q9NXL9 1143 aa20.22■□□□□ 0.83
RPL28-209ENST00000560055 PPP4R2Q9NY27 417 aa20.22■□□□□ 0.83
RPL28-209ENST00000560055 SPDYE5A6NIY4 337 aa20.21■□□□□ 0.83
RPL28-209ENST00000560055 SDSP20132 328 aa20.21■□□□□ 0.83
RPL28-209ENST00000560055 PLCD1P51178 756 aa20.21■□□□□ 0.83
RPL28-209ENST00000560055 SLC4A8Q2Y0W8 1093 aa20.21■□□□□ 0.83
RPL28-209ENST00000560055 GIMAP6Q6P9H5 292 aa20.21■□□□□ 0.83
RPL28-209ENST00000560055 TTC6Q86TZ1 520 aa20.21■□□□□ 0.83
RPL28-209ENST00000560055 SKAP1Q86WV1 359 aa20.21■□□□□ 0.83
RPL28-209ENST00000560055 FAM227BQ96M60 508 aa20.21■□□□□ 0.83
RPL28-209ENST00000560055 HELLSQ9NRZ9 838 aa20.21■□□□□ 0.83
RPL28-209ENST00000560055 A0A0D9SFI3 127 aa20.2■□□□□ 0.82
RPL28-209ENST00000560055 GNAT2P19087 354 aa20.2■□□□□ 0.82
RPL28-209ENST00000560055 KIF23Q02241 960 aaPredicted RBP20.2■□□□□ 0.82
RPL28-209ENST00000560055 EVX2Q03828 476 aa20.2■□□□□ 0.82
RPL28-209ENST00000560055 GABPAQ06546 454 aa20.2■□□□□ 0.82
RPL28-209ENST00000560055 RRP1BQ14684 758 aaKnown RBP20.2■□□□□ 0.82
RPL28-209ENST00000560055 CNKSR2Q8WXI2 1034 aa20.2■□□□□ 0.82
RPL28-209ENST00000560055 OPTNQ96CV9 577 aa20.2■□□□□ 0.82
RPL28-209ENST00000560055 BEGAINQ9BUH8 593 aa20.2■□□□□ 0.82
RPL28-209ENST00000560055 EPB41L4AQ9HCS5 686 aaPredicted RBP20.2■□□□□ 0.82
RPL28-209ENST00000560055 SERPINB13Q9UIV8 391 aa20.2■□□□□ 0.82
RPL28-209ENST00000560055 CTNND1O60716 968 aaKnown RBP20.19■□□□□ 0.82
RPL28-209ENST00000560055 POLR3DP05423 398 aaPredicted RBP20.19■□□□□ 0.82
RPL28-209ENST00000560055 NMIQ13287 307 aaPredicted RBP20.19■□□□□ 0.82
RPL28-209ENST00000560055 ERO1BQ86YB8 467 aa20.19■□□□□ 0.82
RPL28-209ENST00000560055 SCYL3Q8IZE3 742 aa20.19■□□□□ 0.82
RPL28-209ENST00000560055 LAMB1P07942 1786 aa20.18■□□□□ 0.82
RPL28-209ENST00000560055 FOXP2O15409 715 aa20.18■□□□□ 0.82
RPL28-209ENST00000560055 CYP2D6P10635 497 aa20.18■□□□□ 0.82
RPL28-209ENST00000560055 MKRN3Q13064 507 aaKnown RBP20.18■□□□□ 0.82
RPL28-209ENST00000560055 MCMDC2Q4G0Z9 681 aa20.18■□□□□ 0.82
RPL28-209ENST00000560055 CCDC129Q6ZRS4 1044 aa20.18■□□□□ 0.82
RPL28-209ENST00000560055 CRACR2BQ8N4Y2 399 aaPredicted RBP20.18■□□□□ 0.82
RPL28-209ENST00000560055 TAOK2Q9UL54 1235 aa20.18■□□□□ 0.82
RPL28-209ENST00000560055 BAZ2AQ9UIF9 1905 aaKnown RBP20.17■□□□□ 0.82
RPL28-209ENST00000560055 PATL2C9JE40 543 aaKnown RBP20.17■□□□□ 0.82
RPL28-209ENST00000560055 USP17L12C9JPN9 530 aa20.17■□□□□ 0.82
RPL28-209ENST00000560055 USP17L21D6R901 530 aa20.17■□□□□ 0.82
RPL28-209ENST00000560055 CAP2P40123 477 aa20.17■□□□□ 0.82
RPL28-209ENST00000560055 PPATQ06203 517 aa20.17■□□□□ 0.82
RPL28-209ENST00000560055 C12orf60Q5U649 245 aa20.17■□□□□ 0.82
RPL28-209ENST00000560055 TATDN1Q6P1N9 297 aa20.17■□□□□ 0.82
RPL28-209ENST00000560055 CTR9Q6PD62 1173 aa20.17■□□□□ 0.82
RPL28-209ENST00000560055 REM2Q8IYK8 340 aaPredicted RBP20.17■□□□□ 0.82
RPL28-209ENST00000560055 DDRGK1Q96HY6 314 aa20.17■□□□□ 0.82
RPL28-209ENST00000560055 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.17■□□□□ 0.82
RPL28-209ENST00000560055 ARPP21Q9UBL0 812 aaPredicted RBP20.17■□□□□ 0.82
RPL28-209ENST00000560055 CYP2D7A0A087X1C5 515 aa20.16■□□□□ 0.82
RPL28-209ENST00000560055 SMIM22K7EJ46 135 aa20.16■□□□□ 0.82
RPL28-209ENST00000560055 HIP1O00291 1037 aa20.16■□□□□ 0.82
RPL28-209ENST00000560055 PTPRAP18433 802 aa20.16■□□□□ 0.82
RPL28-209ENST00000560055 PPIL2Q13356 520 aa20.16■□□□□ 0.82
RPL28-209ENST00000560055 SBK1Q52WX2 424 aa20.16■□□□□ 0.82
RPL28-209ENST00000560055 ZNF589Q86UQ0 364 aaPredicted RBP20.16■□□□□ 0.82
RPL28-209ENST00000560055 OTUD5Q96G74 571 aa20.16■□□□□ 0.82
RPL28-209ENST00000560055 MS4A4AQ96JQ5 239 aa20.16■□□□□ 0.82
RPL28-209ENST00000560055 TRIM34Q9BYJ4 488 aa20.16■□□□□ 0.82
RPL28-209ENST00000560055 DOCK1Q14185 1865 aa20.16■□□□□ 0.82
RPL28-209ENST00000560055 CASP8AP2Q9UKL3 1982 aa20.15■□□□□ 0.82
RPL28-209ENST00000560055 MANSC4A6NHS7 340 aaPredicted RBP20.15■□□□□ 0.82
RPL28-209ENST00000560055 IRF6O14896 467 aa20.15■□□□□ 0.82
RPL28-209ENST00000560055 SHMT1P34896 483 aa20.15■□□□□ 0.82
RPL28-209ENST00000560055 TM4SF4P48230 202 aa20.15■□□□□ 0.82
RPL28-209ENST00000560055 VPS53Q5VIR6 699 aa20.15■□□□□ 0.82
RPL28-209ENST00000560055 IFNL3Q8IZI9 196 aa20.15■□□□□ 0.82
RPL28-209ENST00000560055 PICK1Q9NRD5 415 aa20.15■□□□□ 0.82
RPL28-209ENST00000560055 CCDC171Q6TFL3 1326 aa20.14■□□□□ 0.81
RPL28-209ENST00000560055 TESPA1A2RU30 521 aaPredicted RBP20.14■□□□□ 0.81
RPL28-209ENST00000560055 JAG1P78504 1218 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms