RNA–Protein interactions for RNA: ENST00000559566.5

SHF-205, Transcript of Src homology 2 domain containing F, humanhuman

TSL 1 (best)

Gene SHF, Length 884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-205ENST00000559566 OPTNQ96CV9 577 aa23.5■■□□□ 1.35
SHF-205ENST00000559566 STRBPQ96SI9 672 aaKnown RBP23.5■■□□□ 1.35
SHF-205ENST00000559566 DHX36Q9H2U1 1008 aaKnown RBP23.5■■□□□ 1.35
SHF-205ENST00000559566 WBP1LQ9NX94 342 aa23.5■■□□□ 1.35
SHF-205ENST00000559566 NEFLP07196 543 aa23.49■■□□□ 1.35
SHF-205ENST00000559566 GSPT1P15170 499 aaKnown RBP23.49■■□□□ 1.35
SHF-205ENST00000559566 PLCD1P51178 756 aa23.49■■□□□ 1.35
SHF-205ENST00000559566 METTL16Q86W50 562 aaKnown RBP23.49■■□□□ 1.35
SHF-205ENST00000559566 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.49■■□□□ 1.35
SHF-205ENST00000559566 PI4KBQ9UBF8 816 aa23.49■■□□□ 1.35
SHF-205ENST00000559566 CSADQ9Y600 493 aa23.49■■□□□ 1.35
SHF-205ENST00000559566 SPDYE5A6NIY4 337 aa23.48■■□□□ 1.35
SHF-205ENST00000559566 TRIM6-TRIM34B2RNG4 842 aa23.48■■□□□ 1.35
SHF-205ENST00000559566 GPAA1O43292 621 aa23.48■■□□□ 1.35
SHF-205ENST00000559566 SHROOM1Q2M3G4 852 aaPredicted RBP23.48■■□□□ 1.35
SHF-205ENST00000559566 NOL9Q5SY16 702 aaKnown RBP23.48■■□□□ 1.35
SHF-205ENST00000559566 CENPQQ7L2Z9 268 aaPredicted RBP23.48■■□□□ 1.35
SHF-205ENST00000559566 RILPL2Q969X0 211 aa23.48■■□□□ 1.35
SHF-205ENST00000559566 SLC4A4Q9Y6R1 1079 aa23.48■■□□□ 1.35
SHF-205ENST00000559566 AK9Q5TCS8 1911 aa23.47■■□□□ 1.35
SHF-205ENST00000559566 JAG1P78504 1218 aa23.47■■□□□ 1.35
SHF-205ENST00000559566 CCDC129Q6ZRS4 1044 aa23.47■■□□□ 1.35
SHF-205ENST00000559566 CCDC84Q86UT8 332 aaPredicted RBP23.47■■□□□ 1.35
SHF-205ENST00000559566 OTUD5Q96G74 571 aa23.47■■□□□ 1.35
SHF-205ENST00000559566 FAM227BQ96M60 508 aa23.47■■□□□ 1.35
SHF-205ENST00000559566 CYP2D7A0A087X1C5 515 aa23.46■■□□□ 1.35
SHF-205ENST00000559566 TTC22Q5TAA0 569 aa23.46■■□□□ 1.35
SHF-205ENST00000559566 NAV1Q8NEY1 1877 aa23.46■■□□□ 1.35
SHF-205ENST00000559566 EPB41L4AQ9HCS5 686 aaPredicted RBP23.46■■□□□ 1.35
SHF-205ENST00000559566 MCM9Q9NXL9 1143 aa23.46■■□□□ 1.35
SHF-205ENST00000559566 A0A0D9SFI3 127 aa23.45■■□□□ 1.34
SHF-205ENST00000559566 GSG1L2A8MUP6 293 aa23.45■■□□□ 1.34
SHF-205ENST00000559566 FOXN1O15353 648 aa23.45■■□□□ 1.34
SHF-205ENST00000559566 FOXP2O15409 715 aa23.45■■□□□ 1.34
SHF-205ENST00000559566 ZBTB48P10074 688 aaPredicted RBP23.45■■□□□ 1.34
SHF-205ENST00000559566 MAP2K1Q02750 393 aaPredicted RBP23.45■■□□□ 1.34
SHF-205ENST00000559566 SCYL3Q8IZE3 742 aa23.45■■□□□ 1.34
SHF-205ENST00000559566 CCDC136Q96JN2 1154 aa23.45■■□□□ 1.34
SHF-205ENST00000559566 HERC5Q9UII4 1024 aaKnown RBP23.45■■□□□ 1.34
SHF-205ENST00000559566 POLR3DP05423 398 aaPredicted RBP23.44■■□□□ 1.34
SHF-205ENST00000559566 HLA-DOAP06340 250 aa23.44■■□□□ 1.34
SHF-205ENST00000559566 ERO1BQ86YB8 467 aa23.44■■□□□ 1.34
SHF-205ENST00000559566 FOXP4Q8IVH2 680 aaPredicted RBP23.44■■□□□ 1.34
SHF-205ENST00000559566 MS4A4AQ96JQ5 239 aa23.44■■□□□ 1.34
SHF-205ENST00000559566 ATP8A2Q9NTI2 1148 aa23.44■■□□□ 1.34
SHF-205ENST00000559566 IRF6O14896 467 aa23.43■■□□□ 1.34
SHF-205ENST00000559566 CTNND1O60716 968 aaKnown RBP23.43■■□□□ 1.34
SHF-205ENST00000559566 GABPAQ06546 454 aa23.43■■□□□ 1.34
SHF-205ENST00000559566 NMIQ13287 307 aaPredicted RBP23.43■■□□□ 1.34
SHF-205ENST00000559566 LRRFIP1Q32MZ4 808 aaKnown RBP23.43■■□□□ 1.34
SHF-205ENST00000559566 CRACR2BQ8N4Y2 399 aaPredicted RBP23.43■■□□□ 1.34
SHF-205ENST00000559566 EHD4Q9H223 541 aa23.43■■□□□ 1.34
SHF-205ENST00000559566 TSKSQ9UJT2 592 aa23.43■■□□□ 1.34
SHF-205ENST00000559566 MYH1P12882 1939 aa23.43■■□□□ 1.34
SHF-205ENST00000559566 USP17L12C9JPN9 530 aa23.42■■□□□ 1.34
SHF-205ENST00000559566 USP17L21D6R901 530 aa23.42■■□□□ 1.34
SHF-205ENST00000559566 PTPRAP18433 802 aa23.42■■□□□ 1.34
SHF-205ENST00000559566 SDSP20132 328 aa23.42■■□□□ 1.34
SHF-205ENST00000559566 CAP2P40123 477 aa23.42■■□□□ 1.34
SHF-205ENST00000559566 TM4SF4P48230 202 aa23.42■■□□□ 1.34
SHF-205ENST00000559566 TTC6Q86TZ1 520 aa23.42■■□□□ 1.34
SHF-205ENST00000559566 SLC44A5Q8NCS7 719 aa23.42■■□□□ 1.34
SHF-205ENST00000559566 DYNLL2Q96FJ2 89 aa23.42■■□□□ 1.34
SHF-205ENST00000559566 PTPN18Q99952 460 aa23.42■■□□□ 1.34
SHF-205ENST00000559566 SERPINB13Q9UIV8 391 aa23.42■■□□□ 1.34
SHF-205ENST00000559566 GDF11O95390 407 aa23.41■■□□□ 1.34
SHF-205ENST00000559566 SHMT1P34896 483 aa23.41■■□□□ 1.34
SHF-205ENST00000559566 PPIL2Q13356 520 aa23.41■■□□□ 1.34
SHF-205ENST00000559566 VPS53Q5VIR6 699 aa23.41■■□□□ 1.34
SHF-205ENST00000559566 CTR9Q6PD62 1173 aa23.41■■□□□ 1.34
SHF-205ENST00000559566 ZNF589Q86UQ0 364 aaPredicted RBP23.41■■□□□ 1.34
SHF-205ENST00000559566 MANSC4A6NHS7 340 aaPredicted RBP23.4■■□□□ 1.34
SHF-205ENST00000559566 IGF2BP3O00425 579 aaKnown RBP eCLIP23.4■■□□□ 1.34
SHF-205ENST00000559566 PPATQ06203 517 aa23.4■■□□□ 1.34
SHF-205ENST00000559566 C12orf60Q5U649 245 aa23.4■■□□□ 1.34
SHF-205ENST00000559566 TATDN1Q6P1N9 297 aa23.4■■□□□ 1.34
SHF-205ENST00000559566 BRI3BPQ8WY22 251 aa23.4■■□□□ 1.34
SHF-205ENST00000559566 RNF186Q9NXI6 227 aa23.4■■□□□ 1.34
SHF-205ENST00000559566 TESPA1A2RU30 521 aaPredicted RBP23.39■■□□□ 1.33
SHF-205ENST00000559566 PICK1Q9NRD5 415 aa23.39■■□□□ 1.33
SHF-205ENST00000559566 HELLSQ9NRZ9 838 aa23.39■■□□□ 1.33
SHF-205ENST00000559566 ZHX2Q9Y6X8 837 aa23.39■■□□□ 1.33
SHF-205ENST00000559566 DOCK1Q14185 1865 aa23.39■■□□□ 1.33
SHF-205ENST00000559566 PATL2C9JE40 543 aaKnown RBP23.38■■□□□ 1.33
SHF-205ENST00000559566 HSPA8P11142 646 aaKnown RBP23.38■■□□□ 1.33
SHF-205ENST00000559566 TRIM34Q9BYJ4 488 aa23.38■■□□□ 1.33
SHF-205ENST00000559566 IL25Q9H293 177 aa23.38■■□□□ 1.33
SHF-205ENST00000559566 KCNH4Q9UQ05 1017 aa23.38■■□□□ 1.33
SHF-205ENST00000559566 BAZ2AQ9UIF9 1905 aaKnown RBP23.37■■□□□ 1.33
SHF-205ENST00000559566 LAMB1P07942 1786 aa23.37■■□□□ 1.33
SHF-205ENST00000559566 TRPA1O75762 1119 aa23.37■■□□□ 1.33
SHF-205ENST00000559566 GNAT2P19087 354 aa23.37■■□□□ 1.33
SHF-205ENST00000559566 SREBF2Q12772 1141 aa23.37■■□□□ 1.33
SHF-205ENST00000559566 MOGSQ13724 837 aa23.37■■□□□ 1.33
SHF-205ENST00000559566 MCMDC2Q4G0Z9 681 aa23.37■■□□□ 1.33
SHF-205ENST00000559566 GIMAP6Q6P9H5 292 aa23.37■■□□□ 1.33
SHF-205ENST00000559566 IFNL1Q8IU54 200 aa23.37■■□□□ 1.33
SHF-205ENST00000559566 IFNL3Q8IZI9 196 aa23.37■■□□□ 1.33
SHF-205ENST00000559566 AFG3L2Q9Y4W6 797 aa23.37■■□□□ 1.33
SHF-205ENST00000559566 CCL15-CCL14A0A0B4J2E2 113 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms