RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 CRNKL1Q9BZJ0 848 aaKnown RBP5.28□□□□□ -1.56
SNX1-205ENST00000559339 ZFYVE28Q9HCC9 887 aa5.28□□□□□ -1.56
SNX1-205ENST00000559339 ZNF112Q9UJU3 913 aa5.28□□□□□ -1.56
SNX1-205ENST00000559339 SNCAIPQ9Y6H5 919 aa5.28□□□□□ -1.56
SNX1-205ENST00000559339 ZHX2Q9Y6X8 837 aa5.28□□□□□ -1.56
SNX1-205ENST00000559339 ARAP2Q8WZ64 1704 aa5.28□□□□□ -1.56
SNX1-205ENST00000559339 ATRNL1Q5VV63 1379 aa5.28□□□□□ -1.56
SNX1-205ENST00000559339 ZNF646O15015 1829 aaPredicted RBP5.27□□□□□ -1.57
SNX1-205ENST00000559339 ZNF532Q9HCE3 1301 aa5.27□□□□□ -1.57
SNX1-205ENST00000559339 PHF20L1A8MW92 1017 aa5.27□□□□□ -1.57
SNX1-205ENST00000559339 GPR25O00155 361 aa5.27□□□□□ -1.57
SNX1-205ENST00000559339 FKTNO75072 461 aa5.27□□□□□ -1.57
SNX1-205ENST00000559339 POLR3DP05423 398 aaPredicted RBP5.27□□□□□ -1.57
SNX1-205ENST00000559339 ZFYP08048 801 aaPredicted RBP5.27□□□□□ -1.57
SNX1-205ENST00000559339 ASNSP08243 561 aa5.27□□□□□ -1.57
SNX1-205ENST00000559339 PTPRAP18433 802 aa5.27□□□□□ -1.57
SNX1-205ENST00000559339 MX1P20591 662 aa5.27□□□□□ -1.57
SNX1-205ENST00000559339 ADD2P35612 726 aa5.27□□□□□ -1.57
SNX1-205ENST00000559339 DYNLL1P63167 89 aaKnown RBP5.27□□□□□ -1.57
SNX1-205ENST00000559339 MAP3K10Q02779 954 aa5.27□□□□□ -1.57
SNX1-205ENST00000559339 UBE3CQ15386 1083 aa5.27□□□□□ -1.57
SNX1-205ENST00000559339 TAF1CQ15572 869 aaPredicted RBP5.27□□□□□ -1.57
SNX1-205ENST00000559339 SH3BP5LQ7L8J4 393 aa5.27□□□□□ -1.57
SNX1-205ENST00000559339 ADGRA1Q86SQ6 560 aa5.27□□□□□ -1.57
SNX1-205ENST00000559339 MS4A4AQ96JQ5 239 aa5.27□□□□□ -1.57
SNX1-205ENST00000559339 AS3MTQ9HBK9 375 aa5.27□□□□□ -1.57
SNX1-205ENST00000559339 ZCCHC17Q9NP64 241 aaKnown RBP5.27□□□□□ -1.57
SNX1-205ENST00000559339 GINM1Q9NU53 330 aa5.27□□□□□ -1.57
SNX1-205ENST00000559339 MCM9Q9NXL9 1143 aa5.27□□□□□ -1.57
SNX1-205ENST00000559339 SERPINB13Q9UIV8 391 aa5.27□□□□□ -1.57
SNX1-205ENST00000559339 PALD1Q9ULE6 856 aa5.27□□□□□ -1.57
SNX1-205ENST00000559339 RFX7Q2KHR2 1363 aa5.27□□□□□ -1.57
SNX1-205ENST00000559339 THSD7BQ9C0I4 1608 aa5.26□□□□□ -1.57
SNX1-205ENST00000559339 COL2A1P02458 1487 aaPredicted RBP5.26□□□□□ -1.57
SNX1-205ENST00000559339 ECM29Q5VYK3 1845 aa5.26□□□□□ -1.57
SNX1-205ENST00000559339 TRIM75PA6NK02 468 aa5.26□□□□□ -1.57
SNX1-205ENST00000559339 USP17L5A8MUK1 530 aa5.26□□□□□ -1.57
SNX1-205ENST00000559339 IGF2BP3O00425 579 aaKnown RBP eCLIP5.26□□□□□ -1.57
SNX1-205ENST00000559339 TLR2O60603 784 aa5.26□□□□□ -1.57
SNX1-205ENST00000559339 GNAT2P19087 354 aa5.26□□□□□ -1.57
SNX1-205ENST00000559339 GJA5P36382 358 aa5.26□□□□□ -1.57
SNX1-205ENST00000559339 CAP2P40123 477 aa5.26□□□□□ -1.57
SNX1-205ENST00000559339 SP3Q02447 781 aa5.26□□□□□ -1.57
SNX1-205ENST00000559339 PABPC4Q13310 644 aaKnown RBP eCLIP5.26□□□□□ -1.57
SNX1-205ENST00000559339 CRHR2Q13324 411 aa5.26□□□□□ -1.57
SNX1-205ENST00000559339 DGKZQ13574 1117 aa5.26□□□□□ -1.57
SNX1-205ENST00000559339 KIF22Q14807 665 aa5.26□□□□□ -1.57
SNX1-205ENST00000559339 CERKLQ49MI3 558 aaPredicted RBP5.26□□□□□ -1.57
SNX1-205ENST00000559339 CTU1Q7Z7A3 348 aaKnown RBP5.26□□□□□ -1.57
SNX1-205ENST00000559339 ANKRD23Q86SG2 305 aa5.26□□□□□ -1.57
SNX1-205ENST00000559339 KBTBD3Q8NAB2 608 aa5.26□□□□□ -1.57
SNX1-205ENST00000559339 ZNF280CQ8ND82 737 aa5.26□□□□□ -1.57
SNX1-205ENST00000559339 ZNF296Q8WUU4 475 aaPredicted RBP5.26□□□□□ -1.57
SNX1-205ENST00000559339 BRI3BPQ8WY22 251 aa5.26□□□□□ -1.57
SNX1-205ENST00000559339 EDC3Q96F86 508 aaKnown RBP5.26□□□□□ -1.57
SNX1-205ENST00000559339 ERO1AQ96HE7 468 aa5.26□□□□□ -1.57
SNX1-205ENST00000559339 PARK7Q99497 189 aaKnown RBP5.26□□□□□ -1.57
SNX1-205ENST00000559339 PTPN18Q99952 460 aa5.26□□□□□ -1.57
SNX1-205ENST00000559339 RIOK1Q9BRS2 568 aaKnown RBP5.26□□□□□ -1.57
SNX1-205ENST00000559339 EHD4Q9H223 541 aa5.26□□□□□ -1.57
SNX1-205ENST00000559339 CABP5Q9NP86 173 aa5.26□□□□□ -1.57
SNX1-205ENST00000559339 ATP8A2Q9NTI2 1148 aa5.26□□□□□ -1.57
SNX1-205ENST00000559339 SAP30BPQ9UHR5 308 aaKnown RBP5.26□□□□□ -1.57
SNX1-205ENST00000559339 TAOK2Q9UL54 1235 aa5.26□□□□□ -1.57
SNX1-205ENST00000559339 KCNH4Q9UQ05 1017 aa5.26□□□□□ -1.57
SNX1-205ENST00000559339 AFG3L2Q9Y4W6 797 aa5.26□□□□□ -1.57
SNX1-205ENST00000559339 MYH13Q9UKX3 1938 aa5.26□□□□□ -1.57
SNX1-205ENST00000559339 A0A0G2JLL6 359 aaPredicted RBP5.25□□□□□ -1.57
SNX1-205ENST00000559339 TCRBV5S4A2TA0A5A2 114 aa5.25□□□□□ -1.57
SNX1-205ENST00000559339 FAM196BA6NMK8 535 aa5.25□□□□□ -1.57
SNX1-205ENST00000559339 C19orf81C9J6K1 198 aa5.25□□□□□ -1.57
SNX1-205ENST00000559339 BTBD19C9JJ37 291 aa5.25□□□□□ -1.57
SNX1-205ENST00000559339 PDHXO00330 501 aa5.25□□□□□ -1.57
SNX1-205ENST00000559339 RNF113AO15541 343 aaKnown RBP5.25□□□□□ -1.57
SNX1-205ENST00000559339 MBD4O95243 580 aa5.25□□□□□ -1.57
SNX1-205ENST00000559339 APPP05067 770 aa5.25□□□□□ -1.57
SNX1-205ENST00000559339 SPP2Q13103 211 aa5.25□□□□□ -1.57
SNX1-205ENST00000559339 RAB3GAP1Q15042 981 aa5.25□□□□□ -1.57
SNX1-205ENST00000559339 SLC4A8Q2Y0W8 1093 aa5.25□□□□□ -1.57
SNX1-205ENST00000559339 TSHZ3Q63HK5 1081 aa5.25□□□□□ -1.57
SNX1-205ENST00000559339 B4GALNT3Q6L9W6 998 aa5.25□□□□□ -1.57
SNX1-205ENST00000559339 GADL1Q6ZQY3 521 aa5.25□□□□□ -1.57
SNX1-205ENST00000559339 PRRT2Q7Z6L0 340 aaPredicted RBP5.25□□□□□ -1.57
SNX1-205ENST00000559339 METTL16Q86W50 562 aaKnown RBP5.25□□□□□ -1.57
SNX1-205ENST00000559339 TICAM2Q86XR7 235 aa5.25□□□□□ -1.57
SNX1-205ENST00000559339 FAM43AQ8N2R8 423 aa5.25□□□□□ -1.57
SNX1-205ENST00000559339 EXOC6Q8TAG9 804 aa5.25□□□□□ -1.57
SNX1-205ENST00000559339 SMCR8Q8TEV9 937 aaPredicted RBP5.25□□□□□ -1.57
SNX1-205ENST00000559339 SDR42E1Q8WUS8 393 aa5.25□□□□□ -1.57
SNX1-205ENST00000559339 APPBP2Q92624 585 aa5.25□□□□□ -1.57
SNX1-205ENST00000559339 EVI5LQ96CN4 794 aa5.25□□□□□ -1.57
SNX1-205ENST00000559339 ABHD8Q96I13 439 aa5.25□□□□□ -1.57
SNX1-205ENST00000559339 FSD1Q9BTV5 496 aa5.25□□□□□ -1.57
SNX1-205ENST00000559339 NACAP1Q9BZK3 213 aa5.25□□□□□ -1.57
SNX1-205ENST00000559339 MCOLN1Q9GZU1 580 aa5.25□□□□□ -1.57
SNX1-205ENST00000559339 ARMT1Q9H993 441 aa5.25□□□□□ -1.57
SNX1-205ENST00000559339 ZNF287Q9HBT7 754 aa5.25□□□□□ -1.57
SNX1-205ENST00000559339 DCP1AQ9NPI6 582 aaPredicted RBP5.25□□□□□ -1.57
SNX1-205ENST00000559339 TMOD4Q9NZQ9 345 aa5.25□□□□□ -1.57
SNX1-205ENST00000559339 SWAP70Q9UH65 585 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms