RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 TSKSQ9UJT2 592 aa22.58■■□□□ 1.21
CASC4-209ENST00000559222 CYP2D6P10635 497 aa22.57■■□□□ 1.2
CASC4-209ENST00000559222 ZSCAN25Q6NSZ9 544 aa22.57■■□□□ 1.2
CASC4-209ENST00000559222 CCDC84Q86UT8 332 aaPredicted RBP22.57■■□□□ 1.2
CASC4-209ENST00000559222 APPBP2Q92624 585 aa22.57■■□□□ 1.2
CASC4-209ENST00000559222 OTUD5Q96G74 571 aa22.57■■□□□ 1.2
CASC4-209ENST00000559222 CRNKL1Q9BZJ0 848 aaKnown RBP22.57■■□□□ 1.2
CASC4-209ENST00000559222 CSADQ9Y600 493 aa22.57■■□□□ 1.2
CASC4-209ENST00000559222 UNCXA6NJT0 531 aa22.56■■□□□ 1.2
CASC4-209ENST00000559222 CERS3Q8IU89 383 aa22.56■■□□□ 1.2
CASC4-209ENST00000559222 OSBPL3Q9H4L5 887 aa22.56■■□□□ 1.2
CASC4-209ENST00000559222 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.56■■□□□ 1.2
CASC4-209ENST00000559222 DCP1AQ9NPI6 582 aaPredicted RBP22.56■■□□□ 1.2
CASC4-209ENST00000559222 PTPRFP10586 1907 aa22.56■■□□□ 1.2
CASC4-209ENST00000559222 SPDYE5A6NIY4 337 aa22.55■■□□□ 1.2
CASC4-209ENST00000559222 PLCD1P51178 756 aa22.55■■□□□ 1.2
CASC4-209ENST00000559222 JAG1P78504 1218 aa22.55■■□□□ 1.2
CASC4-209ENST00000559222 MAP2K1Q02750 393 aaPredicted RBP22.55■■□□□ 1.2
CASC4-209ENST00000559222 NOL9Q5SY16 702 aaKnown RBP22.55■■□□□ 1.2
CASC4-209ENST00000559222 AIDAQ96BJ3 306 aa22.55■■□□□ 1.2
CASC4-209ENST00000559222 CYP2D7A0A087X1C5 515 aa22.54■■□□□ 1.2
CASC4-209ENST00000559222 TBC1D12O60347 775 aa22.54■■□□□ 1.2
CASC4-209ENST00000559222 CAPN15O75808 1086 aa22.54■■□□□ 1.2
CASC4-209ENST00000559222 CENPBP07199 599 aaPredicted RBP22.54■■□□□ 1.2
CASC4-209ENST00000559222 ZMYM1Q5SVZ6 1142 aa22.54■■□□□ 1.2
CASC4-209ENST00000559222 EVI5LQ96CN4 794 aa22.54■■□□□ 1.2
CASC4-209ENST00000559222 STRBPQ96SI9 672 aaKnown RBP22.54■■□□□ 1.2
CASC4-209ENST00000559222 DHX36Q9H2U1 1008 aaKnown RBP22.54■■□□□ 1.2
CASC4-209ENST00000559222 PI4KBQ9UBF8 816 aa22.54■■□□□ 1.2
CASC4-209ENST00000559222 MYH8P13535 1937 aa22.54■■□□□ 1.2
CASC4-209ENST00000559222 ZBTB48P10074 688 aaPredicted RBP22.53■■□□□ 1.2
CASC4-209ENST00000559222 CCDC129Q6ZRS4 1044 aa22.53■■□□□ 1.2
CASC4-209ENST00000559222 METTL16Q86W50 562 aaKnown RBP22.53■■□□□ 1.2
CASC4-209ENST00000559222 SLC4A4Q9Y6R1 1079 aa22.53■■□□□ 1.2
CASC4-209ENST00000559222 TRIM6-TRIM34B2RNG4 842 aa22.52■■□□□ 1.2
CASC4-209ENST00000559222 GPAA1O43292 621 aa22.52■■□□□ 1.2
CASC4-209ENST00000559222 ZFYP08048 801 aaPredicted RBP22.52■■□□□ 1.2
CASC4-209ENST00000559222 GSPT1P15170 499 aaKnown RBP22.52■■□□□ 1.2
CASC4-209ENST00000559222 ERO1BQ86YB8 467 aa22.52■■□□□ 1.2
CASC4-209ENST00000559222 SCYL3Q8IZE3 742 aa22.52■■□□□ 1.2
CASC4-209ENST00000559222 RILPL2Q969X0 211 aa22.52■■□□□ 1.2
CASC4-209ENST00000559222 MS4A4AQ96JQ5 239 aa22.52■■□□□ 1.2
CASC4-209ENST00000559222 EPB41L4AQ9HCS5 686 aaPredicted RBP22.52■■□□□ 1.2
CASC4-209ENST00000559222 MCM9Q9NXL9 1143 aa22.52■■□□□ 1.2
CASC4-209ENST00000559222 IGF2BP3O00425 579 aaKnown RBP eCLIP22.51■■□□□ 1.19
CASC4-209ENST00000559222 IRF6O14896 467 aa22.51■■□□□ 1.19
CASC4-209ENST00000559222 HSPA8P11142 646 aaKnown RBP22.51■■□□□ 1.19
CASC4-209ENST00000559222 FAM227BQ96M60 508 aa22.51■■□□□ 1.19
CASC4-209ENST00000559222 RNF186Q9NXI6 227 aa22.51■■□□□ 1.19
CASC4-209ENST00000559222 HERC5Q9UII4 1024 aaKnown RBP22.51■■□□□ 1.19
CASC4-209ENST00000559222 A0A0D9SFI3 127 aa22.5■■□□□ 1.19
CASC4-209ENST00000559222 GSG1L2A8MUP6 293 aa22.5■■□□□ 1.19
CASC4-209ENST00000559222 GDF11O95390 407 aa22.5■■□□□ 1.19
CASC4-209ENST00000559222 HLA-DOAP06340 250 aa22.5■■□□□ 1.19
CASC4-209ENST00000559222 TNS4Q8IZW8 715 aa22.5■■□□□ 1.19
CASC4-209ENST00000559222 CRACR2BQ8N4Y2 399 aaPredicted RBP22.5■■□□□ 1.19
CASC4-209ENST00000559222 SLC44A5Q8NCS7 719 aa22.5■■□□□ 1.19
CASC4-209ENST00000559222 BRI3BPQ8WY22 251 aa22.5■■□□□ 1.19
CASC4-209ENST00000559222 PTPN18Q99952 460 aa22.5■■□□□ 1.19
CASC4-209ENST00000559222 FOXP2O15409 715 aa22.49■■□□□ 1.19
CASC4-209ENST00000559222 CTNND1O60716 968 aaKnown RBP22.49■■□□□ 1.19
CASC4-209ENST00000559222 POLR3DP05423 398 aaPredicted RBP22.49■■□□□ 1.19
CASC4-209ENST00000559222 PTPRAP18433 802 aa22.49■■□□□ 1.19
CASC4-209ENST00000559222 TM4SF4P48230 202 aa22.49■■□□□ 1.19
CASC4-209ENST00000559222 PPIL2Q13356 520 aa22.49■■□□□ 1.19
CASC4-209ENST00000559222 DYNLL2Q96FJ2 89 aa22.49■■□□□ 1.19
CASC4-209ENST00000559222 MANSC4A6NHS7 340 aaPredicted RBP22.48■■□□□ 1.19
CASC4-209ENST00000559222 TRPA1O75762 1119 aa22.48■■□□□ 1.19
CASC4-209ENST00000559222 NEFLP07196 543 aa22.48■■□□□ 1.19
CASC4-209ENST00000559222 SHMT1P34896 483 aa22.48■■□□□ 1.19
CASC4-209ENST00000559222 CAP2P40123 477 aa22.48■■□□□ 1.19
CASC4-209ENST00000559222 GABPAQ06546 454 aa22.48■■□□□ 1.19
CASC4-209ENST00000559222 NMIQ13287 307 aaPredicted RBP22.48■■□□□ 1.19
CASC4-209ENST00000559222 TTC22Q5TAA0 569 aa22.48■■□□□ 1.19
CASC4-209ENST00000559222 FOXP4Q8IVH2 680 aaPredicted RBP22.48■■□□□ 1.19
CASC4-209ENST00000559222 EHD4Q9H223 541 aa22.48■■□□□ 1.19
CASC4-209ENST00000559222 R3HDMLQ9H3Y0 253 aa22.48■■□□□ 1.19
CASC4-209ENST00000559222 ATP8A2Q9NTI2 1148 aa22.48■■□□□ 1.19
CASC4-209ENST00000559222 USP17L12C9JPN9 530 aa22.47■■□□□ 1.19
CASC4-209ENST00000559222 USP17L21D6R901 530 aa22.47■■□□□ 1.19
CASC4-209ENST00000559222 LBX1P52954 281 aa22.47■■□□□ 1.19
CASC4-209ENST00000559222 PPATQ06203 517 aa22.47■■□□□ 1.19
CASC4-209ENST00000559222 CTR9Q6PD62 1173 aa22.47■■□□□ 1.19
CASC4-209ENST00000559222 CENPQQ7L2Z9 268 aaPredicted RBP22.47■■□□□ 1.19
CASC4-209ENST00000559222 TTC6Q86TZ1 520 aa22.47■■□□□ 1.19
CASC4-209ENST00000559222 IFNL1Q8IU54 200 aa22.47■■□□□ 1.19
CASC4-209ENST00000559222 SERPINB13Q9UIV8 391 aa22.47■■□□□ 1.19
CASC4-209ENST00000559222 LOC285556D6RIA3 1793 aa22.46■■□□□ 1.19
CASC4-209ENST00000559222 CCL15-CCL14A0A0B4J2E2 113 aa22.46■■□□□ 1.19
CASC4-209ENST00000559222 TESPA1A2RU30 521 aaPredicted RBP22.46■■□□□ 1.19
CASC4-209ENST00000559222 SREBF2Q12772 1141 aa22.46■■□□□ 1.19
CASC4-209ENST00000559222 MOGSQ13724 837 aa22.46■■□□□ 1.19
CASC4-209ENST00000559222 CCL15Q16663 113 aa22.46■■□□□ 1.19
CASC4-209ENST00000559222 VPS53Q5VIR6 699 aa22.46■■□□□ 1.19
CASC4-209ENST00000559222 ZNF589Q86UQ0 364 aaPredicted RBP22.46■■□□□ 1.19
CASC4-209ENST00000559222 BEGAINQ9BUH8 593 aa22.46■■□□□ 1.19
CASC4-209ENST00000559222 TRIM34Q9BYJ4 488 aa22.46■■□□□ 1.19
CASC4-209ENST00000559222 PICK1Q9NRD5 415 aa22.46■■□□□ 1.19
CASC4-209ENST00000559222 ZHX2Q9Y6X8 837 aa22.46■■□□□ 1.19
CASC4-209ENST00000559222 CASP8AP2Q9UKL3 1982 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms