RNA–Protein interactions for RNA: ENST00000559193.5

SPG11-215, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 2,579 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-215ENST00000559193 KRT23Q9C075 422 aa19.06■□□□□ 0.64
SPG11-215ENST00000559193 FBXO2Q9UK22 296 aaPredicted RBP19.06■□□□□ 0.64
SPG11-215ENST00000559193 ETF1P62495 437 aaKnown RBP19.05■□□□□ 0.64
SPG11-215ENST00000559193 MFSD6Q6ZSS7 791 aa19.05■□□□□ 0.64
SPG11-215ENST00000559193 DZIP3Q86Y13 1208 aaKnown RBP19.05■□□□□ 0.64
SPG11-215ENST00000559193 ELOA2Q8IYF1 753 aaPredicted RBP19.05■□□□□ 0.64
SPG11-215ENST00000559193 ZNF34Q8IZ26 560 aa19.05■□□□□ 0.64
SPG11-215ENST00000559193 LCORLQ8N3X6 602 aa19.05■□□□□ 0.64
SPG11-215ENST00000559193 ZKSCAN3Q9BRR0 538 aa19.05■□□□□ 0.64
SPG11-215ENST00000559193 NHSL1Q5SYE7 1610 aa19.05■□□□□ 0.64
SPG11-215ENST00000559193 ERVV-1B6SEH8 477 aa19.05■□□□□ 0.64
SPG11-215ENST00000559193 TOP1P11387 765 aaKnown RBP19.05■□□□□ 0.64
SPG11-215ENST00000559193 RTN1Q16799 776 aa19.05■□□□□ 0.64
SPG11-215ENST00000559193 STAG1Q8WVM7 1258 aa19.05■□□□□ 0.64
SPG11-215ENST00000559193 MAN1B1Q9UKM7 699 aa19.05■□□□□ 0.64
SPG11-215ENST00000559193 PHLPP2Q6ZVD8 1323 aa19.04■□□□□ 0.64
SPG11-215ENST00000559193 NPHP1O15259 732 aa19.04■□□□□ 0.64
SPG11-215ENST00000559193 CCP110O43303 1012 aa19.04■□□□□ 0.64
SPG11-215ENST00000559193 PTPREP23469 700 aa19.04■□□□□ 0.64
SPG11-215ENST00000559193 ERCC6LQ2NKX8 1250 aa19.04■□□□□ 0.64
SPG11-215ENST00000559193 RRP12Q5JTH9 1297 aaKnown RBP19.04■□□□□ 0.64
SPG11-215ENST00000559193 TRIM65Q6PJ69 517 aa19.04■□□□□ 0.64
SPG11-215ENST00000559193 HOMER1Q86YM7 354 aa19.04■□□□□ 0.64
SPG11-215ENST00000559193 TMEM139Q8IV31 216 aa19.04■□□□□ 0.64
SPG11-215ENST00000559193 FAM53CQ9NYF3 392 aa19.04■□□□□ 0.64
SPG11-215ENST00000559193 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.04■□□□□ 0.647e-7■□□□□ 8.4
SPG11-215ENST00000559193 FANCGO15287 622 aa19.04■□□□□ 0.64
SPG11-215ENST00000559193 IGSF3O75054 1194 aa19.04■□□□□ 0.64
SPG11-215ENST00000559193 PRR29P0C7W0 189 aa19.04■□□□□ 0.64
SPG11-215ENST00000559193 POSTNQ15063 836 aa19.04■□□□□ 0.64
SPG11-215ENST00000559193 SAFBQ15424 915 aaKnown RBP eCLIP19.04■□□□□ 0.64
SPG11-215ENST00000559193 REXO1L1PQ8IX06 675 aa19.04■□□□□ 0.64
SPG11-215ENST00000559193 WTAPQ15007 396 aa19.03■□□□□ 0.64
SPG11-215ENST00000559193 UTP14AQ9BVJ6 771 aaKnown RBP19.03■□□□□ 0.64
SPG11-215ENST00000559193 FOXP1Q9H334 677 aaPredicted RBP19.03■□□□□ 0.64
SPG11-215ENST00000559193 ZNF446Q9NWS9 450 aa19.03■□□□□ 0.64
SPG11-215ENST00000559193 DNAI1Q9UI46 699 aa19.03■□□□□ 0.64
SPG11-215ENST00000559193 TDO2P48775 406 aa19.03■□□□□ 0.64
SPG11-215ENST00000559193 FMR1Q06787 632 aaKnown RBP eCLIP19.03■□□□□ 0.649e-6■■■■□ 20.6
SPG11-215ENST00000559193 TRIM22Q8IYM9 498 aa19.03■□□□□ 0.64
SPG11-215ENST00000559193 CMTR1Q8N1G2 835 aaKnown RBP19.03■□□□□ 0.64
SPG11-215ENST00000559193 TOMM22Q9NS69 142 aa19.03■□□□□ 0.64
SPG11-215ENST00000559193 SLC4A4Q9Y6R1 1079 aa19.03■□□□□ 0.64
SPG11-215ENST00000559193 PNPLA7Q6ZV29 1317 aa19.03■□□□□ 0.64
SPG11-215ENST00000559193 DISP2A7MBM2 1401 aa19.02■□□□□ 0.64
SPG11-215ENST00000559193 H2AFXP16104 143 aaPredicted RBP19.02■□□□□ 0.64
SPG11-215ENST00000559193 GABPB1Q06547 395 aaPredicted RBP19.02■□□□□ 0.64
SPG11-215ENST00000559193 NR5A1Q13285 461 aa19.02■□□□□ 0.64
SPG11-215ENST00000559193 HSP90AA4PQ58FG1 418 aa19.02■□□□□ 0.64
SPG11-215ENST00000559193 RILPL1Q5EBL4 403 aa19.02■□□□□ 0.64
SPG11-215ENST00000559193 NT5DC1Q5TFE4 455 aa19.02■□□□□ 0.64
SPG11-215ENST00000559193 KRT222Q8N1A0 295 aa19.02■□□□□ 0.64
SPG11-215ENST00000559193 SERTAD1Q9UHV2 236 aa19.02■□□□□ 0.64
SPG11-215ENST00000559193 PCDHB6Q9Y5E3 794 aa19.02■□□□□ 0.64
SPG11-215ENST00000559193 BCORQ6W2J9 1755 aa19.02■□□□□ 0.64
SPG11-215ENST00000559193 POLR2DO15514 142 aaKnown RBP19.02■□□□□ 0.64
SPG11-215ENST00000559193 IL6STP40189 918 aaPredicted RBP19.02■□□□□ 0.64
SPG11-215ENST00000559193 TBX2Q13207 712 aaPredicted RBP19.02■□□□□ 0.64
SPG11-215ENST00000559193 CCDC82Q8N4S0 544 aa19.02■□□□□ 0.64
SPG11-215ENST00000559193 CRACR2BQ8N4Y2 399 aaPredicted RBP19.02■□□□□ 0.64
SPG11-215ENST00000559193 SEC31BQ9NQW1 1179 aa19.02■□□□□ 0.64
SPG11-215ENST00000559193 HOOK1Q9UJC3 728 aaKnown RBP19.02■□□□□ 0.64
SPG11-215ENST00000559193 DEXIO95424 95 aa19.01■□□□□ 0.63
SPG11-215ENST00000559193 SARSP49591 514 aaKnown RBP19.01■□□□□ 0.63
SPG11-215ENST00000559193 ZNF827Q17R98 1081 aa19.01■□□□□ 0.63
SPG11-215ENST00000559193 FCHSD1Q86WN1 690 aa19.01■□□□□ 0.63
SPG11-215ENST00000559193 GRAMD1CQ8IYS0 662 aa19.01■□□□□ 0.63
SPG11-215ENST00000559193 ZNF18P17022 549 aa19.01■□□□□ 0.63
SPG11-215ENST00000559193 GNAT2P19087 354 aa19.01■□□□□ 0.63
SPG11-215ENST00000559193 MORC3Q14149 939 aa19.01■□□□□ 0.63
SPG11-215ENST00000559193 SART3Q15020 963 aaKnown RBP19.01■□□□□ 0.63
SPG11-215ENST00000559193 SUSD4Q5VX71 490 aa19.01■□□□□ 0.63
SPG11-215ENST00000559193 OXER1Q8TDS5 423 aa19.01■□□□□ 0.63
SPG11-215ENST00000559193 NACAP1Q9BZK3 213 aa19.01■□□□□ 0.63
SPG11-215ENST00000559193 KIF20AO95235 890 aa19■□□□□ 0.63
SPG11-215ENST00000559193 BCAMP50895 628 aa19■□□□□ 0.63
SPG11-215ENST00000559193 AK7Q96M32 723 aa19■□□□□ 0.63
SPG11-215ENST00000559193 BTG4Q9NY30 223 aa19■□□□□ 0.63
SPG11-215ENST00000559193 NFE2L3Q9Y4A8 694 aa19■□□□□ 0.63
SPG11-215ENST00000559193 ARHGAP6O43182 974 aa19■□□□□ 0.63
SPG11-215ENST00000559193 TRMT44Q8IYL2 757 aaKnown RBP19■□□□□ 0.63
SPG11-215ENST00000559193 ZNF654Q8IZM8 581 aa19■□□□□ 0.63
SPG11-215ENST00000559193 ZNF579Q8NAF0 562 aaKnown RBP19■□□□□ 0.63
SPG11-215ENST00000559193 MIGA1Q8NAN2 632 aa19■□□□□ 0.63
SPG11-215ENST00000559193 MPHOSPH8Q99549 860 aa19■□□□□ 0.63
SPG11-215ENST00000559193 PLCH1Q4KWH8 1693 aa19■□□□□ 0.63
SPG11-215ENST00000559193 VWA3AA6NCI4 1184 aa18.99■□□□□ 0.63
SPG11-215ENST00000559193 ACTN4O43707 911 aaKnown RBP18.99■□□□□ 0.63
SPG11-215ENST00000559193 MLKLQ8NB16 471 aa18.99■□□□□ 0.63
SPG11-215ENST00000559193 SMARCE1Q969G3 411 aa18.99■□□□□ 0.63
SPG11-215ENST00000559193 MED15Q96RN5 788 aa18.99■□□□□ 0.63
SPG11-215ENST00000559193 SRPRBQ9Y5M8 271 aaKnown RBP18.99■□□□□ 0.63
SPG11-215ENST00000559193 ERICH2A1L162 156 aa18.99■□□□□ 0.63
SPG11-215ENST00000559193 FANCBQ8NB91 859 aa18.99■□□□□ 0.63
SPG11-215ENST00000559193 ENOX1Q8TC92 643 aaKnown RBP18.99■□□□□ 0.63
SPG11-215ENST00000559193 SHISA4Q96DD7 197 aa18.99■□□□□ 0.63
SPG11-215ENST00000559193 MTA3Q9BTC8 594 aa18.99■□□□□ 0.63
SPG11-215ENST00000559193 PPP2R2CQ9Y2T4 447 aa18.99■□□□□ 0.63
SPG11-215ENST00000559193 RCAN1P53805 252 aa18.98■□□□□ 0.63
SPG11-215ENST00000559193 USP49Q70CQ1 688 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms