RNA–Protein interactions for RNA: ENST00000559151.1

CASC4-208, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 883 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-208ENST00000559151 ARHGEF15O94989 841 aa16.52■□□□□ 0.24
CASC4-208ENST00000559151 PGRP06401 933 aa16.52■□□□□ 0.24
CASC4-208ENST00000559151 OVOS1Q6IE37 1185 aa16.52■□□□□ 0.24
CASC4-208ENST00000559151 KIAA1211Q6ZU35 1233 aa16.52■□□□□ 0.24
CASC4-208ENST00000559151 SNTG2Q9NY99 539 aa16.52■□□□□ 0.24
CASC4-208ENST00000559151 TBX22Q9Y458 520 aa16.52■□□□□ 0.24
CASC4-208ENST00000559151 SYNGAP1Q96PV0 1343 aa16.51■□□□□ 0.23
CASC4-208ENST00000559151 CCDC85CA6NKD9 419 aa16.51■□□□□ 0.23
CASC4-208ENST00000559151 CASP7P55210 303 aa16.51■□□□□ 0.23
CASC4-208ENST00000559151 ERVK-24P63145 666 aa16.51■□□□□ 0.23
CASC4-208ENST00000559151 RASA3Q14644 834 aa16.51■□□□□ 0.23
CASC4-208ENST00000559151 LCE2AQ5TA79 106 aaPredicted RBP16.51■□□□□ 0.23
CASC4-208ENST00000559151 LARP1BQ659C4 914 aaKnown RBP16.51■□□□□ 0.23
CASC4-208ENST00000559151 PICK1Q9NRD5 415 aa16.51■□□□□ 0.23
CASC4-208ENST00000559151 GMIPQ9P107 970 aa16.51■□□□□ 0.23
CASC4-208ENST00000559151 MLECQ14165 292 aa16.5■□□□□ 0.23
CASC4-208ENST00000559151 DDR2Q16832 855 aa16.5■□□□□ 0.23
CASC4-208ENST00000559151 TREML4Q6UXN2 200 aa16.5■□□□□ 0.23
CASC4-208ENST00000559151 JAZF1Q86VZ6 243 aa16.5■□□□□ 0.23
CASC4-208ENST00000559151 DEPDC7Q96QD5 511 aa16.5■□□□□ 0.23
CASC4-208ENST00000559151 TM9SF2Q99805 663 aa16.5■□□□□ 0.23
CASC4-208ENST00000559151 WNT10AQ9GZT5 417 aa16.5■□□□□ 0.23
CASC4-208ENST00000559151 CRIM1Q9NZV1 1036 aa16.5■□□□□ 0.23
CASC4-208ENST00000559151 KLHL3Q9UH77 587 aa16.5■□□□□ 0.23
CASC4-208ENST00000559151 SLC22A31A6NKX4 558 aa16.49■□□□□ 0.23
CASC4-208ENST00000559151 ETF1P62495 437 aaKnown RBP16.49■□□□□ 0.23
CASC4-208ENST00000559151 TMEM201Q5SNT2 666 aa16.49■□□□□ 0.23
CASC4-208ENST00000559151 C19orf47Q8N9M1 422 aaKnown RBP16.49■□□□□ 0.23
CASC4-208ENST00000559151 AP4E1Q9UPM8 1137 aa16.49■□□□□ 0.23
CASC4-208ENST00000559151 A0A1W2PQH9 124 aa16.48■□□□□ 0.23
CASC4-208ENST00000559151 MEGF11A6BM72 1044 aa16.48■□□□□ 0.23
CASC4-208ENST00000559151 FAM221BA6H8Z2 402 aa16.48■□□□□ 0.23
CASC4-208ENST00000559151 GNB5O14775 395 aa16.48■□□□□ 0.23
CASC4-208ENST00000559151 GUCY2CP25092 1073 aa16.48■□□□□ 0.23
CASC4-208ENST00000559151 ZBTB37Q5TC79 503 aa16.48■□□□□ 0.23
CASC4-208ENST00000559151 TTC6Q86TZ1 520 aa16.48■□□□□ 0.23
CASC4-208ENST00000559151 MICAL1Q8TDZ2 1067 aa16.48■□□□□ 0.23
CASC4-208ENST00000559151 ATG4CQ96DT6 458 aa16.48■□□□□ 0.23
CASC4-208ENST00000559151 ADAM30Q9UKF2 790 aa16.48■□□□□ 0.23
CASC4-208ENST00000559151 TRIM28Q13263 835 aaKnown RBP16.47■□□□□ 0.23
CASC4-208ENST00000559151 NUTM2GQ5VZR2 741 aa16.47■□□□□ 0.23
CASC4-208ENST00000559151 ZSCAN1Q8NBB4 408 aa16.47■□□□□ 0.23
CASC4-208ENST00000559151 ACSF2Q96CM8 615 aaPredicted RBP16.47■□□□□ 0.23
CASC4-208ENST00000559151 FANCD2OSQ96PS1 177 aa16.47■□□□□ 0.23
CASC4-208ENST00000559151 RNF208Q9H0X6 261 aa16.47■□□□□ 0.23
CASC4-208ENST00000559151 MSRB2Q9Y3D2 182 aa16.47■□□□□ 0.23
CASC4-208ENST00000559151 ADH5P11766 374 aa16.46■□□□□ 0.23
CASC4-208ENST00000559151 DISC1Q9NRI5 854 aa16.46■□□□□ 0.23
CASC4-208ENST00000559151 MAPK8IP1Q9UQF2 711 aa16.46■□□□□ 0.23
CASC4-208ENST00000559151 SPDYE3A6NKU9 549 aa16.45■□□□□ 0.22
CASC4-208ENST00000559151 NME1P15531 152 aaKnown RBP16.45■□□□□ 0.22
CASC4-208ENST00000559151 NTF4P34130 210 aa16.45■□□□□ 0.22
CASC4-208ENST00000559151 FXNQ16595 210 aa16.45■□□□□ 0.22
CASC4-208ENST00000559151 NLRC3Q7RTR2 1065 aa16.45■□□□□ 0.22
CASC4-208ENST00000559151 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.45■□□□□ 0.22
CASC4-208ENST00000559151 NLGN1Q8N2Q7 840 aa16.45■□□□□ 0.22
CASC4-208ENST00000559151 CYP4F12Q9HCS2 524 aa16.45■□□□□ 0.22
CASC4-208ENST00000559151 MKL2Q9ULH7 1088 aa16.45■□□□□ 0.22
CASC4-208ENST00000559151 CHURC1-FNTBB4DL54 471 aa16.44■□□□□ 0.22
CASC4-208ENST00000559151 FANCGO15287 622 aa16.44■□□□□ 0.22
CASC4-208ENST00000559151 ACRP10323 421 aa16.44■□□□□ 0.22
CASC4-208ENST00000559151 ARSHQ5FYA8 562 aa16.44■□□□□ 0.22
CASC4-208ENST00000559151 SDE2Q6IQ49 451 aa16.44■□□□□ 0.22
CASC4-208ENST00000559151 IGF2-ASQ6U949 168 aa16.44■□□□□ 0.22
CASC4-208ENST00000559151 TAB3Q8N5C8 712 aaPredicted RBP16.44■□□□□ 0.22
CASC4-208ENST00000559151 MRPL18Q9H0U6 180 aaKnown RBP16.44■□□□□ 0.22
CASC4-208ENST00000559151 TJP2Q9UDY2 1190 aa16.44■□□□□ 0.22
CASC4-208ENST00000559151 B2RBV5 119 aa16.43■□□□□ 0.22
CASC4-208ENST00000559151 ELNP15502 786 aa16.43■□□□□ 0.22
CASC4-208ENST00000559151 ZYXQ15942 572 aaKnown RBP16.43■□□□□ 0.22
CASC4-208ENST00000559151 SMG8Q8ND04 991 aaKnown RBP16.43■□□□□ 0.22
CASC4-208ENST00000559151 CNNM2Q9H8M5 875 aa16.43■□□□□ 0.22
CASC4-208ENST00000559151 SUGCTQ9HAC7 445 aa16.43■□□□□ 0.22
CASC4-208ENST00000559151 MRPL42Q9Y6G3 142 aaKnown RBP16.43■□□□□ 0.22
CASC4-208ENST00000559151 UPK3BL1B0FP48 263 aa16.42■□□□□ 0.22
CASC4-208ENST00000559151 UPK3BL2E5RIL1 263 aa16.42■□□□□ 0.22
CASC4-208ENST00000559151 DRD2P14416 443 aa16.42■□□□□ 0.22
CASC4-208ENST00000559151 CANXP27824 592 aaKnown RBP16.42■□□□□ 0.22
CASC4-208ENST00000559151 CDCP2Q5VXM1 449 aa16.42■□□□□ 0.22
CASC4-208ENST00000559151 AGGF1Q8N302 714 aaeCLIP16.42■□□□□ 0.22
CASC4-208ENST00000559151 RNF214Q8ND24 703 aa16.42■□□□□ 0.22
CASC4-208ENST00000559151 CCDC113Q9H0I3 377 aa16.42■□□□□ 0.22
CASC4-208ENST00000559151 ATXN3LQ9H3M9 355 aa16.42■□□□□ 0.22
CASC4-208ENST00000559151 FBRSQ9HAH7 460 aa16.42■□□□□ 0.22
CASC4-208ENST00000559151 FAM86C2PA6NEL3 165 aa16.41■□□□□ 0.22
CASC4-208ENST00000559151 NEFMP07197 916 aa16.41■□□□□ 0.22
CASC4-208ENST00000559151 SOX4Q06945 474 aaPredicted RBP16.41■□□□□ 0.22
CASC4-208ENST00000559151 TTLL4Q14679 1199 aa16.41■□□□□ 0.22
CASC4-208ENST00000559151 LRP10Q7Z4F1 713 aa16.41■□□□□ 0.22
CASC4-208ENST00000559151 FAM13CQ8NE31 585 aa16.41■□□□□ 0.22
CASC4-208ENST00000559151 GJB6O95452 261 aa16.4■□□□□ 0.22
CASC4-208ENST00000559151 SHISA2Q6UWI4 295 aa16.4■□□□□ 0.22
CASC4-208ENST00000559151 UNC5AQ6ZN44 842 aa16.4■□□□□ 0.22
CASC4-208ENST00000559151 SLC9A7Q96T83 725 aa16.4■□□□□ 0.22
CASC4-208ENST00000559151 PIK3R2O00459 728 aa16.39■□□□□ 0.21
CASC4-208ENST00000559151 TNFRSF10CO14798 259 aa16.39■□□□□ 0.21
CASC4-208ENST00000559151 HCLS1P14317 486 aaPredicted RBP16.39■□□□□ 0.21
CASC4-208ENST00000559151 C6orf15Q6UXA7 325 aaPredicted RBP16.39■□□□□ 0.21
CASC4-208ENST00000559151 DYMQ7RTS9 669 aa16.39■□□□□ 0.21
CASC4-208ENST00000559151 UBE3DQ7Z6J8 389 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms