RNA–Protein interactions for RNA: ENST00000559145.1

RORA-209, Transcript of RAR related orphan receptor A, humanhuman

TSL 4

Gene RORA, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RORA-209ENST00000559145 NEDD4P46934 1319 aa12.15□□□□□ -0.46
RORA-209ENST00000559145 DDTLA6NHG4 134 aaPredicted RBP12.15□□□□□ -0.46
RORA-209ENST00000559145 SMIM22K7EJ46 135 aa12.15□□□□□ -0.46
RORA-209ENST00000559145 HMGB1P09429 215 aaKnown RBP12.15□□□□□ -0.46
RORA-209ENST00000559145 PCP11498 1178 aaKnown RBP12.15□□□□□ -0.46
RORA-209ENST00000559145 HIRAP54198 1017 aaPredicted RBP12.15□□□□□ -0.46
RORA-209ENST00000559145 EVX2Q03828 476 aa12.15□□□□□ -0.46
RORA-209ENST00000559145 TSGA10IPQ3SY00 556 aa12.15□□□□□ -0.46
RORA-209ENST00000559145 PNMA8AQ86V59 439 aaPredicted RBP12.15□□□□□ -0.46
RORA-209ENST00000559145 STAG1Q8WVM7 1258 aa12.15□□□□□ -0.46
RORA-209ENST00000559145 DYNLL2Q96FJ2 89 aa12.15□□□□□ -0.46
RORA-209ENST00000559145 KIF2CQ99661 725 aa12.15□□□□□ -0.46
RORA-209ENST00000559145 TM6SF1Q9BZW5 370 aa12.15□□□□□ -0.46
RORA-209ENST00000559145 TMEM39BQ9GZU3 492 aa12.15□□□□□ -0.46
RORA-209ENST00000559145 PI4KBQ9UBF8 816 aa12.15□□□□□ -0.46
RORA-209ENST00000559145 SCAF8Q9UPN6 1271 aaKnown RBP12.15□□□□□ -0.46
RORA-209ENST00000559145 CLEC11AQ9Y240 323 aa12.15□□□□□ -0.46
RORA-209ENST00000559145 ATRNL1Q5VV63 1379 aa12.15□□□□□ -0.46
RORA-209ENST00000559145 ROBO3Q96MS0 1386 aa12.15□□□□□ -0.46
RORA-209ENST00000559145 PITPNM2Q9BZ72 1349 aa12.14□□□□□ -0.47
RORA-209ENST00000559145 SCN4AP35499 1836 aa12.14□□□□□ -0.47
RORA-209ENST00000559145 MYH1P12882 1939 aa12.14□□□□□ -0.47
RORA-209ENST00000559145 B4E1Z4 1266 aa12.14□□□□□ -0.47
RORA-209ENST00000559145 ST18O60284 1047 aa12.14□□□□□ -0.47
RORA-209ENST00000559145 RANBP6O60518 1105 aaKnown RBP12.14□□□□□ -0.47
RORA-209ENST00000559145 PRDM1O75626 825 aa12.14□□□□□ -0.47
RORA-209ENST00000559145 VEGFAP15692 232 aaPredicted RBP12.14□□□□□ -0.47
RORA-209ENST00000559145 NEK4P51957 841 aa12.14□□□□□ -0.47
RORA-209ENST00000559145 FGD1P98174 961 aa12.14□□□□□ -0.47
RORA-209ENST00000559145 SH3BP5LQ7L8J4 393 aa12.14□□□□□ -0.47
RORA-209ENST00000559145 SULF1Q8IWU6 871 aa12.14□□□□□ -0.47
RORA-209ENST00000559145 SLC44A5Q8NCS7 719 aa12.14□□□□□ -0.47
RORA-209ENST00000559145 ESR2Q92731 530 aa12.14□□□□□ -0.47
RORA-209ENST00000559145 DEFB129Q9H1M3 183 aa12.14□□□□□ -0.47
RORA-209ENST00000559145 EHD4Q9H223 541 aa12.14□□□□□ -0.47
RORA-209ENST00000559145 RRAGCQ9HB90 399 aa12.14□□□□□ -0.47
RORA-209ENST00000559145 INCENPQ9NQS7 918 aa12.14□□□□□ -0.47
RORA-209ENST00000559145 SWAP70Q9UH65 585 aa12.14□□□□□ -0.47
RORA-209ENST00000559145 SERPINB13Q9UIV8 391 aa12.14□□□□□ -0.47
RORA-209ENST00000559145 RBM19Q9Y4C8 960 aaKnown RBP12.14□□□□□ -0.47
RORA-209ENST00000559145 CPA1P15085 419 aa12.13□□□□□ -0.47
RORA-209ENST00000559145 RPS6KB1P23443 525 aa12.13□□□□□ -0.47
RORA-209ENST00000559145 MCM5P33992 734 aa12.13□□□□□ -0.47
RORA-209ENST00000559145 CDK8P49336 464 aa12.13□□□□□ -0.47
RORA-209ENST00000559145 C16orf86Q6ZW13 317 aa12.13□□□□□ -0.47
RORA-209ENST00000559145 RUFY3Q7L099 469 aa12.13□□□□□ -0.47
RORA-209ENST00000559145 FOXP4Q8IVH2 680 aaPredicted RBP12.13□□□□□ -0.47
RORA-209ENST00000559145 ZNF444Q8N0Y2 327 aaPredicted RBP12.13□□□□□ -0.47
RORA-209ENST00000559145 IL17RAQ96F46 866 aa12.13□□□□□ -0.47
RORA-209ENST00000559145 ZSWIM6Q9HCJ5 1215 aa12.13□□□□□ -0.47
RORA-209ENST00000559145 PDRG1Q9NUG6 133 aa12.13□□□□□ -0.47
RORA-209ENST00000559145 PPP2R3BQ9Y5P8 575 aa12.13□□□□□ -0.47
RORA-209ENST00000559145 TSPY2A6NKD2 308 aa12.12□□□□□ -0.47
RORA-209ENST00000559145 FAM196BA6NMK8 535 aa12.12□□□□□ -0.47
RORA-209ENST00000559145 POTECB2RU33 542 aa12.12□□□□□ -0.47
RORA-209ENST00000559145 PRC1O43663 620 aa12.12□□□□□ -0.47
RORA-209ENST00000559145 ORC4O43929 436 aa12.12□□□□□ -0.47
RORA-209ENST00000559145 KDM4AO75164 1064 aa12.12□□□□□ -0.47
RORA-209ENST00000559145 DHX32Q7L7V1 743 aaKnown RBP12.12□□□□□ -0.47
RORA-209ENST00000559145 CHST3Q7LGC8 479 aa12.12□□□□□ -0.47
RORA-209ENST00000559145 KRT26Q7Z3Y9 468 aa12.12□□□□□ -0.47
RORA-209ENST00000559145 MB21D2Q8IYB1 491 aaPredicted RBP12.12□□□□□ -0.47
RORA-209ENST00000559145 ZC3H15Q8WU90 426 aaKnown RBP12.12□□□□□ -0.47
RORA-209ENST00000559145 HOOK2Q96ED9 719 aa12.12□□□□□ -0.47
RORA-209ENST00000559145 UBAC1Q9BSL1 405 aa12.12□□□□□ -0.47
RORA-209ENST00000559145 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.12□□□□□ -0.47
RORA-209ENST00000559145 HERC5Q9UII4 1024 aaKnown RBP12.12□□□□□ -0.47
RORA-209ENST00000559145 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.12□□□□□ -0.47
RORA-209ENST00000559145 ERICH2A1L162 156 aa12.11□□□□□ -0.47
RORA-209ENST00000559145 ADM5C9JUS6 153 aa12.11□□□□□ -0.47
RORA-209ENST00000559145 MPHOSPH10O00566 681 aaKnown RBP12.11□□□□□ -0.47
RORA-209ENST00000559145 TSPY3P0CV98 308 aa12.11□□□□□ -0.47
RORA-209ENST00000559145 TSPY8P0CW00 308 aa12.11□□□□□ -0.47
RORA-209ENST00000559145 GABPAQ06546 454 aa12.11□□□□□ -0.47
RORA-209ENST00000559145 SART3Q15020 963 aaKnown RBP12.11□□□□□ -0.47
RORA-209ENST00000559145 FAM47AQ5JRC9 791 aa12.11□□□□□ -0.47
RORA-209ENST00000559145 NOL8Q76FK4 1167 aaKnown RBP12.11□□□□□ -0.47
RORA-209ENST00000559145 IQCA1Q86XH1 822 aa12.11□□□□□ -0.47
RORA-209ENST00000559145 CDAN1Q8IWY9 1227 aa12.11□□□□□ -0.47
RORA-209ENST00000559145 TCEANC2Q96MN5 208 aa12.11□□□□□ -0.47
RORA-209ENST00000559145 NMRK2Q9NPI5 230 aa12.11□□□□□ -0.47
RORA-209ENST00000559145 TAOK2Q9UL54 1235 aa12.11□□□□□ -0.47
RORA-209ENST00000559145 TACC3Q9Y6A5 838 aa12.11□□□□□ -0.47
RORA-209ENST00000559145 FGRP09769 529 aa12.1□□□□□ -0.47
RORA-209ENST00000559145 RASA1P20936 1047 aa12.1□□□□□ -0.47
RORA-209ENST00000559145 NT5C2P49902 561 aa12.1□□□□□ -0.47
RORA-209ENST00000559145 TFAP4Q01664 338 aa12.1□□□□□ -0.47
RORA-209ENST00000559145 SUPT20HL1Q3ZLR7 823 aa12.1□□□□□ -0.47
RORA-209ENST00000559145 NBPF12Q5TAG4 269 aaPredicted RBP12.1□□□□□ -0.47
RORA-209ENST00000559145 PRAMEF18Q5VWM3 479 aa12.1□□□□□ -0.47
RORA-209ENST00000559145 DCAF15Q66K64 600 aa12.1□□□□□ -0.47
RORA-209ENST00000559145 Q6ZUG5 572 aa12.1□□□□□ -0.47
RORA-209ENST00000559145 CYB5R4Q7L1T6 521 aa12.1□□□□□ -0.47
RORA-209ENST00000559145 MIGA2Q7L4E1 593 aa12.1□□□□□ -0.47
RORA-209ENST00000559145 USP48Q86UV5 1035 aa12.1□□□□□ -0.47
RORA-209ENST00000559145 HSCBQ8IWL3 235 aa12.1□□□□□ -0.47
RORA-209ENST00000559145 IL27Q8NEV9 243 aa12.1□□□□□ -0.47
RORA-209ENST00000559145 TEPSINQ96N21 525 aa12.1□□□□□ -0.47
RORA-209ENST00000559145 ZKSCAN3Q9BRR0 538 aa12.1□□□□□ -0.47
RORA-209ENST00000559145 LRRC2Q9BYS8 371 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms