RNA–Protein interactions for RNA: ENST00000558890.5

LRRC28-211, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 978 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-211ENST00000558890 TNFAIP1Q13829 316 aa9.08□□□□□ -0.96
LRRC28-211ENST00000558890 KLHL40Q2TBA0 621 aa9.08□□□□□ -0.96
LRRC28-211ENST00000558890 CWC27Q6UX04 472 aaKnown RBP9.08□□□□□ -0.96
LRRC28-211ENST00000558890 MOB2Q70IA6 237 aa9.08□□□□□ -0.96
LRRC28-211ENST00000558890 FAM83AQ86UY5 434 aa9.08□□□□□ -0.96
LRRC28-211ENST00000558890 APOBEC3FQ8IUX4 373 aaKnown RBP9.08□□□□□ -0.96
LRRC28-211ENST00000558890 MAGEB6Q8N7X4 407 aa9.08□□□□□ -0.96
LRRC28-211ENST00000558890 JMYQ8N9B5 988 aa9.08□□□□□ -0.96
LRRC28-211ENST00000558890 HHIPL1Q96JK4 782 aa9.08□□□□□ -0.96
LRRC28-211ENST00000558890 DSCC1Q9BVC3 393 aa9.08□□□□□ -0.96
LRRC28-211ENST00000558890 TMEM39BQ9GZU3 492 aa9.08□□□□□ -0.96
LRRC28-211ENST00000558890 LSG1Q9H089 658 aaKnown RBP9.08□□□□□ -0.96
LRRC28-211ENST00000558890 ATP8A2Q9NTI2 1148 aa9.08□□□□□ -0.96
LRRC28-211ENST00000558890 DDX49Q9Y6V7 483 aaKnown RBP9.08□□□□□ -0.96
LRRC28-211ENST00000558890 ATRNL1Q5VV63 1379 aa9.08□□□□□ -0.96
LRRC28-211ENST00000558890 CCDC171Q6TFL3 1326 aa9.07□□□□□ -0.96
LRRC28-211ENST00000558890 MAGEB6P1A0A0J9YX57 407 aa9.07□□□□□ -0.96
LRRC28-211ENST00000558890 FAM155AB1AL88 458 aaPredicted RBP9.07□□□□□ -0.96
LRRC28-211ENST00000558890 TCP10L2B9ZVM9 353 aa9.07□□□□□ -0.96
LRRC28-211ENST00000558890 ENTPD3O75355 529 aa9.07□□□□□ -0.96
LRRC28-211ENST00000558890 PCP11498 1178 aaKnown RBP9.07□□□□□ -0.96
LRRC28-211ENST00000558890 ZKSCAN1P17029 563 aaPredicted RBP9.07□□□□□ -0.96
LRRC28-211ENST00000558890 CYP7A1P22680 504 aa9.07□□□□□ -0.96
LRRC28-211ENST00000558890 BTDP43251 543 aa9.07□□□□□ -0.96
LRRC28-211ENST00000558890 VEGFBP49765 207 aa9.07□□□□□ -0.96
LRRC28-211ENST00000558890 ALX1Q15699 326 aa9.07□□□□□ -0.96
LRRC28-211ENST00000558890 SLFNL1Q499Z3 407 aa9.07□□□□□ -0.96
LRRC28-211ENST00000558890 MCTP1Q6DN14 999 aa9.07□□□□□ -0.96
LRRC28-211ENST00000558890 NOL8Q76FK4 1167 aaKnown RBP9.07□□□□□ -0.96
LRRC28-211ENST00000558890 FAM151AQ8WW52 585 aa9.07□□□□□ -0.96
LRRC28-211ENST00000558890 AIDAQ96BJ3 306 aa9.07□□□□□ -0.96
LRRC28-211ENST00000558890 KLRG1Q96E93 195 aa9.07□□□□□ -0.96
LRRC28-211ENST00000558890 CRNKL1Q9BZJ0 848 aaKnown RBP9.07□□□□□ -0.96
LRRC28-211ENST00000558890 GBA2Q9HCG7 927 aaPredicted RBP9.07□□□□□ -0.96
LRRC28-211ENST00000558890 USP40Q9NVE5 1235 aa9.07□□□□□ -0.96
LRRC28-211ENST00000558890 MKRN1Q9UHC7 482 aaKnown RBP9.07□□□□□ -0.96
LRRC28-211ENST00000558890 FZD1Q9UP38 647 aa9.07□□□□□ -0.96
LRRC28-211ENST00000558890 SNX14Q9Y5W7 946 aa9.07□□□□□ -0.96
LRRC28-211ENST00000558890 MYH1P12882 1939 aa9.07□□□□□ -0.96
LRRC28-211ENST00000558890 TRPM7Q96QT4 1865 aa9.06□□□□□ -0.96
LRRC28-211ENST00000558890 GPAA1O43292 621 aa9.06□□□□□ -0.96
LRRC28-211ENST00000558890 FKBP1BP68106 108 aa9.06□□□□□ -0.96
LRRC28-211ENST00000558890 NMIQ13287 307 aaPredicted RBP9.06□□□□□ -0.96
LRRC28-211ENST00000558890 DEFB115Q30KQ5 88 aa9.06□□□□□ -0.96
LRRC28-211ENST00000558890 RNF20Q5VTR2 975 aa9.06□□□□□ -0.96
LRRC28-211ENST00000558890 OSBP2Q969R2 916 aa9.06□□□□□ -0.96
LRRC28-211ENST00000558890 STRBPQ96SI9 672 aaKnown RBP9.06□□□□□ -0.96
LRRC28-211ENST00000558890 ZIC5Q96T25 663 aa9.06□□□□□ -0.96
LRRC28-211ENST00000558890 UPF3BQ9BZI7 483 aaKnown RBP9.06□□□□□ -0.96
LRRC28-211ENST00000558890 NACAP1Q9BZK3 213 aa9.06□□□□□ -0.96
LRRC28-211ENST00000558890 DHX36Q9H2U1 1008 aaKnown RBP9.06□□□□□ -0.96
LRRC28-211ENST00000558890 GRPEL1Q9HAV7 217 aa9.06□□□□□ -0.96
LRRC28-211ENST00000558890 TMOD2Q9NZR1 351 aa9.06□□□□□ -0.96
LRRC28-211ENST00000558890 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.06□□□□□ -0.96
LRRC28-211ENST00000558890 ROBO3Q96MS0 1386 aa9.06□□□□□ -0.96
LRRC28-211ENST00000558890 WDR33Q9C0J8 1336 aaKnown RBP9.05□□□□□ -0.96
LRRC28-211ENST00000558890 A0A0D9SFI3 127 aa9.05□□□□□ -0.96
LRRC28-211ENST00000558890 DDTLA6NHG4 134 aaPredicted RBP9.05□□□□□ -0.96
LRRC28-211ENST00000558890 UBE2Q2LH0YL09 131 aa9.05□□□□□ -0.96
LRRC28-211ENST00000558890 MBD3O95983 291 aa9.05□□□□□ -0.96
LRRC28-211ENST00000558890 SLURP2P0DP57 97 aa9.05□□□□□ -0.96
LRRC28-211ENST00000558890 TNNI2P48788 182 aa9.05□□□□□ -0.96
LRRC28-211ENST00000558890 DYNLL1P63167 89 aaKnown RBP9.05□□□□□ -0.96
LRRC28-211ENST00000558890 SBK1Q52WX2 424 aa9.05□□□□□ -0.96
LRRC28-211ENST00000558890 METTL16Q86W50 562 aaKnown RBP9.05□□□□□ -0.96
LRRC28-211ENST00000558890 SH3RF3Q8TEJ3 882 aaPredicted RBP9.05□□□□□ -0.96
LRRC28-211ENST00000558890 HOOK2Q96ED9 719 aa9.05□□□□□ -0.96
LRRC28-211ENST00000558890 ZSCAN31Q96LW9 406 aaPredicted RBP9.05□□□□□ -0.96
LRRC28-211ENST00000558890 TM6SF1Q9BZW5 370 aa9.05□□□□□ -0.96
LRRC28-211ENST00000558890 PUS7LQ9H0K6 701 aaKnown RBP9.05□□□□□ -0.96
LRRC28-211ENST00000558890 IL25Q9H293 177 aa9.05□□□□□ -0.96
LRRC28-211ENST00000558890 VEZTQ9HBM0 779 aa9.05□□□□□ -0.96
LRRC28-211ENST00000558890 ARPP21Q9UBL0 812 aaPredicted RBP9.05□□□□□ -0.96
LRRC28-211ENST00000558890 CTNNA3Q9UI47 895 aa9.05□□□□□ -0.96
LRRC28-211ENST00000558890 ZNF112Q9UJU3 913 aa9.05□□□□□ -0.96
LRRC28-211ENST00000558890 LIMCH1Q9UPQ0 1083 aa9.05□□□□□ -0.96
LRRC28-211ENST00000558890 UNCXA6NJT0 531 aa9.04□□□□□ -0.96
LRRC28-211ENST00000558890 PHF20L1A8MW92 1017 aa9.04□□□□□ -0.96
LRRC28-211ENST00000558890 PATL2C9JE40 543 aaKnown RBP9.04□□□□□ -0.96
LRRC28-211ENST00000558890 MBD4O95243 580 aa9.04□□□□□ -0.96
LRRC28-211ENST00000558890 BRD1O95696 1058 aa9.04□□□□□ -0.96
LRRC28-211ENST00000558890 NCLP19338 710 aaKnown RBP9.04□□□□□ -0.96
LRRC28-211ENST00000558890 PSMA5P28066 241 aa9.04□□□□□ -0.96
LRRC28-211ENST00000558890 HUNKP57058 714 aa9.04□□□□□ -0.96
LRRC28-211ENST00000558890 SUPT20HL1Q3ZLR7 823 aa9.04□□□□□ -0.96
LRRC28-211ENST00000558890 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.04□□□□□ -0.96
LRRC28-211ENST00000558890 AMOTL1Q8IY63 956 aa9.04□□□□□ -0.96
LRRC28-211ENST00000558890 C2orf69Q8N8R5 385 aa9.04□□□□□ -0.96
LRRC28-211ENST00000558890 ANP32BQ92688 251 aaKnown RBP9.04□□□□□ -0.96
LRRC28-211ENST00000558890 MAP4K1Q92918 833 aa9.04□□□□□ -0.96
LRRC28-211ENST00000558890 FAM227BQ96M60 508 aa9.04□□□□□ -0.96
LRRC28-211ENST00000558890 JAKMIP1Q96N16 626 aaKnown RBP9.04□□□□□ -0.96
LRRC28-211ENST00000558890 EHD4Q9H223 541 aa9.04□□□□□ -0.96
LRRC28-211ENST00000558890 ZNF408Q9H9D4 720 aa9.04□□□□□ -0.96
LRRC28-211ENST00000558890 SH2B1Q9NRF2 756 aaPredicted RBP9.04□□□□□ -0.96
LRRC28-211ENST00000558890 PDRG1Q9NUG6 133 aa9.04□□□□□ -0.96
LRRC28-211ENST00000558890 ANAPC4Q9UJX5 808 aa9.04□□□□□ -0.96
LRRC28-211ENST00000558890 MYH8P13535 1937 aa9.03□□□□□ -0.96
LRRC28-211ENST00000558890 BAZ2AQ9UIF9 1905 aaKnown RBP9.03□□□□□ -0.96
LRRC28-211ENST00000558890 SIPA1L1O43166 1804 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms