RNA–Protein interactions for RNA: ENST00000558745.5

TSPAN3-205, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-205ENST00000558745 PLEKHM2Q8IWE5 1019 aa16.7■□□□□ 0.26
TSPAN3-205ENST00000558745 RNF113AO15541 343 aaKnown RBP16.7■□□□□ 0.26
TSPAN3-205ENST00000558745 PDE4AP27815 886 aa16.7■□□□□ 0.26
TSPAN3-205ENST00000558745 TM4SF4P48230 202 aa16.7■□□□□ 0.26
TSPAN3-205ENST00000558745 OSBP2Q969R2 916 aa16.7■□□□□ 0.26
TSPAN3-205ENST00000558745 SEC62Q99442 399 aaKnown RBP16.7■□□□□ 0.26
TSPAN3-205ENST00000558745 PI4KBQ9UBF8 816 aa16.7■□□□□ 0.26
TSPAN3-205ENST00000558745 SPDYE5A6NIY4 337 aa16.69■□□□□ 0.26
TSPAN3-205ENST00000558745 SMIM22K7EJ46 135 aa16.69■□□□□ 0.26
TSPAN3-205ENST00000558745 IRF6O14896 467 aa16.69■□□□□ 0.26
TSPAN3-205ENST00000558745 TBC1D12O60347 775 aa16.69■□□□□ 0.26
TSPAN3-205ENST00000558745 ZBTB48P10074 688 aaPredicted RBP16.69■□□□□ 0.26
TSPAN3-205ENST00000558745 CYP2D6P10635 497 aa16.69■□□□□ 0.26
TSPAN3-205ENST00000558745 PLCD1P51178 756 aa16.69■□□□□ 0.26
TSPAN3-205ENST00000558745 JAG1P78504 1218 aa16.69■□□□□ 0.26
TSPAN3-205ENST00000558745 SHROOM1Q2M3G4 852 aaPredicted RBP16.69■□□□□ 0.26
TSPAN3-205ENST00000558745 ZSCAN25Q6NSZ9 544 aa16.69■□□□□ 0.26
TSPAN3-205ENST00000558745 TMED8Q6PL24 325 aaPredicted RBP16.69■□□□□ 0.26
TSPAN3-205ENST00000558745 ERO1BQ86YB8 467 aa16.69■□□□□ 0.26
TSPAN3-205ENST00000558745 PTPN18Q99952 460 aa16.69■□□□□ 0.26
TSPAN3-205ENST00000558745 FSD1Q9BTV5 496 aa16.69■□□□□ 0.26
TSPAN3-205ENST00000558745 CRNKL1Q9BZJ0 848 aaKnown RBP16.69■□□□□ 0.26
TSPAN3-205ENST00000558745 DHX36Q9H2U1 1008 aaKnown RBP16.69■□□□□ 0.26
TSPAN3-205ENST00000558745 DNAJC18Q9H819 358 aa16.69■□□□□ 0.26
TSPAN3-205ENST00000558745 M0R2C6 588 aa16.68■□□□□ 0.26
TSPAN3-205ENST00000558745 IGF2BP3O00425 579 aaKnown RBP eCLIP16.68■□□□□ 0.26
TSPAN3-205ENST00000558745 TBC1D8O95759 1140 aa16.68■□□□□ 0.26
TSPAN3-205ENST00000558745 MS4A4AQ96JQ5 239 aa16.68■□□□□ 0.26
TSPAN3-205ENST00000558745 R3HDMLQ9H3Y0 253 aa16.68■□□□□ 0.26
TSPAN3-205ENST00000558745 MCM9Q9NXL9 1143 aa16.68■□□□□ 0.26
TSPAN3-205ENST00000558745 CYP2D7A0A087X1C5 515 aa16.67■□□□□ 0.26
TSPAN3-205ENST00000558745 MANSC4A6NHS7 340 aaPredicted RBP16.67■□□□□ 0.26
TSPAN3-205ENST00000558745 NOL9Q5SY16 702 aaKnown RBP16.67■□□□□ 0.26
TSPAN3-205ENST00000558745 FOXP4Q8IVH2 680 aaPredicted RBP16.67■□□□□ 0.26
TSPAN3-205ENST00000558745 SCYL3Q8IZE3 742 aa16.67■□□□□ 0.26
TSPAN3-205ENST00000558745 BRI3BPQ8WY22 251 aa16.67■□□□□ 0.26
TSPAN3-205ENST00000558745 STRBPQ96SI9 672 aaKnown RBP16.67■□□□□ 0.26
TSPAN3-205ENST00000558745 DCP1AQ9NPI6 582 aaPredicted RBP16.67■□□□□ 0.26
TSPAN3-205ENST00000558745 SLC4A4Q9Y6R1 1079 aa16.67■□□□□ 0.26
TSPAN3-205ENST00000558745 ZHX2Q9Y6X8 837 aa16.67■□□□□ 0.26
TSPAN3-205ENST00000558745 SIPA1L1O43166 1804 aa16.67■□□□□ 0.26
TSPAN3-205ENST00000558745 COL2A1P02458 1487 aaPredicted RBP16.66■□□□□ 0.26
TSPAN3-205ENST00000558745 FOCADQ5VW36 1801 aa16.66■□□□□ 0.26
TSPAN3-205ENST00000558745 TNRC18O15417 2968 aaPredicted RBP16.66■□□□□ 0.26
TSPAN3-205ENST00000558745 POLR3DP05423 398 aaPredicted RBP16.66■□□□□ 0.26
TSPAN3-205ENST00000558745 PPATQ06203 517 aa16.66■□□□□ 0.26
TSPAN3-205ENST00000558745 SREBF2Q12772 1141 aa16.66■□□□□ 0.26
TSPAN3-205ENST00000558745 IFNL1Q8IU54 200 aa16.66■□□□□ 0.26
TSPAN3-205ENST00000558745 CERS3Q8IU89 383 aa16.66■□□□□ 0.26
TSPAN3-205ENST00000558745 CRACR2BQ8N4Y2 399 aaPredicted RBP16.66■□□□□ 0.26
TSPAN3-205ENST00000558745 APPBP2Q92624 585 aa16.66■□□□□ 0.26
TSPAN3-205ENST00000558745 RILPL2Q969X0 211 aa16.66■□□□□ 0.26
TSPAN3-205ENST00000558745 MYH1P12882 1939 aa16.65■□□□□ 0.26
TSPAN3-205ENST00000558745 MYH7P12883 1935 aa16.65■□□□□ 0.26
TSPAN3-205ENST00000558745 CCL15-CCL14A0A0B4J2E2 113 aa16.65■□□□□ 0.26
TSPAN3-205ENST00000558745 TRIM6-TRIM34B2RNG4 842 aa16.65■□□□□ 0.26
TSPAN3-205ENST00000558745 CTNND1O60716 968 aaKnown RBP16.65■□□□□ 0.26
TSPAN3-205ENST00000558745 GDF11O95390 407 aa16.65■□□□□ 0.26
TSPAN3-205ENST00000558745 HLA-DOAP06340 250 aa16.65■□□□□ 0.26
TSPAN3-205ENST00000558745 PTPRAP18433 802 aa16.65■□□□□ 0.26
TSPAN3-205ENST00000558745 PPIL2Q13356 520 aa16.65■□□□□ 0.26
TSPAN3-205ENST00000558745 CCL15Q16663 113 aa16.65■□□□□ 0.26
TSPAN3-205ENST00000558745 METTL16Q86W50 562 aaKnown RBP16.65■□□□□ 0.26
TSPAN3-205ENST00000558745 SKAP1Q86WV1 359 aa16.65■□□□□ 0.26
TSPAN3-205ENST00000558745 REM2Q8IYK8 340 aaPredicted RBP16.65■□□□□ 0.26
TSPAN3-205ENST00000558745 EVI5LQ96CN4 794 aa16.65■□□□□ 0.26
TSPAN3-205ENST00000558745 HERC5Q9UII4 1024 aaKnown RBP16.65■□□□□ 0.26
TSPAN3-205ENST00000558745 TESPA1A2RU30 521 aaPredicted RBP16.64■□□□□ 0.25
TSPAN3-205ENST00000558745 CAP2P40123 477 aa16.64■□□□□ 0.25
TSPAN3-205ENST00000558745 GTF2A2P52657 109 aa16.64■□□□□ 0.25
TSPAN3-205ENST00000558745 CCDC129Q6ZRS4 1044 aa16.64■□□□□ 0.25
TSPAN3-205ENST00000558745 TTC6Q86TZ1 520 aa16.64■□□□□ 0.25
TSPAN3-205ENST00000558745 DYNLL2Q96FJ2 89 aa16.64■□□□□ 0.25
TSPAN3-205ENST00000558745 TRIM34Q9BYJ4 488 aa16.64■□□□□ 0.25
TSPAN3-205ENST00000558745 PICK1Q9NRD5 415 aa16.64■□□□□ 0.25
TSPAN3-205ENST00000558745 GSG1L2A8MUP6 293 aa16.63■□□□□ 0.25
TSPAN3-205ENST00000558745 USP17L12C9JPN9 530 aa16.63■□□□□ 0.25
TSPAN3-205ENST00000558745 USP17L21D6R901 530 aa16.63■□□□□ 0.25
TSPAN3-205ENST00000558745 GPAA1O43292 621 aa16.63■□□□□ 0.25
TSPAN3-205ENST00000558745 ZFYP08048 801 aaPredicted RBP16.63■□□□□ 0.25
TSPAN3-205ENST00000558745 INHBEP58166 350 aa16.63■□□□□ 0.25
TSPAN3-205ENST00000558745 ZMYM1Q5SVZ6 1142 aa16.63■□□□□ 0.25
TSPAN3-205ENST00000558745 FAM43AQ8N2R8 423 aa16.63■□□□□ 0.25
TSPAN3-205ENST00000558745 SLC44A5Q8NCS7 719 aa16.63■□□□□ 0.25
TSPAN3-205ENST00000558745 OSBPL3Q9H4L5 887 aa16.63■□□□□ 0.25
TSPAN3-205ENST00000558745 SERPINB13Q9UIV8 391 aa16.63■□□□□ 0.25
TSPAN3-205ENST00000558745 AFG3L2Q9Y4W6 797 aa16.63■□□□□ 0.25
TSPAN3-205ENST00000558745 CA12O43570 354 aa16.62■□□□□ 0.25
TSPAN3-205ENST00000558745 SNAPC2Q13487 334 aa16.62■□□□□ 0.25
TSPAN3-205ENST00000558745 DGKZQ13574 1117 aa16.62■□□□□ 0.25
TSPAN3-205ENST00000558745 STK11IPQ8N1F8 1099 aa16.62■□□□□ 0.25
TSPAN3-205ENST00000558745 FAM227BQ96M60 508 aa16.62■□□□□ 0.25
TSPAN3-205ENST00000558745 MCOLN1Q9GZU1 580 aa16.62■□□□□ 0.25
TSPAN3-205ENST00000558745 ATP8A2Q9NTI2 1148 aa16.62■□□□□ 0.25
TSPAN3-205ENST00000558745 CASP8AP2Q9UKL3 1982 aa16.61■□□□□ 0.25
TSPAN3-205ENST00000558745 TRIM75PA6NK02 468 aa16.61■□□□□ 0.25
TSPAN3-205ENST00000558745 BTBD19C9JJ37 291 aa16.61■□□□□ 0.25
TSPAN3-205ENST00000558745 CETPP11597 493 aa16.61■□□□□ 0.25
TSPAN3-205ENST00000558745 SHMT1P34896 483 aa16.61■□□□□ 0.25
TSPAN3-205ENST00000558745 GABPAQ06546 454 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms