RNA–Protein interactions for RNA: ENST00000558471.5

LRRC28-206, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 793 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-206ENST00000558471 SLC4A4Q9Y6R1 1079 aa15.03■□□□□ -0
LRRC28-206ENST00000558471 GPAA1O43292 621 aa15.02■□□□□ -0
LRRC28-206ENST00000558471 GSPT1P15170 499 aaKnown RBP15.02■□□□□ -0
LRRC28-206ENST00000558471 KIF23Q02241 960 aaPredicted RBP15.02■□□□□ -0
LRRC28-206ENST00000558471 MKRN3Q13064 507 aaKnown RBP15.02■□□□□ -0
LRRC28-206ENST00000558471 SPRYD7Q5W111 196 aa15.02■□□□□ -0
LRRC28-206ENST00000558471 METTL16Q86W50 562 aaKnown RBP15.02■□□□□ -0
LRRC28-206ENST00000558471 TICAM2Q86XR7 235 aa15.02■□□□□ -0
LRRC28-206ENST00000558471 WNK4Q96J92 1243 aa15.02■□□□□ -0
LRRC28-206ENST00000558471 ATP8A2Q9NTI2 1148 aa15.02■□□□□ -0
LRRC28-206ENST00000558471 MCM9Q9NXL9 1143 aa15.02■□□□□ -0
LRRC28-206ENST00000558471 PPP4R2Q9NY27 417 aa15.02■□□□□ -0
LRRC28-206ENST00000558471 SNCAIPQ9Y6H5 919 aa15.02■□□□□ -0
LRRC28-206ENST00000558471 DDX60LQ5H9U9 1706 aaKnown RBP15.02□□□□□ -0.01
LRRC28-206ENST00000558471 THSD7BQ9C0I4 1608 aa15.02□□□□□ -0.01
LRRC28-206ENST00000558471 POLR3DP05423 398 aaPredicted RBP15.01□□□□□ -0.01
LRRC28-206ENST00000558471 HLA-DOAP06340 250 aa15.01□□□□□ -0.01
LRRC28-206ENST00000558471 SDSP20132 328 aa15.01□□□□□ -0.01
LRRC28-206ENST00000558471 GJA5P36382 358 aa15.01□□□□□ -0.01
LRRC28-206ENST00000558471 PLCD1P51178 756 aa15.01□□□□□ -0.01
LRRC28-206ENST00000558471 EVX2Q03828 476 aa15.01□□□□□ -0.01
LRRC28-206ENST00000558471 TTC6Q86TZ1 520 aa15.01□□□□□ -0.01
LRRC28-206ENST00000558471 CNKSR2Q8WXI2 1034 aa15.01□□□□□ -0.01
LRRC28-206ENST00000558471 FAM227BQ96M60 508 aa15.01□□□□□ -0.01
LRRC28-206ENST00000558471 DNAJC18Q9H819 358 aa15.01□□□□□ -0.01
LRRC28-206ENST00000558471 HERC5Q9UII4 1024 aaKnown RBP15.01□□□□□ -0.01
LRRC28-206ENST00000558471 GSG1L2A8MUP6 293 aa15□□□□□ -0.01
LRRC28-206ENST00000558471 CYP2D6P10635 497 aa15□□□□□ -0.01
LRRC28-206ENST00000558471 RRP1BQ14684 758 aaKnown RBP15□□□□□ -0.01
LRRC28-206ENST00000558471 NOL9Q5SY16 702 aaKnown RBP15□□□□□ -0.01
LRRC28-206ENST00000558471 CCDC129Q6ZRS4 1044 aa15□□□□□ -0.01
LRRC28-206ENST00000558471 CRACR2BQ8N4Y2 399 aaPredicted RBP15□□□□□ -0.01
LRRC28-206ENST00000558471 OPTNQ96CV9 577 aa15□□□□□ -0.01
LRRC28-206ENST00000558471 HELLSQ9NRZ9 838 aa15□□□□□ -0.01
LRRC28-206ENST00000558471 ATAD5Q96QE3 1844 aa14.99□□□□□ -0.01
LRRC28-206ENST00000558471 A0A0D9SFI3 127 aa14.99□□□□□ -0.01
LRRC28-206ENST00000558471 PATL2C9JE40 543 aaKnown RBP14.99□□□□□ -0.01
LRRC28-206ENST00000558471 USP17L12C9JPN9 530 aa14.99□□□□□ -0.01
LRRC28-206ENST00000558471 USP17L21D6R901 530 aa14.99□□□□□ -0.01
LRRC28-206ENST00000558471 CTNND1O60716 968 aaKnown RBP14.99□□□□□ -0.01
LRRC28-206ENST00000558471 GNAT2P19087 354 aa14.99□□□□□ -0.01
LRRC28-206ENST00000558471 NMIQ13287 307 aaPredicted RBP14.99□□□□□ -0.01
LRRC28-206ENST00000558471 ERO1BQ86YB8 467 aa14.99□□□□□ -0.01
LRRC28-206ENST00000558471 SCYL3Q8IZE3 742 aa14.99□□□□□ -0.01
LRRC28-206ENST00000558471 EHD4Q9H223 541 aa14.99□□□□□ -0.01
LRRC28-206ENST00000558471 SERPINB13Q9UIV8 391 aa14.99□□□□□ -0.01
LRRC28-206ENST00000558471 DOCK1Q14185 1865 aa14.99□□□□□ -0.01
LRRC28-206ENST00000558471 CYP2D7A0A087X1C5 515 aa14.98□□□□□ -0.01
LRRC28-206ENST00000558471 SPDYE5A6NIY4 337 aa14.98□□□□□ -0.01
LRRC28-206ENST00000558471 SMIM22K7EJ46 135 aa14.98□□□□□ -0.01
LRRC28-206ENST00000558471 APPP05067 770 aa14.98□□□□□ -0.01
LRRC28-206ENST00000558471 ZBTB48P10074 688 aaPredicted RBP14.98□□□□□ -0.01
LRRC28-206ENST00000558471 MAP2K1Q02750 393 aaPredicted RBP14.98□□□□□ -0.01
LRRC28-206ENST00000558471 MCMDC2Q4G0Z9 681 aa14.98□□□□□ -0.01
LRRC28-206ENST00000558471 C12orf60Q5U649 245 aa14.98□□□□□ -0.01
LRRC28-206ENST00000558471 GIMAP6Q6P9H5 292 aa14.98□□□□□ -0.01
LRRC28-206ENST00000558471 CTR9Q6PD62 1173 aa14.98□□□□□ -0.01
LRRC28-206ENST00000558471 OTUD5Q96G74 571 aa14.98□□□□□ -0.01
LRRC28-206ENST00000558471 DDRGK1Q96HY6 314 aa14.98□□□□□ -0.01
LRRC28-206ENST00000558471 TRIM34Q9BYJ4 488 aa14.98□□□□□ -0.01
LRRC28-206ENST00000558471 EPB41L4AQ9HCS5 686 aaPredicted RBP14.98□□□□□ -0.01
LRRC28-206ENST00000558471 WBP1LQ9NX94 342 aa14.98□□□□□ -0.01
LRRC28-206ENST00000558471 PCNTO95613 3336 aa14.98□□□□□ -0.01
LRRC28-206ENST00000558471 LAMB1P07942 1786 aa14.98□□□□□ -0.01
LRRC28-206ENST00000558471 PHIPQ8WWQ0 1821 aa14.97□□□□□ -0.01
LRRC28-206ENST00000558471 CAP2P40123 477 aa14.97□□□□□ -0.01
LRRC28-206ENST00000558471 JAG1P78504 1218 aa14.97□□□□□ -0.01
LRRC28-206ENST00000558471 PPATQ06203 517 aa14.97□□□□□ -0.01
LRRC28-206ENST00000558471 GABPAQ06546 454 aa14.97□□□□□ -0.01
LRRC28-206ENST00000558471 TATDN1Q6P1N9 297 aa14.97□□□□□ -0.01
LRRC28-206ENST00000558471 IFNL3Q8IZI9 196 aa14.97□□□□□ -0.01
LRRC28-206ENST00000558471 MYH8P13535 1937 aa14.96□□□□□ -0.01
LRRC28-206ENST00000558471 HIP1O00291 1037 aa14.96□□□□□ -0.01
LRRC28-206ENST00000558471 IRF6O14896 467 aa14.96□□□□□ -0.01
LRRC28-206ENST00000558471 FOXP2O15409 715 aa14.96□□□□□ -0.01
LRRC28-206ENST00000558471 PTPRAP18433 802 aa14.96□□□□□ -0.01
LRRC28-206ENST00000558471 TM4SF4P48230 202 aa14.96□□□□□ -0.01
LRRC28-206ENST00000558471 VPS53Q5VIR6 699 aa14.96□□□□□ -0.01
LRRC28-206ENST00000558471 CWC27Q6UX04 472 aaKnown RBP14.96□□□□□ -0.01
LRRC28-206ENST00000558471 ZNF589Q86UQ0 364 aaPredicted RBP14.96□□□□□ -0.01
LRRC28-206ENST00000558471 REM2Q8IYK8 340 aaPredicted RBP14.96□□□□□ -0.01
LRRC28-206ENST00000558471 DYNLL2Q96FJ2 89 aa14.96□□□□□ -0.01
LRRC28-206ENST00000558471 MS4A4AQ96JQ5 239 aa14.96□□□□□ -0.01
LRRC28-206ENST00000558471 PICK1Q9NRD5 415 aa14.96□□□□□ -0.01
LRRC28-206ENST00000558471 DIAPH3Q9NSV4 1193 aa14.96□□□□□ -0.01
LRRC28-206ENST00000558471 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.96□□□□□ -0.01
LRRC28-206ENST00000558471 MANSC4A6NHS7 340 aaPredicted RBP14.95□□□□□ -0.02
LRRC28-206ENST00000558471 GDF11O95390 407 aa14.95□□□□□ -0.02
LRRC28-206ENST00000558471 HSPA1AP0DMV8 641 aaKnown RBP14.95□□□□□ -0.02
LRRC28-206ENST00000558471 HSPA1BP0DMV9 641 aaKnown RBP14.95□□□□□ -0.02
LRRC28-206ENST00000558471 SHMT1P34896 483 aa14.95□□□□□ -0.02
LRRC28-206ENST00000558471 TDO2P48775 406 aa14.95□□□□□ -0.02
LRRC28-206ENST00000558471 PPIL2Q13356 520 aa14.95□□□□□ -0.02
LRRC28-206ENST00000558471 SHROOM1Q2M3G4 852 aaPredicted RBP14.95□□□□□ -0.02
LRRC28-206ENST00000558471 SBK1Q52WX2 424 aa14.95□□□□□ -0.02
LRRC28-206ENST00000558471 CCDC84Q86UT8 332 aaPredicted RBP14.95□□□□□ -0.02
LRRC28-206ENST00000558471 AMOTL1Q8IY63 956 aa14.95□□□□□ -0.02
LRRC28-206ENST00000558471 SLC44A5Q8NCS7 719 aa14.95□□□□□ -0.02
LRRC28-206ENST00000558471 ARPP21Q9UBL0 812 aaPredicted RBP14.95□□□□□ -0.02
LRRC28-206ENST00000558471 ZHX2Q9Y6X8 837 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms