RNA–Protein interactions for RNA: ENST00000558288.1

HMG20A-204, Transcript of high mobility group 20A, humanhuman

Gene HMG20A, Length 3,558 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-204ENST00000558288 KSR2Q6VAB6 950 aa5.77□□□□□ -1.49
HMG20A-204ENST00000558288 RIC3Q7Z5B4 369 aa5.77□□□□□ -1.49
HMG20A-204ENST00000558288 CTAGE6Q86UF2 777 aa5.77□□□□□ -1.49
HMG20A-204ENST00000558288 PPFIBP1Q86W92 1011 aa5.77□□□□□ -1.49
HMG20A-204ENST00000558288 TMEM139Q8IV31 216 aa5.77□□□□□ -1.49
HMG20A-204ENST00000558288 CTAGE4Q8IX94 777 aa5.77□□□□□ -1.49
HMG20A-204ENST00000558288 NEUROD6Q96NK8 337 aa5.77□□□□□ -1.49
HMG20A-204ENST00000558288 HSD3B7Q9H2F3 369 aa5.77□□□□□ -1.49
HMG20A-204ENST00000558288 POLR3EQ9NVU0 708 aa5.77□□□□□ -1.49
HMG20A-204ENST00000558288 CDC23Q9UJX2 597 aa5.77□□□□□ -1.49
HMG20A-204ENST00000558288 ITSN1Q15811 1721 aa5.77□□□□□ -1.49
HMG20A-204ENST00000558288 MROH7-TTC4A0A0A0MT08 1334 aa5.77□□□□□ -1.49
HMG20A-204ENST00000558288 PCDH11XQ9BZA7 1347 aa5.77□□□□□ -1.49
HMG20A-204ENST00000558288 PCDH11YQ9BZA8 1340 aa5.77□□□□□ -1.49
HMG20A-204ENST00000558288 PEAK1Q9H792 1746 aa5.77□□□□□ -1.49
HMG20A-204ENST00000558288 PALLDQ8WX93 1383 aa5.77□□□□□ -1.49
HMG20A-204ENST00000558288 E7EWF7 191 aa5.77□□□□□ -1.49
HMG20A-204ENST00000558288 GOLIM4O00461 696 aa5.77□□□□□ -1.49
HMG20A-204ENST00000558288 FDPSP14324 419 aaKnown RBP5.77□□□□□ -1.49
HMG20A-204ENST00000558288 LIG3P49916 1009 aa5.77□□□□□ -1.49
HMG20A-204ENST00000558288 TRAPPC3LQ5T215 181 aa5.77□□□□□ -1.49
HMG20A-204ENST00000558288 CCDC91Q7Z6B0 441 aa5.77□□□□□ -1.49
HMG20A-204ENST00000558288 EFCAB13Q8IY85 973 aa5.77□□□□□ -1.49
HMG20A-204ENST00000558288 TC2NQ8N9U0 490 aa5.77□□□□□ -1.49
HMG20A-204ENST00000558288 AFAP1L1Q8TED9 768 aa5.77□□□□□ -1.49
HMG20A-204ENST00000558288 GDAP1L1Q96MZ0 367 aa5.77□□□□□ -1.49
HMG20A-204ENST00000558288 CLIC6Q96NY7 704 aa5.77□□□□□ -1.49
HMG20A-204ENST00000558288 HOOK1Q9UJC3 728 aaKnown RBP5.77□□□□□ -1.49
HMG20A-204ENST00000558288 DBNLQ9UJU6 430 aaKnown RBP5.77□□□□□ -1.49
HMG20A-204ENST00000558288 ASAP1Q9ULH1 1129 aa5.77□□□□□ -1.49
HMG20A-204ENST00000558288 NFE2L3Q9Y4A8 694 aa5.77□□□□□ -1.49
HMG20A-204ENST00000558288 ZNF609O15014 1411 aa5.77□□□□□ -1.49
HMG20A-204ENST00000558288 CRYBG1Q9Y4K1 1723 aa5.77□□□□□ -1.49
HMG20A-204ENST00000558288 KLF18A0A0U1RQI7 1052 aa5.76□□□□□ -1.49
HMG20A-204ENST00000558288 RNF40O75150 1001 aa5.76□□□□□ -1.49
HMG20A-204ENST00000558288 TFCP2Q12800 502 aa5.76□□□□□ -1.49
HMG20A-204ENST00000558288 SPECC1Q5M775 1068 aa5.76□□□□□ -1.49
HMG20A-204ENST00000558288 AXDND1Q5T1B0 1012 aaPredicted RBP5.76□□□□□ -1.49
HMG20A-204ENST00000558288 CCDC102BQ68D86 513 aa5.76□□□□□ -1.49
HMG20A-204ENST00000558288 BRAPQ7Z569 592 aa5.76□□□□□ -1.49
HMG20A-204ENST00000558288 JMYQ8N9B5 988 aa5.76□□□□□ -1.49
HMG20A-204ENST00000558288 L1RE1Q9UN81 338 aa5.76□□□□□ -1.49
HMG20A-204ENST00000558288 MON2Q7Z3U7 1717 aa5.76□□□□□ -1.49
HMG20A-204ENST00000558288 KDRP35968 1356 aa5.76□□□□□ -1.49
HMG20A-204ENST00000558288 LOC102724428A0A0B4J2F2 783 aa5.76□□□□□ -1.49
HMG20A-204ENST00000558288 A0A0U1RQJ8 604 aa5.76□□□□□ -1.49
HMG20A-204ENST00000558288 DISP2A7MBM2 1401 aa5.76□□□□□ -1.49
HMG20A-204ENST00000558288 KIF28PB7ZC32 967 aa5.76□□□□□ -1.49
HMG20A-204ENST00000558288 AKR1B15C9JRZ8 316 aaPredicted RBP5.76□□□□□ -1.49
HMG20A-204ENST00000558288 ERLIN2O94905 339 aa5.76□□□□□ -1.49
HMG20A-204ENST00000558288 DDX58O95786 925 aaKnown RBP5.76□□□□□ -1.49
HMG20A-204ENST00000558288 YBX3P16989 372 aaKnown RBP eCLIP5.76□□□□□ -1.493e-6■□□□□ 8.1
HMG20A-204ENST00000558288 SIK1P57059 783 aa5.76□□□□□ -1.49
HMG20A-204ENST00000558288 TNS2Q63HR2 1409 aa5.76□□□□□ -1.49
HMG20A-204ENST00000558288 MMS22LQ6ZRQ5 1243 aa5.76□□□□□ -1.49
HMG20A-204ENST00000558288 TADA2BQ86TJ2 420 aa5.76□□□□□ -1.49
HMG20A-204ENST00000558288 FLAD1Q8NFF5 587 aa5.76□□□□□ -1.49
HMG20A-204ENST00000558288 HNRNPLLQ8WVV9 542 aaKnown RBP5.76□□□□□ -1.49
HMG20A-204ENST00000558288 ATRIPQ8WXE1 791 aa5.76□□□□□ -1.49
HMG20A-204ENST00000558288 DBNDD2Q9BQY9 259 aa5.76□□□□□ -1.49
HMG20A-204ENST00000558288 INTS13Q9NVM9 706 aa5.76□□□□□ -1.49
HMG20A-204ENST00000558288 BABAM1Q9NWV8 329 aa5.76□□□□□ -1.49
HMG20A-204ENST00000558288 RAI14Q9P0K7 980 aa5.76□□□□□ -1.49
HMG20A-204ENST00000558288 PCDHA5Q9Y5H7 936 aa5.76□□□□□ -1.49
HMG20A-204ENST00000558288 PPFIA4O75335 1185 aa5.76□□□□□ -1.49
HMG20A-204ENST00000558288 ATP5JP18859 108 aa5.76□□□□□ -1.49
HMG20A-204ENST00000558288 PDE4BQ07343 736 aa5.76□□□□□ -1.49
HMG20A-204ENST00000558288 NEXNQ0ZGT2 675 aa5.76□□□□□ -1.49
HMG20A-204ENST00000558288 GRM1Q13255 1194 aa5.76□□□□□ -1.49
HMG20A-204ENST00000558288 TNNI3KQ59H18 835 aa5.76□□□□□ -1.49
HMG20A-204ENST00000558288 MCTP2Q6DN12 878 aa5.76□□□□□ -1.49
HMG20A-204ENST00000558288 KLHL10Q6JEL2 608 aa5.76□□□□□ -1.49
HMG20A-204ENST00000558288 IFNL2Q8IZJ0 200 aa5.76□□□□□ -1.49
HMG20A-204ENST00000558288 SLC35F6Q8N357 371 aa5.76□□□□□ -1.49
HMG20A-204ENST00000558288 LINS1Q8NG48 757 aa5.76□□□□□ -1.49
HMG20A-204ENST00000558288 ZNF274Q96GC6 653 aaPredicted RBP5.76□□□□□ -1.49
HMG20A-204ENST00000558288 CDC5LQ99459 802 aaKnown RBP5.76□□□□□ -1.49
HMG20A-204ENST00000558288 FPGT-TNNI3KV9GXZ4 949 aa5.76□□□□□ -1.49
HMG20A-204ENST00000558288 NEDD4P46934 1319 aa5.76□□□□□ -1.49
HMG20A-204ENST00000558288 PRAMEF22A3QJZ6 481 aa5.75□□□□□ -1.49
HMG20A-204ENST00000558288 LRRIQ3A6PVS8 624 aaPredicted RBP5.75□□□□□ -1.49
HMG20A-204ENST00000558288 FOXN1O15353 648 aa5.75□□□□□ -1.49
HMG20A-204ENST00000558288 MYL6BP14649 208 aa5.75□□□□□ -1.49
HMG20A-204ENST00000558288 CDC27P30260 824 aa5.75□□□□□ -1.49
HMG20A-204ENST00000558288 CCT5P48643 541 aa5.75□□□□□ -1.49
HMG20A-204ENST00000558288 LONRF3Q496Y0 759 aa5.75□□□□□ -1.49
HMG20A-204ENST00000558288 ANKRD20A12PQ8NF67 263 aa5.75□□□□□ -1.49
HMG20A-204ENST00000558288 MED4Q9NPJ6 270 aa5.75□□□□□ -1.49
HMG20A-204ENST00000558288 ALS2Q96Q42 1657 aa5.75□□□□□ -1.49
HMG20A-204ENST00000558288 CACNA1FO60840 1977 aa5.75□□□□□ -1.49
HMG20A-204ENST00000558288 A0A087WUV0 522 aaPredicted RBP5.75□□□□□ -1.49
HMG20A-204ENST00000558288 H0YHG0 523 aa5.75□□□□□ -1.49
HMG20A-204ENST00000558288 ZPR1O75312 459 aa5.75□□□□□ -1.49
HMG20A-204ENST00000558288 SETQ01105 290 aaPredicted RBP5.75□□□□□ -1.49
HMG20A-204ENST00000558288 NCAPH2Q6IBW4 605 aa5.75□□□□□ -1.49
HMG20A-204ENST00000558288 SHC4Q6S5L8 630 aa5.75□□□□□ -1.49
HMG20A-204ENST00000558288 IGSF22Q8N9C0 903 aa5.75□□□□□ -1.49
HMG20A-204ENST00000558288 CCDC148Q8NFR7 591 aa5.75□□□□□ -1.49
HMG20A-204ENST00000558288 RIN2Q8WYP3 895 aaPredicted RBP5.75□□□□□ -1.49
HMG20A-204ENST00000558288 PIGBQ92521 554 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms