RNA–Protein interactions for RNA: ENST00000558172.5

LRRC28-204, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 644 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-204ENST00000558172 CDAN1Q8IWY9 1227 aa12.49□□□□□ -0.41
LRRC28-204ENST00000558172 CRACR2BQ8N4Y2 399 aaPredicted RBP12.49□□□□□ -0.41
LRRC28-204ENST00000558172 GBA2Q9HCG7 927 aaPredicted RBP12.49□□□□□ -0.41
LRRC28-204ENST00000558172 EPB41L4AQ9HCS5 686 aaPredicted RBP12.49□□□□□ -0.41
LRRC28-204ENST00000558172 CTNNA3Q9UI47 895 aa12.49□□□□□ -0.41
LRRC28-204ENST00000558172 SERPINB13Q9UIV8 391 aa12.49□□□□□ -0.41
LRRC28-204ENST00000558172 ATAD5Q96QE3 1844 aa12.48□□□□□ -0.41
LRRC28-204ENST00000558172 MINDY4BA8MYZ0 360 aa12.48□□□□□ -0.41
LRRC28-204ENST00000558172 FOXP2O15409 715 aa12.48□□□□□ -0.41
LRRC28-204ENST00000558172 USP2O75604 605 aaPredicted RBP12.48□□□□□ -0.41
LRRC28-204ENST00000558172 SLC3A2P08195 630 aaKnown RBP12.48□□□□□ -0.41
LRRC28-204ENST00000558172 PLCD1P51178 756 aa12.48□□□□□ -0.41
LRRC28-204ENST00000558172 APLP1P51693 650 aa12.48□□□□□ -0.41
LRRC28-204ENST00000558172 FMR1Q06787 632 aaKnown RBP eCLIP12.48□□□□□ -0.41
LRRC28-204ENST00000558172 TTLL12Q14166 644 aaPredicted RBP12.48□□□□□ -0.41
LRRC28-204ENST00000558172 IL25Q9H293 177 aa12.48□□□□□ -0.41
LRRC28-204ENST00000558172 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.48□□□□□ -0.41
LRRC28-204ENST00000558172 ZNF287Q9HBT7 754 aa12.48□□□□□ -0.41
LRRC28-204ENST00000558172 SWAP70Q9UH65 585 aa12.48□□□□□ -0.41
LRRC28-204ENST00000558172 SSC5DA1L4H1 1573 aa12.47□□□□□ -0.41
LRRC28-204ENST00000558172 EPB41L2O43491 1005 aaKnown RBP12.47□□□□□ -0.41
LRRC28-204ENST00000558172 REC8O95072 547 aa12.47□□□□□ -0.41
LRRC28-204ENST00000558172 C1QTNF8P60827 252 aa12.47□□□□□ -0.41
LRRC28-204ENST00000558172 MIGA2Q7L4E1 593 aa12.47□□□□□ -0.41
LRRC28-204ENST00000558172 MAP4K1Q92918 833 aa12.47□□□□□ -0.41
LRRC28-204ENST00000558172 KLRG1Q96E93 195 aa12.47□□□□□ -0.41
LRRC28-204ENST00000558172 ZNF112Q9UJU3 913 aa12.47□□□□□ -0.41
LRRC28-204ENST00000558172 ANAPC4Q9UJX5 808 aa12.47□□□□□ -0.41
LRRC28-204ENST00000558172 ANGEL1Q9UNK9 670 aaKnown RBP12.47□□□□□ -0.41
LRRC28-204ENST00000558172 U3KPZ7 1027 aaPredicted RBP12.47□□□□□ -0.41
LRRC28-204ENST00000558172 OTOFQ9HC10 1997 aa12.47□□□□□ -0.41
LRRC28-204ENST00000558172 ROBO3Q96MS0 1386 aa12.46□□□□□ -0.41
LRRC28-204ENST00000558172 ZNF213O14771 459 aa12.46□□□□□ -0.41
LRRC28-204ENST00000558172 CYP2D6P10635 497 aa12.46□□□□□ -0.41
LRRC28-204ENST00000558172 MAP3K9P80192 1104 aa12.46□□□□□ -0.41
LRRC28-204ENST00000558172 GABPAQ06546 454 aa12.46□□□□□ -0.41
LRRC28-204ENST00000558172 PPARAQ07869 468 aa12.46□□□□□ -0.41
LRRC28-204ENST00000558172 PRKG1Q13976 671 aa12.46□□□□□ -0.41
LRRC28-204ENST00000558172 IMMTQ16891 758 aaKnown RBP12.46□□□□□ -0.41
LRRC28-204ENST00000558172 TATDN1Q6P1N9 297 aa12.46□□□□□ -0.41
LRRC28-204ENST00000558172 C16orf86Q6ZW13 317 aa12.46□□□□□ -0.41
LRRC28-204ENST00000558172 ANKRD13AQ8IZ07 590 aa12.46□□□□□ -0.41
LRRC28-204ENST00000558172 LSG1Q9H089 658 aaKnown RBP12.46□□□□□ -0.41
LRRC28-204ENST00000558172 ANO2Q9NQ90 1003 aa12.46□□□□□ -0.41
LRRC28-204ENST00000558172 CREBZFQ9NS37 354 aa12.46□□□□□ -0.41
LRRC28-204ENST00000558172 GINM1Q9NU53 330 aa12.46□□□□□ -0.41
LRRC28-204ENST00000558172 DOCK1Q14185 1865 aa12.46□□□□□ -0.42
LRRC28-204ENST00000558172 CYP2D7A0A087X1C5 515 aa12.45□□□□□ -0.42
LRRC28-204ENST00000558172 PHF20L1A8MW92 1017 aa12.45□□□□□ -0.42
LRRC28-204ENST00000558172 CTNND1O60716 968 aaKnown RBP12.45□□□□□ -0.42
LRRC28-204ENST00000558172 PCP11498 1178 aaKnown RBP12.45□□□□□ -0.42
LRRC28-204ENST00000558172 NT5C2P49902 561 aa12.45□□□□□ -0.42
LRRC28-204ENST00000558172 PTH1RQ03431 593 aa12.45□□□□□ -0.42
LRRC28-204ENST00000558172 PDE4BQ07343 736 aa12.45□□□□□ -0.42
LRRC28-204ENST00000558172 SLC4A8Q2Y0W8 1093 aa12.45□□□□□ -0.42
LRRC28-204ENST00000558172 LDLRAD1Q5T700 205 aa12.45□□□□□ -0.42
LRRC28-204ENST00000558172 SAPCD2Q86UD0 394 aa12.45□□□□□ -0.42
LRRC28-204ENST00000558172 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.45□□□□□ -0.42
LRRC28-204ENST00000558172 HHIPL1Q96JK4 782 aa12.45□□□□□ -0.42
LRRC28-204ENST00000558172 WRNIP1Q96S55 665 aa12.45□□□□□ -0.42
LRRC28-204ENST00000558172 CSADQ9Y600 493 aa12.45□□□□□ -0.42
LRRC28-204ENST00000558172 TLL2Q9Y6L7 1015 aa12.45□□□□□ -0.42
LRRC28-204ENST00000558172 UBE2Q2LH0YL09 131 aa12.44□□□□□ -0.42
LRRC28-204ENST00000558172 CDK8P49336 464 aa12.44□□□□□ -0.42
LRRC28-204ENST00000558172 HUNKP57058 714 aa12.44□□□□□ -0.42
LRRC28-204ENST00000558172 CERKLQ49MI3 558 aaPredicted RBP12.44□□□□□ -0.42
LRRC28-204ENST00000558172 CCDC17Q96LX7 622 aa12.44□□□□□ -0.42
LRRC28-204ENST00000558172 RNF41Q9H4P4 317 aaPredicted RBP12.44□□□□□ -0.42
LRRC28-204ENST00000558172 DNAJC18Q9H819 358 aa12.44□□□□□ -0.42
LRRC28-204ENST00000558172 MKNK2Q9HBH9 465 aa12.44□□□□□ -0.42
LRRC28-204ENST00000558172 ABT1Q9ULW3 272 aaKnown RBP12.44□□□□□ -0.42
LRRC28-204ENST00000558172 RBM8AQ9Y5S9 174 aaKnown RBP12.44□□□□□ -0.42
LRRC28-204ENST00000558172 FAM196BA6NMK8 535 aa12.43□□□□□ -0.42
LRRC28-204ENST00000558172 FGRP09769 529 aa12.43□□□□□ -0.42
LRRC28-204ENST00000558172 HSPA6P17066 643 aa12.43□□□□□ -0.42
LRRC28-204ENST00000558172 SHMT1P34896 483 aa12.43□□□□□ -0.42
LRRC28-204ENST00000558172 CAP2P40123 477 aa12.43□□□□□ -0.42
LRRC28-204ENST00000558172 NOL9Q5SY16 702 aaKnown RBP12.43□□□□□ -0.42
LRRC28-204ENST00000558172 RNF20Q5VTR2 975 aa12.43□□□□□ -0.42
LRRC28-204ENST00000558172 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.43□□□□□ -0.42
LRRC28-204ENST00000558172 MOB2Q70IA6 237 aa12.43□□□□□ -0.42
LRRC28-204ENST00000558172 ZNF444Q8N0Y2 327 aaPredicted RBP12.43□□□□□ -0.42
LRRC28-204ENST00000558172 DYNLL2Q96FJ2 89 aa12.43□□□□□ -0.42
LRRC28-204ENST00000558172 CABP5Q9NP86 173 aa12.43□□□□□ -0.42
LRRC28-204ENST00000558172 FZD1Q9UP38 647 aa12.43□□□□□ -0.42
LRRC28-204ENST00000558172 PHIPQ8WWQ0 1821 aa12.42□□□□□ -0.42
LRRC28-204ENST00000558172 ASNSP08243 561 aa12.42□□□□□ -0.42
LRRC28-204ENST00000558172 SLURP2P0DP57 97 aa12.42□□□□□ -0.42
LRRC28-204ENST00000558172 INPP5BP32019 993 aa12.42□□□□□ -0.42
LRRC28-204ENST00000558172 HAND2P61296 217 aa12.42□□□□□ -0.42
LRRC28-204ENST00000558172 EVX2Q03828 476 aa12.42□□□□□ -0.42
LRRC28-204ENST00000558172 CTDSPL2Q05D32 466 aa12.42□□□□□ -0.42
LRRC28-204ENST00000558172 NECTIN1Q15223 517 aa12.42□□□□□ -0.42
LRRC28-204ENST00000558172 AKNAD1Q5T1N1 836 aa12.42□□□□□ -0.42
LRRC28-204ENST00000558172 RGMBQ6NW40 437 aa12.42□□□□□ -0.42
LRRC28-204ENST00000558172 MFSD6Q6ZSS7 791 aa12.42□□□□□ -0.42
LRRC28-204ENST00000558172 SCYL3Q8IZE3 742 aa12.42□□□□□ -0.42
LRRC28-204ENST00000558172 STAG1Q8WVM7 1258 aa12.42□□□□□ -0.42
LRRC28-204ENST00000558172 ZKSCAN4Q969J2 545 aaPredicted RBP12.42□□□□□ -0.42
LRRC28-204ENST00000558172 SLC10A4Q96EP9 437 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 185 ms