RNA–Protein interactions for RNA: ENST00000558103.1

CLPX-202, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 5

Gene CLPX, Length 605 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-202ENST00000558103 NFKBIEO00221 500 aa8.88□□□□□ -0.99
CLPX-202ENST00000558103 IGHA2P01877 340 aa8.88□□□□□ -0.99
CLPX-202ENST00000558103 ELNP15502 786 aa8.88□□□□□ -0.99
CLPX-202ENST00000558103 GRIK4Q16099 956 aa8.88□□□□□ -0.99
CLPX-202ENST00000558103 CD163Q86VB7 1156 aa8.88□□□□□ -0.99
CLPX-202ENST00000558103 FBXO11Q86XK2 927 aa8.88□□□□□ -0.99
CLPX-202ENST00000558103 UNC5CLQ8IV45 518 aa8.88□□□□□ -0.99
CLPX-202ENST00000558103 FMR1NBQ8N0W7 255 aaPredicted RBP8.88□□□□□ -0.99
CLPX-202ENST00000558103 MUC3BQ9H195 1237 aa8.88□□□□□ -0.99
CLPX-202ENST00000558103 DCTN4Q9UJW0 460 aa8.88□□□□□ -0.99
CLPX-202ENST00000558103 TULP4Q9NRJ4 1543 aa8.88□□□□□ -0.99
CLPX-202ENST00000558103 TNS1Q9HBL0 1735 aaKnown RBP8.88□□□□□ -0.99
CLPX-202ENST00000558103 BLMP54132 1417 aaPredicted RBP8.88□□□□□ -0.99
CLPX-202ENST00000558103 THSD7AQ9UPZ6 1657 aa8.88□□□□□ -0.99
CLPX-202ENST00000558103 DHX57Q6P158 1386 aaKnown RBP8.87□□□□□ -0.99
CLPX-202ENST00000558103 EDN3P14138 238 aa8.87□□□□□ -0.99
CLPX-202ENST00000558103 ACPPP15309 386 aa8.87□□□□□ -0.99
CLPX-202ENST00000558103 KRT28Q7Z3Y7 464 aa8.87□□□□□ -0.99
CLPX-202ENST00000558103 PPME1Q9Y570 386 aa8.87□□□□□ -0.99
CLPX-202ENST00000558103 ARHGEF10O15013 1369 aa8.86□□□□□ -0.99
CLPX-202ENST00000558103 TRPA1O75762 1119 aa8.86□□□□□ -0.99
CLPX-202ENST00000558103 APBA3O96018 575 aa8.86□□□□□ -0.99
CLPX-202ENST00000558103 CDC27P30260 824 aa8.86□□□□□ -0.99
CLPX-202ENST00000558103 AEBP1Q8IUX7 1158 aa8.86□□□□□ -0.99
CLPX-202ENST00000558103 OSMRQ99650 979 aa8.86□□□□□ -0.99
CLPX-202ENST00000558103 NIF3L1Q9GZT8 377 aa8.86□□□□□ -0.99
CLPX-202ENST00000558103 LACRTQ9GZZ8 138 aa8.86□□□□□ -0.99
CLPX-202ENST00000558103 ADAM19Q9H013 955 aa8.86□□□□□ -0.99
CLPX-202ENST00000558103 KIAA1210Q9ULL0 1709 aa8.85□□□□□ -0.99
CLPX-202ENST00000558103 SCO2A0A1W2PP80 73 aa8.85□□□□□ -0.99
CLPX-202ENST00000558103 PDE2AO00408 941 aaPredicted RBP8.85□□□□□ -0.99
CLPX-202ENST00000558103 GPR182O15218 404 aa8.85□□□□□ -0.99
CLPX-202ENST00000558103 CHRNA4P43681 627 aa8.85□□□□□ -0.99
CLPX-202ENST00000558103 VPS72Q15906 364 aa8.85□□□□□ -0.99
CLPX-202ENST00000558103 ADAMTSL4Q6UY14 1074 aa8.85□□□□□ -0.99
CLPX-202ENST00000558103 TMEM102Q8N9M5 508 aaPredicted RBP8.85□□□□□ -0.99
CLPX-202ENST00000558103 NXPE3Q969Y0 559 aa8.85□□□□□ -0.99
CLPX-202ENST00000558103 DMRTB1Q96MA1 342 aa8.85□□□□□ -0.99
CLPX-202ENST00000558103 PRAM1Q96QH2 718 aa8.85□□□□□ -0.99
CLPX-202ENST00000558103 NACC1Q96RE7 527 aa8.85□□□□□ -0.99
CLPX-202ENST00000558103 RAB3GAP2Q9H2M9 1393 aa8.85□□□□□ -0.99
CLPX-202ENST00000558103 ATP7BP35670 1465 aa8.84□□□□□ -0.99
CLPX-202ENST00000558103 C9orf172C9J069 976 aa8.84□□□□□ -0.99
CLPX-202ENST00000558103 DEAF1O75398 565 aaPredicted RBP8.84□□□□□ -0.99
CLPX-202ENST00000558103 POLR3DP05423 398 aaPredicted RBP8.84□□□□□ -0.99
CLPX-202ENST00000558103 SELPP16109 830 aa8.84□□□□□ -0.99
CLPX-202ENST00000558103 PTPRAP18433 802 aa8.84□□□□□ -0.99
CLPX-202ENST00000558103 ORC1Q13415 861 aa8.84□□□□□ -0.99
CLPX-202ENST00000558103 PEAR1Q5VY43 1037 aaPredicted RBP8.84□□□□□ -0.99
CLPX-202ENST00000558103 TMC7Q7Z402 723 aa8.84□□□□□ -0.99
CLPX-202ENST00000558103 GALNT12Q8IXK2 581 aa8.84□□□□□ -0.99
CLPX-202ENST00000558103 ZKSCAN3Q9BRR0 538 aa8.84□□□□□ -0.99
CLPX-202ENST00000558103 PRR36Q9H6K5 1346 aa8.83□□□□□ -1
CLPX-202ENST00000558103 CPNE3O75131 537 aaKnown RBP8.83□□□□□ -1
CLPX-202ENST00000558103 MAPK1P28482 360 aa8.83□□□□□ -1
CLPX-202ENST00000558103 SAFB2Q14151 953 aaKnown RBP eCLIP8.83□□□□□ -1
CLPX-202ENST00000558103 SETDB1Q15047 1291 aa8.83□□□□□ -1
CLPX-202ENST00000558103 USPL1Q5W0Q7 1092 aa8.83□□□□□ -1
CLPX-202ENST00000558103 MAP4K3Q8IVH8 894 aa8.83□□□□□ -1
CLPX-202ENST00000558103 ALKBH8Q96BT7 664 aaKnown RBP8.83□□□□□ -1
CLPX-202ENST00000558103 LENG1Q96BZ8 264 aaPredicted RBP8.83□□□□□ -1
CLPX-202ENST00000558103 HHIPQ96QV1 700 aa8.83□□□□□ -1
CLPX-202ENST00000558103 DNAJC25Q9H1X3 360 aa8.83□□□□□ -1
CLPX-202ENST00000558103 SRA1Q9HD15 236 aaKnown RBP8.83□□□□□ -1
CLPX-202ENST00000558103 SH2B1Q9NRF2 756 aaPredicted RBP8.83□□□□□ -1
CLPX-202ENST00000558103 LATS2Q9NRM7 1088 aa8.83□□□□□ -1
CLPX-202ENST00000558103 EIF3AQ14152 1382 aaKnown RBP8.83□□□□□ -1
CLPX-202ENST00000558103 NRKQ7Z2Y5 1582 aa8.82□□□□□ -1
CLPX-202ENST00000558103 LINC01387J3KSC0 135 aa8.82□□□□□ -1
CLPX-202ENST00000558103 EIF1AYO14602 144 aaKnown RBP8.82□□□□□ -1
CLPX-202ENST00000558103 DOC2BQ14184 412 aa8.82□□□□□ -1
CLPX-202ENST00000558103 IGF2-ASQ6U949 168 aa8.82□□□□□ -1
CLPX-202ENST00000558103 PMFBP1Q8TBY8 1022 aa8.82□□□□□ -1
CLPX-202ENST00000558103 RREB1Q92766 1687 aa8.81□□□□□ -1
CLPX-202ENST00000558103 FAM177BA6PVY3 158 aa8.81□□□□□ -1
CLPX-202ENST00000558103 DLL1O00548 723 aa8.81□□□□□ -1
CLPX-202ENST00000558103 PLCB3Q01970 1234 aa8.81□□□□□ -1
CLPX-202ENST00000558103 NRG1Q02297 640 aaPredicted RBP8.81□□□□□ -1
CLPX-202ENST00000558103 SHISA2Q6UWI4 295 aa8.81□□□□□ -1
CLPX-202ENST00000558103 DEFB132Q7Z7B7 95 aa8.81□□□□□ -1
CLPX-202ENST00000558103 LMO7Q8WWI1 1683 aa8.81□□□□□ -1
CLPX-202ENST00000558103 A0A1W2PP55 124 aa8.8□□□□□ -1
CLPX-202ENST00000558103 FAM83GA6ND36 823 aa8.8□□□□□ -1
CLPX-202ENST00000558103 EPHA1P21709 976 aa8.8□□□□□ -1
CLPX-202ENST00000558103 DSC3Q14574 896 aa8.8□□□□□ -1
CLPX-202ENST00000558103 FOXD4L6Q3SYB3 417 aaPredicted RBP8.8□□□□□ -1
CLPX-202ENST00000558103 FOXD4L3Q6VB84 417 aaPredicted RBP8.8□□□□□ -1
CLPX-202ENST00000558103 KRT27Q7Z3Y8 459 aa8.8□□□□□ -1
CLPX-202ENST00000558103 CSRNP1Q96S65 589 aa8.8□□□□□ -1
CLPX-202ENST00000558103 BHLHE41Q9C0J9 482 aaPredicted RBP8.8□□□□□ -1
CLPX-202ENST00000558103 POGKQ9P215 609 aa8.8□□□□□ -1
CLPX-202ENST00000558103 GPRASP1Q5JY77 1395 aa8.79□□□□□ -1
CLPX-202ENST00000558103 CDC25BP30305 580 aa8.79□□□□□ -1
CLPX-202ENST00000558103 GATA4P43694 442 aa8.79□□□□□ -1
CLPX-202ENST00000558103 KIAA0319Q5VV43 1072 aa8.79□□□□□ -1
CLPX-202ENST00000558103 FAM117BQ6P1L5 589 aa8.79□□□□□ -1
CLPX-202ENST00000558103 ZSCAN29Q8IWY8 852 aaPredicted RBP8.79□□□□□ -1
CLPX-202ENST00000558103 DCAF11Q8TEB1 546 aa8.79□□□□□ -1
CLPX-202ENST00000558103 BSNDQ8WZ55 320 aa8.79□□□□□ -1
CLPX-202ENST00000558103 HIRIP3Q9BW71 556 aaPredicted RBP8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms