RNA–Protein interactions for RNA: ENST00000558080.1

SPG11-205, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 1 (best)

Gene SPG11, Length 759 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-205ENST00000558080 FAM205AQ6ZU69 1335 aa9.43□□□□□ -0.9
SPG11-205ENST00000558080 KDM4AO75164 1064 aa9.43□□□□□ -0.9
SPG11-205ENST00000558080 UBTFL1P0CB47 393 aaPredicted RBP9.43□□□□□ -0.9
SPG11-205ENST00000558080 RBM5P52756 815 aaKnown RBP eCLIP9.43□□□□□ -0.9
SPG11-205ENST00000558080 BRPF1P55201 1214 aaPredicted RBP9.43□□□□□ -0.9
SPG11-205ENST00000558080 HNRNPUQ00839 825 aaKnown RBP eCLIP9.43□□□□□ -0.9
SPG11-205ENST00000558080 KIF23Q02241 960 aaPredicted RBP9.43□□□□□ -0.9
SPG11-205ENST00000558080 MAP2K5Q13163 448 aa9.43□□□□□ -0.9
SPG11-205ENST00000558080 PRKG1Q13976 671 aa9.43□□□□□ -0.9
SPG11-205ENST00000558080 CFAP100Q494V2 611 aa9.43□□□□□ -0.9
SPG11-205ENST00000558080 VPS37DQ86XT2 251 aa9.43□□□□□ -0.9
SPG11-205ENST00000558080 TDRD7Q8NHU6 1098 aaKnown RBP9.43□□□□□ -0.9
SPG11-205ENST00000558080 ZBED3Q96IU2 234 aaPredicted RBP9.43□□□□□ -0.9
SPG11-205ENST00000558080 USB1Q9BQ65 265 aaKnown RBP9.43□□□□□ -0.9
SPG11-205ENST00000558080 API5Q9BZZ5 524 aaKnown RBP9.43□□□□□ -0.9
SPG11-205ENST00000558080 OTOFQ9HC10 1997 aa9.43□□□□□ -0.9
SPG11-205ENST00000558080 CLRN2A0PK11 232 aa9.42□□□□□ -0.9
SPG11-205ENST00000558080 FRAT2O75474 233 aaPredicted RBP9.42□□□□□ -0.9
SPG11-205ENST00000558080 PDE8BO95263 885 aa9.42□□□□□ -0.9
SPG11-205ENST00000558080 NF2P35240 595 aa9.42□□□□□ -0.9
SPG11-205ENST00000558080 RFX5P48382 616 aaPredicted RBP9.42□□□□□ -0.9
SPG11-205ENST00000558080 FKBP1AP62942 108 aaKnown RBP9.42□□□□□ -0.9
SPG11-205ENST00000558080 CHAF1AQ13111 956 aaPredicted RBP9.42□□□□□ -0.9
SPG11-205ENST00000558080 MFSD14BQ5SR56 506 aa9.42□□□□□ -0.9
SPG11-205ENST00000558080 FBXO33Q7Z6M2 555 aa9.42□□□□□ -0.9
SPG11-205ENST00000558080 APOBEC3FQ8IUX4 373 aaKnown RBP9.42□□□□□ -0.9
SPG11-205ENST00000558080 VGLL2Q8N8G2 317 aa9.42□□□□□ -0.9
SPG11-205ENST00000558080 PRMT6Q96LA8 375 aaPredicted RBP9.42□□□□□ -0.9
SPG11-205ENST00000558080 AOX1Q06278 1338 aa9.41□□□□□ -0.9
SPG11-205ENST00000558080 EYA2O00167 538 aa9.41□□□□□ -0.9
SPG11-205ENST00000558080 WFS1O76024 890 aa9.41□□□□□ -0.9
SPG11-205ENST00000558080 USP46P62068 366 aa9.41□□□□□ -0.9
SPG11-205ENST00000558080 FKBP1BP68106 108 aa9.41□□□□□ -0.9
SPG11-205ENST00000558080 PTPN12Q05209 780 aaKnown RBP9.41□□□□□ -0.9
SPG11-205ENST00000558080 CAVIN4Q5BKX8 364 aa9.41□□□□□ -0.9
SPG11-205ENST00000558080 RASAL3Q86YV0 1011 aa9.41□□□□□ -0.9
SPG11-205ENST00000558080 MTMR14Q8NCE2 650 aa9.41□□□□□ -0.9
SPG11-205ENST00000558080 MRGPRX2Q96LB1 330 aa9.41□□□□□ -0.9
SPG11-205ENST00000558080 SIL1Q9H173 461 aa9.41□□□□□ -0.9
SPG11-205ENST00000558080 VEZTQ9HBM0 779 aa9.41□□□□□ -0.9
SPG11-205ENST00000558080 TTF2Q9UNY4 1162 aaKnown RBP9.41□□□□□ -0.9
SPG11-205ENST00000558080 FZD1Q9UP38 647 aa9.41□□□□□ -0.9
SPG11-205ENST00000558080 LRRFIP2Q9Y608 721 aaKnown RBP9.41□□□□□ -0.9
SPG11-205ENST00000558080 CA12O43570 354 aa9.4□□□□□ -0.9
SPG11-205ENST00000558080 MYO1BO43795 1136 aa9.4□□□□□ -0.9
SPG11-205ENST00000558080 TRPA1O75762 1119 aa9.4□□□□□ -0.9
SPG11-205ENST00000558080 BCAR3O75815 825 aa9.4□□□□□ -0.9
SPG11-205ENST00000558080 FGFR2P21802 821 aa9.4□□□□□ -0.9
SPG11-205ENST00000558080 NFX1Q12986 1120 aaKnown RBP9.4□□□□□ -0.9
SPG11-205ENST00000558080 GRIK5Q16478 980 aa9.4□□□□□ -0.9
SPG11-205ENST00000558080 ATG9AQ7Z3C6 839 aa9.4□□□□□ -0.9
SPG11-205ENST00000558080 ARMC9Q7Z3E5 817 aa9.4□□□□□ -0.9
SPG11-205ENST00000558080 FRAT1Q92837 279 aaPredicted RBP9.4□□□□□ -0.9
SPG11-205ENST00000558080 CSRNP1Q96S65 589 aa9.4□□□□□ -0.9
SPG11-205ENST00000558080 MEIS3Q99687 375 aa9.4□□□□□ -0.9
SPG11-205ENST00000558080 REPIN1Q9BWE0 567 aaKnown RBP9.4□□□□□ -0.9
SPG11-205ENST00000558080 DEFB129Q9H1M3 183 aa9.4□□□□□ -0.9
SPG11-205ENST00000558080 ANGEL1Q9UNK9 670 aaKnown RBP9.4□□□□□ -0.9
SPG11-205ENST00000558080 PA2G4Q9UQ80 394 aaKnown RBP9.4□□□□□ -0.9
SPG11-205ENST00000558080 TNNQ9UQP3 1299 aa9.4□□□□□ -0.9
SPG11-205ENST00000558080 MYO5AQ9Y4I1 1855 aaKnown RBP9.4□□□□□ -0.91
SPG11-205ENST00000558080 LAMB1P07942 1786 aa9.4□□□□□ -0.91
SPG11-205ENST00000558080 KIF16BQ96L93 1317 aa9.39□□□□□ -0.91
SPG11-205ENST00000558080 IFIT1P09914 478 aaKnown RBP9.39□□□□□ -0.91
SPG11-205ENST00000558080 SLC5A1P13866 664 aa9.39□□□□□ -0.91
SPG11-205ENST00000558080 PUM3Q15397 648 aaKnown RBP9.39□□□□□ -0.91
SPG11-205ENST00000558080 INTS3Q68E01 1043 aaKnown RBP9.39□□□□□ -0.91
SPG11-205ENST00000558080 ARHGAP45Q92619 1136 aa9.39□□□□□ -0.91
SPG11-205ENST00000558080 TDRD3Q9H7E2 651 aaKnown RBP9.39□□□□□ -0.91
SPG11-205ENST00000558080 ATP13A2Q9NQ11 1180 aa9.39□□□□□ -0.91
SPG11-205ENST00000558080 RNF186Q9NXI6 227 aa9.39□□□□□ -0.91
SPG11-205ENST00000558080 ZNF70Q9UC06 446 aaPredicted RBP9.39□□□□□ -0.91
SPG11-205ENST00000558080 HDAC5Q9UQL6 1122 aa9.39□□□□□ -0.91
SPG11-205ENST00000558080 ZBED9Q6R2W3 1325 aa9.38□□□□□ -0.91
SPG11-205ENST00000558080 J3QL48 77 aa9.38□□□□□ -0.91
SPG11-205ENST00000558080 IRF6O14896 467 aa9.38□□□□□ -0.91
SPG11-205ENST00000558080 IPO8O15397 1037 aaKnown RBP9.38□□□□□ -0.91
SPG11-205ENST00000558080 CRKP46108 304 aa9.38□□□□□ -0.91
SPG11-205ENST00000558080 NBPF12Q5TAG4 269 aaPredicted RBP9.38□□□□□ -0.91
SPG11-205ENST00000558080 DZIP1LQ8IYY4 767 aaKnown RBP9.38□□□□□ -0.91
SPG11-205ENST00000558080 TBC1D22AQ8WUA7 517 aa9.38□□□□□ -0.91
SPG11-205ENST00000558080 LPIN2Q92539 896 aa9.38□□□□□ -0.91
SPG11-205ENST00000558080 CLUAP1Q96AJ1 413 aa9.38□□□□□ -0.91
SPG11-205ENST00000558080 CEP126Q9P2H0 1117 aa9.38□□□□□ -0.91
SPG11-205ENST00000558080 SERPINA10Q9UK55 444 aa9.38□□□□□ -0.91
SPG11-205ENST00000558080 GTF3C3Q9Y5Q9 886 aa9.38□□□□□ -0.91
SPG11-205ENST00000558080 COL1A1P02452 1464 aaPredicted RBP9.38□□□□□ -0.91
SPG11-205ENST00000558080 SSC5DA1L4H1 1573 aa9.37□□□□□ -0.91
SPG11-205ENST00000558080 TCP10L2B9ZVM9 353 aa9.37□□□□□ -0.91
SPG11-205ENST00000558080 HOXA2O43364 376 aa9.37□□□□□ -0.91
SPG11-205ENST00000558080 CIAO1O76071 339 aa9.37□□□□□ -0.91
SPG11-205ENST00000558080 GNAI3P08754 354 aa9.37□□□□□ -0.91
SPG11-205ENST00000558080 TRIM27P14373 513 aa9.37□□□□□ -0.91
SPG11-205ENST00000558080 RASA3Q14644 834 aa9.37□□□□□ -0.91
SPG11-205ENST00000558080 ATP2B3Q16720 1220 aa9.37□□□□□ -0.91
SPG11-205ENST00000558080 SUPT20HL1Q3ZLR7 823 aa9.37□□□□□ -0.91
SPG11-205ENST00000558080 LDLRAD1Q5T700 205 aa9.37□□□□□ -0.91
SPG11-205ENST00000558080 ATF7IPQ6VMQ6 1270 aa9.37□□□□□ -0.91
SPG11-205ENST00000558080 SLC10A4Q96EP9 437 aa9.37□□□□□ -0.91
SPG11-205ENST00000558080 ABHD8Q96I13 439 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms