RNA–Protein interactions for RNA: ENST00000558036.5

SNRPA1-205, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,108 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-205ENST00000558036 PSMD14O00487 310 aa23.96■■□□□ 1.43
SNRPA1-205ENST00000558036 WDHD1O75717 1129 aaPredicted RBP23.96■■□□□ 1.43
SNRPA1-205ENST00000558036 SLC3A2P08195 630 aaKnown RBP23.96■■□□□ 1.43
SNRPA1-205ENST00000558036 APOA5Q6Q788 366 aa23.96■■□□□ 1.43
SNRPA1-205ENST00000558036 CCDC144CPQ8IYA2 1237 aa23.96■■□□□ 1.43
SNRPA1-205ENST00000558036 NSUN7Q8NE18 718 aaKnown RBP23.96■■□□□ 1.43
SNRPA1-205ENST00000558036 UBAC1Q9BSL1 405 aa23.96■■□□□ 1.43
SNRPA1-205ENST00000558036 LAMB1P07942 1786 aa23.96■■□□□ 1.43
SNRPA1-205ENST00000558036 MICU3Q86XE3 530 aa23.96■■□□□ 1.43
SNRPA1-205ENST00000558036 AMOTL1Q8IY63 956 aa23.96■■□□□ 1.43
SNRPA1-205ENST00000558036 ZDHHC15Q96MV8 337 aa23.96■■□□□ 1.43
SNRPA1-205ENST00000558036 STX6O43752 255 aa23.95■■□□□ 1.42
SNRPA1-205ENST00000558036 MCM4P33991 863 aa23.95■■□□□ 1.42
SNRPA1-205ENST00000558036 CACNB3P54284 484 aa23.95■■□□□ 1.42
SNRPA1-205ENST00000558036 PDE4BQ07343 736 aa23.95■■□□□ 1.42
SNRPA1-205ENST00000558036 SART3Q15020 963 aaKnown RBP23.95■■□□□ 1.42
SNRPA1-205ENST00000558036 NIM1KQ8IY84 436 aa23.95■■□□□ 1.42
SNRPA1-205ENST00000558036 ZBTB12Q9Y330 459 aaPredicted RBP23.95■■□□□ 1.42
SNRPA1-205ENST00000558036 TNKSO95271 1327 aa23.95■■□□□ 1.42
SNRPA1-205ENST00000558036 ORC4O43929 436 aa23.95■■□□□ 1.42
SNRPA1-205ENST00000558036 NMT2O60551 498 aa23.95■■□□□ 1.42
SNRPA1-205ENST00000558036 PCP11498 1178 aaKnown RBP23.95■■□□□ 1.42
SNRPA1-205ENST00000558036 LIFRP42702 1097 aa23.95■■□□□ 1.42
SNRPA1-205ENST00000558036 WTAPQ15007 396 aa23.95■■□□□ 1.42
SNRPA1-205ENST00000558036 FOXD4L6Q3SYB3 417 aaPredicted RBP23.95■■□□□ 1.42
SNRPA1-205ENST00000558036 FOXD4L3Q6VB84 417 aaPredicted RBP23.95■■□□□ 1.42
SNRPA1-205ENST00000558036 ILDR2Q71H61 639 aa23.95■■□□□ 1.42
SNRPA1-205ENST00000558036 SGMS1Q86VZ5 419 aa23.95■■□□□ 1.42
SNRPA1-205ENST00000558036 SPON1Q9HCB6 807 aa23.95■■□□□ 1.42
SNRPA1-205ENST00000558036 ZNRF3Q9ULT6 936 aa23.95■■□□□ 1.42
SNRPA1-205ENST00000558036 NAV1Q8NEY1 1877 aa23.95■■□□□ 1.42
SNRPA1-205ENST00000558036 CDK5RAP2Q96SN8 1893 aa23.95■■□□□ 1.42
SNRPA1-205ENST00000558036 PTPDC1A2A3K4 754 aa23.94■■□□□ 1.42
SNRPA1-205ENST00000558036 NFIAQ12857 509 aa23.94■■□□□ 1.42
SNRPA1-205ENST00000558036 ERICH2A1L162 156 aa23.93■■□□□ 1.42
SNRPA1-205ENST00000558036 CCDC69A6NI79 296 aa23.93■■□□□ 1.42
SNRPA1-205ENST00000558036 LARP1BQ659C4 914 aaKnown RBP23.93■■□□□ 1.42
SNRPA1-205ENST00000558036 RSBN1LQ6PCB5 846 aaPredicted RBP23.93■■□□□ 1.42
SNRPA1-205ENST00000558036 ENAHQ8N8S7 591 aaPredicted RBP23.93■■□□□ 1.42
SNRPA1-205ENST00000558036 ZSCAN10Q96SZ4 725 aaPredicted RBP23.93■■□□□ 1.42
SNRPA1-205ENST00000558036 WDR33Q9C0J8 1336 aaKnown RBP23.93■■□□□ 1.42
SNRPA1-205ENST00000558036 BAG4O95429 457 aaKnown RBP23.93■■□□□ 1.42
SNRPA1-205ENST00000558036 SMARCC2Q8TAQ2 1214 aa23.93■■□□□ 1.42
SNRPA1-205ENST00000558036 GBP4Q96PP9 640 aa23.93■■□□□ 1.42
SNRPA1-205ENST00000558036 SLC12A7Q9Y666 1083 aa23.93■■□□□ 1.42
SNRPA1-205ENST00000558036 ROBO3Q96MS0 1386 aa23.92■■□□□ 1.42
SNRPA1-205ENST00000558036 VPS37CA5D8V6 355 aaPredicted RBP23.92■■□□□ 1.42
SNRPA1-205ENST00000558036 METAP2P50579 478 aaKnown RBP eCLIP23.92■■□□□ 1.42
SNRPA1-205ENST00000558036 RASSF7Q02833 373 aa23.92■■□□□ 1.42
SNRPA1-205ENST00000558036 SEC23AQ15436 765 aa23.92■■□□□ 1.42
SNRPA1-205ENST00000558036 LLPHQ9BRT6 129 aaKnown RBP23.92■■□□□ 1.42
SNRPA1-205ENST00000558036 VPS33BQ9H267 617 aa23.92■■□□□ 1.42
SNRPA1-205ENST00000558036 MKNK2Q9HBH9 465 aa23.92■■□□□ 1.42
SNRPA1-205ENST00000558036 SERPINA10Q9UK55 444 aa23.92■■□□□ 1.42
SNRPA1-205ENST00000558036 ZBTB43O43298 467 aa23.92■■□□□ 1.42
SNRPA1-205ENST00000558036 VIL1P09327 827 aaKnown RBP23.92■■□□□ 1.42
SNRPA1-205ENST00000558036 ADD1P35611 737 aaKnown RBP23.92■■□□□ 1.42
SNRPA1-205ENST00000558036 MRIQ9BWK5 157 aa23.92■■□□□ 1.42
SNRPA1-205ENST00000558036 TSPY2A6NKD2 308 aa23.91■■□□□ 1.42
SNRPA1-205ENST00000558036 CDC27P30260 824 aa23.91■■□□□ 1.42
SNRPA1-205ENST00000558036 HDLBPQ00341 1268 aaKnown RBP23.91■■□□□ 1.42
SNRPA1-205ENST00000558036 IQCA1Q86XH1 822 aa23.91■■□□□ 1.42
SNRPA1-205ENST00000558036 MTMR6Q9Y217 621 aa23.91■■□□□ 1.42
SNRPA1-205ENST00000558036 ZSCAN22P10073 491 aaPredicted RBP23.9■■□□□ 1.42
SNRPA1-205ENST00000558036 FOSBP53539 338 aa23.9■■□□□ 1.42
SNRPA1-205ENST00000558036 CXCL9Q07325 125 aa23.9■■□□□ 1.42
SNRPA1-205ENST00000558036 CFAP100Q494V2 611 aa23.9■■□□□ 1.42
SNRPA1-205ENST00000558036 ZFPM1Q8IX07 1006 aa23.9■■□□□ 1.42
SNRPA1-205ENST00000558036 DDX60LQ5H9U9 1706 aaKnown RBP23.9■■□□□ 1.42
SNRPA1-205ENST00000558036 TFAP4Q01664 338 aa23.9■■□□□ 1.42
SNRPA1-205ENST00000558036 FER1L6Q2WGJ9 1857 aa23.89■■□□□ 1.42
SNRPA1-205ENST00000558036 CPLX1O14810 134 aa23.89■■□□□ 1.42
SNRPA1-205ENST00000558036 PRELPP51888 382 aa23.89■■□□□ 1.42
SNRPA1-205ENST00000558036 TCP10Q12799 353 aa23.89■■□□□ 1.42
SNRPA1-205ENST00000558036 JDP2Q8WYK2 163 aa23.89■■□□□ 1.42
SNRPA1-205ENST00000558036 PRMT6Q96LA8 375 aaPredicted RBP23.89■■□□□ 1.42
SNRPA1-205ENST00000558036 GMLQ99445 158 aa23.89■■□□□ 1.42
SNRPA1-205ENST00000558036 GOLGA8AA7E2F4 631 aa23.89■■□□□ 1.41
SNRPA1-205ENST00000558036 CDC37L1Q7L3B6 337 aa23.89■■□□□ 1.41
SNRPA1-205ENST00000558036 FAM184AQ8NB25 1140 aa23.89■■□□□ 1.41
SNRPA1-205ENST00000558036 MTA3Q9BTC8 594 aa23.89■■□□□ 1.41
SNRPA1-205ENST00000558036 FHDC1Q9C0D6 1143 aaPredicted RBP23.89■■□□□ 1.41
SNRPA1-205ENST00000558036 OSBPL5Q9H0X9 879 aaPredicted RBP23.89■■□□□ 1.41
SNRPA1-205ENST00000558036 TDRD3Q9H7E2 651 aaKnown RBP23.89■■□□□ 1.41
SNRPA1-205ENST00000558036 DHX16O60231 1041 aaKnown RBP23.88■■□□□ 1.41
SNRPA1-205ENST00000558036 FDPSP14324 419 aaKnown RBP23.88■■□□□ 1.41
SNRPA1-205ENST00000558036 CDK8P49336 464 aa23.88■■□□□ 1.41
SNRPA1-205ENST00000558036 IFIT1BQ5T764 474 aaKnown RBP23.88■■□□□ 1.41
SNRPA1-205ENST00000558036 MCTP1Q6DN14 999 aa23.88■■□□□ 1.41
SNRPA1-205ENST00000558036 CLEC17AQ6ZS10 378 aa23.88■■□□□ 1.41
SNRPA1-205ENST00000558036 C16orf86Q6ZW13 317 aa23.88■■□□□ 1.41
SNRPA1-205ENST00000558036 FAM217BQ9NTX9 383 aaPredicted RBP23.88■■□□□ 1.41
SNRPA1-205ENST00000558036 SLURP2P0DP57 97 aa23.87■■□□□ 1.41
SNRPA1-205ENST00000558036 PDCP20941 246 aa23.87■■□□□ 1.41
SNRPA1-205ENST00000558036 SYNE3Q6ZMZ3 975 aa23.87■■□□□ 1.41
SNRPA1-205ENST00000558036 ZNF654Q8IZM8 581 aa23.87■■□□□ 1.41
SNRPA1-205ENST00000558036 NUP133Q8WUM0 1156 aa23.87■■□□□ 1.41
SNRPA1-205ENST00000558036 MYO3BQ8WXR4 1341 aa23.87■■□□□ 1.41
SNRPA1-205ENST00000558036 RASA1P20936 1047 aa23.87■■□□□ 1.41
SNRPA1-205ENST00000558036 FERMT3Q86UX7 667 aa23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms