RNA–Protein interactions for RNA: ENST00000557889.1

CPNE6-205, Transcript of copine 6, humanhuman

TSL 4

Gene CPNE6, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-205ENST00000557889 ARMT1Q9H993 441 aa17.06■□□□□ 0.32
CPNE6-205ENST00000557889 SAP30BPQ9UHR5 308 aaKnown RBP17.06■□□□□ 0.32
CPNE6-205ENST00000557889 TESPA1A2RU30 521 aaPredicted RBP17.05■□□□□ 0.32
CPNE6-205ENST00000557889 SLURP2P0DP57 97 aa17.05■□□□□ 0.32
CPNE6-205ENST00000557889 PPATQ06203 517 aa17.05■□□□□ 0.32
CPNE6-205ENST00000557889 SCYL3Q8IZE3 742 aa17.05■□□□□ 0.32
CPNE6-205ENST00000557889 APPBP2Q92624 585 aa17.05■□□□□ 0.32
CPNE6-205ENST00000557889 FSD1Q9BTV5 496 aa17.05■□□□□ 0.32
CPNE6-205ENST00000557889 PUS7LQ9H0K6 701 aaKnown RBP17.05■□□□□ 0.32
CPNE6-205ENST00000557889 OSBPL3Q9H4L5 887 aa17.05■□□□□ 0.32
CPNE6-205ENST00000557889 RNF186Q9NXI6 227 aa17.05■□□□□ 0.32
CPNE6-205ENST00000557889 FAM196BA6NMK8 535 aa17.04■□□□□ 0.32
CPNE6-205ENST00000557889 HSPA8P11142 646 aaKnown RBP17.04■□□□□ 0.32
CPNE6-205ENST00000557889 GTF2A2P52657 109 aa17.04■□□□□ 0.32
CPNE6-205ENST00000557889 PPIL2Q13356 520 aa17.04■□□□□ 0.32
CPNE6-205ENST00000557889 TTC6Q86TZ1 520 aa17.04■□□□□ 0.32
CPNE6-205ENST00000557889 PLEKHM2Q8IWE5 1019 aa17.04■□□□□ 0.32
CPNE6-205ENST00000557889 CRACR2BQ8N4Y2 399 aaPredicted RBP17.04■□□□□ 0.32
CPNE6-205ENST00000557889 SDR42E1Q8WUS8 393 aa17.04■□□□□ 0.32
CPNE6-205ENST00000557889 EVI5LQ96CN4 794 aa17.04■□□□□ 0.32
CPNE6-205ENST00000557889 MS4A4AQ96JQ5 239 aa17.04■□□□□ 0.32
CPNE6-205ENST00000557889 PICK1Q9NRD5 415 aa17.04■□□□□ 0.32
CPNE6-205ENST00000557889 LAMB1P07942 1786 aa17.04■□□□□ 0.32
CPNE6-205ENST00000557889 IRF6O14896 467 aa17.03■□□□□ 0.32
CPNE6-205ENST00000557889 TRPA1O75762 1119 aa17.03■□□□□ 0.32
CPNE6-205ENST00000557889 LBX1P52954 281 aa17.03■□□□□ 0.32
CPNE6-205ENST00000557889 TICAM2Q86XR7 235 aa17.03■□□□□ 0.32
CPNE6-205ENST00000557889 IFNL1Q8IU54 200 aa17.03■□□□□ 0.32
CPNE6-205ENST00000557889 OSBP2Q969R2 916 aa17.03■□□□□ 0.32
CPNE6-205ENST00000557889 TRIM34Q9BYJ4 488 aa17.03■□□□□ 0.32
CPNE6-205ENST00000557889 EHD4Q9H223 541 aa17.03■□□□□ 0.32
CPNE6-205ENST00000557889 DCP1AQ9NPI6 582 aaPredicted RBP17.03■□□□□ 0.32
CPNE6-205ENST00000557889 PRDM10Q9NQV6 1147 aa17.03■□□□□ 0.32
CPNE6-205ENST00000557889 ATP8A2Q9NTI2 1148 aa17.03■□□□□ 0.32
CPNE6-205ENST00000557889 PRKAB2O43741 272 aa17.02■□□□□ 0.32
CPNE6-205ENST00000557889 ALDH1A1P00352 501 aa17.02■□□□□ 0.32
CPNE6-205ENST00000557889 POLR3DP05423 398 aaPredicted RBP17.02■□□□□ 0.32
CPNE6-205ENST00000557889 PTPRAP18433 802 aa17.02■□□□□ 0.32
CPNE6-205ENST00000557889 CAP2P40123 477 aa17.02■□□□□ 0.32
CPNE6-205ENST00000557889 SNAPC2Q13487 334 aa17.02■□□□□ 0.32
CPNE6-205ENST00000557889 STRBPQ96SI9 672 aaKnown RBP17.02■□□□□ 0.32
CPNE6-205ENST00000557889 DNAJC18Q9H819 358 aa17.02■□□□□ 0.32
CPNE6-205ENST00000557889 MCM9Q9NXL9 1143 aa17.02■□□□□ 0.32
CPNE6-205ENST00000557889 SERPINB13Q9UIV8 391 aa17.02■□□□□ 0.32
CPNE6-205ENST00000557889 SLC4A4Q9Y6R1 1079 aa17.02■□□□□ 0.32
CPNE6-205ENST00000557889 SIPA1L1O43166 1804 aa17.02■□□□□ 0.31
CPNE6-205ENST00000557889 MYH1P12882 1939 aa17.02■□□□□ 0.31
CPNE6-205ENST00000557889 PLCD1P51178 756 aa17.01■□□□□ 0.31
CPNE6-205ENST00000557889 SLC4A8Q2Y0W8 1093 aa17.01■□□□□ 0.31
CPNE6-205ENST00000557889 OTUD7BQ6GQQ9 843 aa17.01■□□□□ 0.31
CPNE6-205ENST00000557889 DDRGK1Q96HY6 314 aa17.01■□□□□ 0.31
CPNE6-205ENST00000557889 TSKSQ9UJT2 592 aa17.01■□□□□ 0.31
CPNE6-205ENST00000557889 KCNH4Q9UQ05 1017 aa17.01■□□□□ 0.31
CPNE6-205ENST00000557889 ZHX2Q9Y6X8 837 aa17.01■□□□□ 0.31
CPNE6-205ENST00000557889 IGF2BP3O00425 579 aaKnown RBP eCLIP17■□□□□ 0.31
CPNE6-205ENST00000557889 CXCL11O14625 94 aa17■□□□□ 0.31
CPNE6-205ENST00000557889 CETPP11597 493 aa17■□□□□ 0.31
CPNE6-205ENST00000557889 RRP1BQ14684 758 aaKnown RBP17■□□□□ 0.31
CPNE6-205ENST00000557889 DDX60LQ5H9U9 1706 aaKnown RBP17■□□□□ 0.31
CPNE6-205ENST00000557889 ZMYM1Q5SVZ6 1142 aa17■□□□□ 0.31
CPNE6-205ENST00000557889 BRI3BPQ8WY22 251 aa17■□□□□ 0.31
CPNE6-205ENST00000557889 PTPN18Q99952 460 aa17■□□□□ 0.31
CPNE6-205ENST00000557889 CFHR5Q9BXR6 569 aa17■□□□□ 0.31
CPNE6-205ENST00000557889 GINM1Q9NU53 330 aa17■□□□□ 0.31
CPNE6-205ENST00000557889 TAOK2Q9UL54 1235 aa17■□□□□ 0.31
CPNE6-205ENST00000557889 DOCK1Q14185 1865 aa16.99■□□□□ 0.31
CPNE6-205ENST00000557889 NAV1Q8NEY1 1877 aa16.99■□□□□ 0.31
CPNE6-205ENST00000557889 CCL15-CCL14A0A0B4J2E2 113 aa16.99■□□□□ 0.31
CPNE6-205ENST00000557889 TRIM6-TRIM34B2RNG4 842 aa16.99■□□□□ 0.31
CPNE6-205ENST00000557889 M0R2C6 588 aa16.99■□□□□ 0.31
CPNE6-205ENST00000557889 GPAA1O43292 621 aa16.99■□□□□ 0.31
CPNE6-205ENST00000557889 GNAT2P19087 354 aa16.99■□□□□ 0.31
CPNE6-205ENST00000557889 CCL15Q16663 113 aa16.99■□□□□ 0.31
CPNE6-205ENST00000557889 TATDN1Q6P1N9 297 aa16.99■□□□□ 0.31
CPNE6-205ENST00000557889 GIMAP6Q6P9H5 292 aa16.99■□□□□ 0.31
CPNE6-205ENST00000557889 TBC1D2Q9BYX2 928 aa16.99■□□□□ 0.31
CPNE6-205ENST00000557889 AFG3L2Q9Y4W6 797 aa16.99■□□□□ 0.31
CPNE6-205ENST00000557889 CENPBP07199 599 aaPredicted RBP16.98■□□□□ 0.31
CPNE6-205ENST00000557889 ASNSP08243 561 aa16.98■□□□□ 0.31
CPNE6-205ENST00000557889 PDE4AP27815 886 aa16.98■□□□□ 0.31
CPNE6-205ENST00000557889 GABPAQ06546 454 aa16.98■□□□□ 0.31
CPNE6-205ENST00000557889 AMOTL1Q8IY63 956 aa16.98■□□□□ 0.31
CPNE6-205ENST00000557889 SEC62Q99442 399 aaKnown RBP16.98■□□□□ 0.31
CPNE6-205ENST00000557889 GSG1L2A8MUP6 293 aa16.97■□□□□ 0.31
CPNE6-205ENST00000557889 USP17L12C9JPN9 530 aa16.97■□□□□ 0.31
CPNE6-205ENST00000557889 USP17L21D6R901 530 aa16.97■□□□□ 0.31
CPNE6-205ENST00000557889 TBC1D8O95759 1140 aa16.97■□□□□ 0.31
CPNE6-205ENST00000557889 C12orf60Q5U649 245 aa16.97■□□□□ 0.31
CPNE6-205ENST00000557889 RILPL2Q969X0 211 aa16.97■□□□□ 0.31
CPNE6-205ENST00000557889 ZCCHC17Q9NP64 241 aaKnown RBP16.97■□□□□ 0.31
CPNE6-205ENST00000557889 USP17L5A8MUK1 530 aa16.96■□□□□ 0.31
CPNE6-205ENST00000557889 PATL2C9JE40 543 aaKnown RBP16.96■□□□□ 0.31
CPNE6-205ENST00000557889 CYP2D6P10635 497 aa16.96■□□□□ 0.31
CPNE6-205ENST00000557889 SHMT1P34896 483 aa16.96■□□□□ 0.31
CPNE6-205ENST00000557889 CERKLQ49MI3 558 aaPredicted RBP16.96■□□□□ 0.31
CPNE6-205ENST00000557889 NOM1Q5C9Z4 860 aaKnown RBP16.96■□□□□ 0.31
CPNE6-205ENST00000557889 COL13A1Q5TAT6 717 aaPredicted RBP16.96■□□□□ 0.31
CPNE6-205ENST00000557889 CTR9Q6PD62 1173 aa16.96■□□□□ 0.31
CPNE6-205ENST00000557889 ZNF280CQ8ND82 737 aa16.96■□□□□ 0.31
CPNE6-205ENST00000557889 HELLSQ9NRZ9 838 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms