RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 SH3BP5O60239 455 aa4.95□□□□□ -1.62
TDP1-217ENST00000557782 KATNA1O75449 491 aa4.95□□□□□ -1.62
TDP1-217ENST00000557782 GOLGA6DP0CG33 693 aa4.95□□□□□ -1.62
TDP1-217ENST00000557782 L1CAMP32004 1257 aa4.95□□□□□ -1.62
TDP1-217ENST00000557782 ZNF143P52747 638 aaPredicted RBP4.95□□□□□ -1.62
TDP1-217ENST00000557782 ATP11AP98196 1134 aa4.95□□□□□ -1.62
TDP1-217ENST00000557782 HNRNPUQ00839 825 aaKnown RBP eCLIP4.95□□□□□ -1.62
TDP1-217ENST00000557782 SLC7A5Q01650 507 aa4.95□□□□□ -1.62
TDP1-217ENST00000557782 ZNF252P-AS1Q0IIN9 211 aa4.95□□□□□ -1.62
TDP1-217ENST00000557782 AP3B2Q13367 1082 aa4.95□□□□□ -1.62
TDP1-217ENST00000557782 PCSK7Q16549 785 aa4.95□□□□□ -1.62
TDP1-217ENST00000557782 HSP90AB4PQ58FF6 505 aa4.95□□□□□ -1.62
TDP1-217ENST00000557782 RNF219Q5W0B1 726 aaPredicted RBP4.95□□□□□ -1.62
TDP1-217ENST00000557782 OVOS1Q6IE37 1185 aa4.95□□□□□ -1.62
TDP1-217ENST00000557782 NLRC3Q7RTR2 1065 aa4.95□□□□□ -1.62
TDP1-217ENST00000557782 EXOC2Q96KP1 924 aa4.95□□□□□ -1.62
TDP1-217ENST00000557782 ARNT2Q9HBZ2 717 aa4.95□□□□□ -1.62
TDP1-217ENST00000557782 GOLGA6AQ9NYA3 693 aa4.95□□□□□ -1.62
TDP1-217ENST00000557782 ZIM2Q9NZV7 527 aa4.95□□□□□ -1.62
TDP1-217ENST00000557782 BCCIPQ9P287 314 aaKnown RBP eCLIP4.95□□□□□ -1.62
TDP1-217ENST00000557782 LTBP3Q9NS15 1303 aa4.95□□□□□ -1.62
TDP1-217ENST00000557782 TRBV23-1A0A0A0MS06 115 aa4.94□□□□□ -1.62
TDP1-217ENST00000557782 TNFRSF10CO14798 259 aa4.94□□□□□ -1.62
TDP1-217ENST00000557782 LDHAP00338 332 aaKnown RBP4.94□□□□□ -1.62
TDP1-217ENST00000557782 NME1P15531 152 aaKnown RBP4.94□□□□□ -1.62
TDP1-217ENST00000557782 SMPD1P17405 629 aa4.94□□□□□ -1.62
TDP1-217ENST00000557782 PTPRAP18433 802 aa4.94□□□□□ -1.62
TDP1-217ENST00000557782 RAB27AP51159 221 aa4.94□□□□□ -1.62
TDP1-217ENST00000557782 PTPN11Q06124 597 aaPredicted RBP4.94□□□□□ -1.62
TDP1-217ENST00000557782 PDE4BQ07343 736 aa4.94□□□□□ -1.62
TDP1-217ENST00000557782 ITKQ08881 620 aa4.94□□□□□ -1.62
TDP1-217ENST00000557782 HSP90AA2PQ14568 343 aaPredicted RBP4.94□□□□□ -1.62
TDP1-217ENST00000557782 LRRC41Q15345 812 aa4.94□□□□□ -1.62
TDP1-217ENST00000557782 ZRSR2Q15696 482 aaKnown RBP4.94□□□□□ -1.62
TDP1-217ENST00000557782 VPS72Q15906 364 aa4.94□□□□□ -1.62
TDP1-217ENST00000557782 ZYXQ15942 572 aaKnown RBP4.94□□□□□ -1.62
TDP1-217ENST00000557782 GNPTABQ3T906 1256 aa4.94□□□□□ -1.62
TDP1-217ENST00000557782 SV2CQ496J9 727 aa4.94□□□□□ -1.62
TDP1-217ENST00000557782 SYCP2LQ5T4T6 812 aa4.94□□□□□ -1.62
TDP1-217ENST00000557782 CEP135Q66GS9 1140 aa4.94□□□□□ -1.62
TDP1-217ENST00000557782 MAP1SQ66K74 1059 aaPredicted RBP4.94□□□□□ -1.62
TDP1-217ENST00000557782 ZBTB46Q86UZ6 589 aa4.94□□□□□ -1.62
TDP1-217ENST00000557782 PASD1Q8IV76 773 aa4.94□□□□□ -1.62
TDP1-217ENST00000557782 WDR66Q8TBY9 1149 aa4.94□□□□□ -1.62
TDP1-217ENST00000557782 STK35Q8TDR2 534 aa4.94□□□□□ -1.62
TDP1-217ENST00000557782 LEO1Q8WVC0 666 aaPredicted RBP4.94□□□□□ -1.62
TDP1-217ENST00000557782 ATG4CQ96DT6 458 aa4.94□□□□□ -1.62
TDP1-217ENST00000557782 MTMR8Q96EF0 704 aa4.94□□□□□ -1.62
TDP1-217ENST00000557782 ACSBG1Q96GR2 724 aa4.94□□□□□ -1.62
TDP1-217ENST00000557782 SMAD5Q99717 465 aaKnown RBP4.94□□□□□ -1.62
TDP1-217ENST00000557782 AARSD1Q9BTE6 412 aaKnown RBP4.94□□□□□ -1.62
TDP1-217ENST00000557782 BSDC1Q9NW68 430 aaPredicted RBP4.94□□□□□ -1.62
TDP1-217ENST00000557782 SLC5A4Q9NY91 659 aa4.94□□□□□ -1.62
TDP1-217ENST00000557782 REV1Q9UBZ9 1251 aa4.94□□□□□ -1.62
TDP1-217ENST00000557782 PCDHB10Q9UN67 800 aa4.94□□□□□ -1.62
TDP1-217ENST00000557782 AKAP10O43572 662 aa4.93□□□□□ -1.62
TDP1-217ENST00000557782 BRINP1O60477 761 aa4.93□□□□□ -1.62
TDP1-217ENST00000557782 PPFIA4O75335 1185 aa4.93□□□□□ -1.62
TDP1-217ENST00000557782 NPTXRO95502 500 aa4.93□□□□□ -1.62
TDP1-217ENST00000557782 EYA4O95677 639 aa4.93□□□□□ -1.62
TDP1-217ENST00000557782 MAPTP10636 758 aaKnown RBP4.93□□□□□ -1.62
TDP1-217ENST00000557782 PLCG1P19174 1290 aa4.93□□□□□ -1.62
TDP1-217ENST00000557782 PAX3P23760 479 aa4.93□□□□□ -1.62
TDP1-217ENST00000557782 SUMO1P63165 101 aaKnown RBP4.93□□□□□ -1.62
TDP1-217ENST00000557782 TNP2Q05952 138 aa4.93□□□□□ -1.62
TDP1-217ENST00000557782 STRN3Q13033 797 aa4.93□□□□□ -1.62
TDP1-217ENST00000557782 PIN1Q13526 163 aaPredicted RBP4.93□□□□□ -1.62
TDP1-217ENST00000557782 SCARF1Q14162 830 aa4.93□□□□□ -1.62
TDP1-217ENST00000557782 ZNF423Q2M1K9 1284 aa4.93□□□□□ -1.62
TDP1-217ENST00000557782 BBS9Q3SYG4 887 aa4.93□□□□□ -1.62
TDP1-217ENST00000557782 FAM209AQ5JX71 171 aa4.93□□□□□ -1.62
TDP1-217ENST00000557782 WIPI1Q5MNZ9 446 aaPredicted RBP4.93□□□□□ -1.62
TDP1-217ENST00000557782 LCE2DQ5TA82 110 aaPredicted RBP4.93□□□□□ -1.62
TDP1-217ENST00000557782 FOXB2Q5VYV0 432 aa4.93□□□□□ -1.62
TDP1-217ENST00000557782 MRPL14Q6P1L8 145 aaKnown RBP4.93□□□□□ -1.62
TDP1-217ENST00000557782 ADAMTSL4Q6UY14 1074 aa4.93□□□□□ -1.62
TDP1-217ENST00000557782 C14orf80Q86SX3 495 aa4.93□□□□□ -1.62
TDP1-217ENST00000557782 SCUBE1Q8IWY4 988 aa4.93□□□□□ -1.62
TDP1-217ENST00000557782 DDX1Q92499 740 aaKnown RBP4.93□□□□□ -1.62
TDP1-217ENST00000557782 POP1Q99575 1024 aaKnown RBP4.93□□□□□ -1.62
TDP1-217ENST00000557782 ZNF700Q9H0M5 742 aa4.93□□□□□ -1.62
TDP1-217ENST00000557782 CNNM2Q9H8M5 875 aa4.93□□□□□ -1.62
TDP1-217ENST00000557782 AASDHPPTQ9NRN7 309 aa4.93□□□□□ -1.62
TDP1-217ENST00000557782 PCDHA4Q9UN74 947 aa4.93□□□□□ -1.62
TDP1-217ENST00000557782 SOX13Q9UN79 622 aa4.93□□□□□ -1.62
TDP1-217ENST00000557782 SNCAIPQ9Y6H5 919 aa4.93□□□□□ -1.62
TDP1-217ENST00000557782 PHLDB1Q86UU1 1377 aa4.92□□□□□ -1.62
TDP1-217ENST00000557782 SLC22A31A6NKX4 558 aa4.92□□□□□ -1.62
TDP1-217ENST00000557782 FIGNL2A6NMB9 653 aa4.92□□□□□ -1.62
TDP1-217ENST00000557782 J3QW42 95 aa4.92□□□□□ -1.62
TDP1-217ENST00000557782 EIF4EBP3O60516 100 aaPredicted RBP4.92□□□□□ -1.62
TDP1-217ENST00000557782 GSTP1P09211 210 aaKnown RBP4.92□□□□□ -1.62
TDP1-217ENST00000557782 ACRP10323 421 aa4.92□□□□□ -1.62
TDP1-217ENST00000557782 ESRRAP11474 423 aaPredicted RBP4.92□□□□□ -1.62
TDP1-217ENST00000557782 EIF2AK2P19525 551 aaKnown RBP4.92□□□□□ -1.62
TDP1-217ENST00000557782 SDSP20132 328 aa4.92□□□□□ -1.62
TDP1-217ENST00000557782 MLLT1Q03111 559 aaPredicted RBP4.92□□□□□ -1.62
TDP1-217ENST00000557782 MTMR1Q13613 665 aa4.92□□□□□ -1.62
TDP1-217ENST00000557782 DHX8Q14562 1220 aaKnown RBP4.92□□□□□ -1.62
TDP1-217ENST00000557782 MLC1Q15049 377 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms